Wall clock time and date at job start Sat Mar 6 2021 15:36:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45205 * 1 3 3 C 1.34225 * 116.99945 * 2 1 4 4 O 1.20826 * 120.00169 * 359.97438 * 3 2 1 5 5 C 1.50696 * 119.99947 * 179.97438 * 3 2 1 6 6 H 1.09002 * 112.90842 * 48.75218 * 5 3 2 7 7 C 1.53777 * 113.61720 * 179.97438 * 5 3 2 8 8 C 1.53776 * 87.08408 * 139.98153 * 7 5 3 9 9 H 1.09004 * 113.61724 * 89.20277 * 8 7 5 10 10 N 1.46499 * 113.61703 * 220.01826 * 8 7 5 11 11 C 1.34777 * 120.00195 * 203.46736 * 10 8 7 12 12 O 1.21613 * 119.99966 * 0.02562 * 11 10 8 13 13 C 1.47380 * 119.99852 * 180.27819 * 11 10 8 14 14 C 1.36415 * 127.19268 * 179.72926 * 13 11 10 15 15 C 1.50704 * 125.80002 * 359.97340 * 14 13 11 16 16 O 1.42905 * 109.46751 * 90.00338 * 15 14 13 17 17 C 1.35900 * 116.99635 * 180.02562 * 16 15 14 18 18 C 1.38729 * 120.05657 * 359.72656 * 17 16 15 19 19 C 1.38150 * 119.94282 * 179.74529 * 18 17 16 20 20 C 1.38265 * 120.05630 * 0.50798 * 19 18 17 21 21 C 1.50698 * 119.94378 * 179.74647 * 20 19 18 22 22 O 1.42907 * 109.47191 * 245.01836 * 21 20 19 23 23 Si 1.86301 * 109.47288 * 5.01988 * 21 20 19 24 24 C 1.38267 * 120.11068 * 359.76717 * 20 19 18 25 25 C 1.38146 * 120.05565 * 359.97438 * 24 20 19 26 26 O 1.33648 * 108.40107 * 179.97438 * 14 13 11 27 27 C 1.34215 * 110.90617 * 359.97438 * 26 14 13 28 28 C 1.34181 * 109.12368 * 359.73012 * 27 26 14 29 29 C 1.53775 * 87.17314 * 334.61044 * 8 7 5 30 30 H 1.09002 * 109.46951 * 60.00045 * 1 2 3 31 31 H 1.08998 * 109.47195 * 179.97438 * 1 2 3 32 32 H 1.08995 * 109.46909 * 300.00346 * 1 2 3 33 33 H 1.08999 * 113.61282 * 25.43315 * 7 5 3 34 34 H 1.09000 * 113.69457 * 254.53988 * 7 5 3 35 35 H 0.97000 * 120.00069 * 23.47464 * 10 8 7 36 36 H 1.08996 * 109.47094 * 210.00056 * 15 14 13 37 37 H 1.08995 * 109.47147 * 330.00483 * 15 14 13 38 38 H 1.08004 * 120.03292 * 359.97438 * 18 17 16 39 39 H 1.08004 * 119.97042 * 180.22559 * 19 18 17 40 40 H 1.09003 * 109.47023 * 125.01941 * 21 20 19 41 41 H 0.96700 * 113.99253 * 60.00048 * 22 21 20 42 42 H 1.48503 * 109.99857 * 58.68075 * 23 21 20 43 43 H 1.48497 * 109.99614 * 180.02562 * 23 21 20 44 44 H 1.07996 * 119.96988 * 179.97438 * 24 20 19 45 45 H 1.07996 * 120.03097 * 179.97438 * 25 24 20 46 46 H 1.08005 * 125.43863 * 180.02562 * 27 26 14 47 47 H 1.08005 * 127.02119 * 180.24364 * 28 27 26 48 48 H 1.09003 * 113.61624 * 139.93706 * 29 8 7 49 49 H 1.09000 * 113.61889 * 270.84024 * 29 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 1 4.0250 0.6358 -0.7540 7 6 4.1078 2.7141 -0.0001 8 6 5.1806 2.2274 0.9882 9 1 6.0813 1.8498 0.5040 10 7 5.4693 3.1843 2.0593 11 6 6.6555 3.1434 2.6979 12 8 7.4863 2.3124 2.3847 13 6 6.9435 4.1021 3.7795 14 6 8.0843 4.1891 4.5223 15 6 9.2973 3.3059 4.3816 16 8 10.2009 3.8845 3.4378 17 6 11.3538 3.2080 3.1927 18 6 11.6127 2.0148 3.8515 19 6 12.7830 1.3264 3.5967 20 6 13.7007 1.8309 2.6939 21 6 14.9792 1.0807 2.4221 22 8 16.0919 1.8583 2.8685 23 14 14.9515 -0.5440 3.3333 24 6 13.4476 3.0228 2.0403 25 6 12.2764 3.7123 2.2876 26 8 7.9436 5.1906 5.3960 27 6 6.7444 5.7782 5.2619 28 6 6.0641 5.1695 4.2785 29 6 4.1927 1.1229 1.3987 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0276 -0.0005 32 1 -0.3633 0.5139 0.8899 33 1 3.4172 3.4406 0.4280 34 1 4.5115 3.0298 -0.9622 35 1 4.8068 3.8473 2.3089 36 1 9.7924 3.2120 5.3481 37 1 8.9903 2.3198 4.0333 38 1 10.8983 1.6225 4.5601 39 1 12.9834 0.3956 4.1065 40 1 15.0713 0.8955 1.3519 41 1 16.0757 2.0615 3.8138 42 1 13.7808 -1.3489 2.9011 43 1 16.2072 -1.2931 3.0740 44 1 14.1662 3.4150 1.3359 45 1 12.0793 4.6434 1.7772 46 1 6.3862 6.6114 5.8485 47 1 5.0720 5.4121 3.9274 48 1 4.6645 0.1542 1.5639 49 1 3.5252 1.4134 2.2101 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_4549634.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:36:27 Heat of formation + Delta-G solvation = -108.069586 kcal Electronic energy + Delta-G solvation = -34796.702851 eV Core-core repulsion = 29852.190841 eV Total energy + Delta-G solvation = -4944.512010 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.149 amu Computer time = 1.56 seconds Orbital eigenvalues (eV) -43.72239 -42.00189 -41.29392 -40.76018 -39.28055 -39.06375 -37.45867 -37.17068 -34.86957 -33.83197 -32.81922 -31.98235 -31.38407 -29.47242 -28.08054 -26.93535 -26.86729 -26.14064 -24.67427 -23.80141 -22.79611 -22.36052 -21.81317 -21.35933 -20.45744 -19.49764 -19.12280 -18.97372 -18.25313 -18.01729 -17.47611 -17.43794 -17.23186 -16.97665 -16.85329 -16.51891 -16.35540 -16.23989 -15.91803 -15.77570 -15.67687 -15.38458 -14.77572 -14.63678 -14.48694 -14.36417 -14.31139 -14.18574 -13.85817 -13.69666 -13.65935 -13.54359 -13.47766 -13.12763 -13.02186 -12.53847 -12.37903 -12.26401 -12.07366 -12.05375 -11.87467 -11.84240 -11.76698 -11.45968 -11.15376 -10.97406 -10.40439 -10.20114 -10.05575 -9.83639 -9.24273 -4.99829 -0.04699 0.26950 0.29410 1.01184 1.04218 1.33574 1.49913 1.65022 1.65224 1.97445 2.05213 2.16076 2.46646 2.64629 3.20658 3.28158 3.34361 3.56589 3.57776 3.63154 3.68756 3.70827 3.74534 3.80439 3.91970 3.95257 3.99764 4.11878 4.24291 4.26890 4.29459 4.42302 4.43491 4.45930 4.49780 4.54280 4.59327 4.63815 4.66331 4.67263 4.79794 4.80309 4.88868 4.95569 5.04533 5.14226 5.24903 5.25560 5.30635 5.42596 5.47697 5.68576 5.88115 6.26196 6.39898 6.62187 6.79992 7.06152 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.364 6.364 3 C 0.472 3.528 4 O -0.536 6.536 5 C -0.105 4.105 6 H 0.151 0.849 7 C -0.119 4.119 8 C 0.126 3.874 9 H 0.116 0.884 10 N -0.699 5.699 11 C 0.587 3.413 12 O -0.567 6.567 13 C -0.226 4.226 14 C 0.043 3.957 15 C 0.135 3.865 16 O -0.323 6.323 17 C 0.125 3.875 18 C -0.204 4.204 19 C -0.074 4.074 20 C -0.162 4.162 21 C -0.069 4.069 22 O -0.556 6.556 23 Si 0.775 3.225 24 C -0.059 4.059 25 C -0.163 4.163 26 O -0.176 6.176 27 C -0.011 4.011 28 C -0.199 4.199 29 C -0.127 4.127 30 H 0.061 0.939 31 H 0.127 0.873 32 H 0.062 0.938 33 H 0.099 0.901 34 H 0.098 0.902 35 H 0.415 0.585 36 H 0.103 0.897 37 H 0.109 0.891 38 H 0.150 0.850 39 H 0.152 0.848 40 H 0.105 0.895 41 H 0.395 0.605 42 H -0.287 1.287 43 H -0.299 1.299 44 H 0.138 0.862 45 H 0.132 0.868 46 H 0.251 0.749 47 H 0.189 0.811 48 H 0.094 0.906 49 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.245 0.184 4.589 6.255 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.280 6.280 3 C 0.316 3.684 4 O -0.425 6.425 5 C -0.125 4.125 6 H 0.169 0.831 7 C -0.157 4.157 8 C 0.021 3.979 9 H 0.134 0.866 10 N -0.350 5.350 11 C 0.375 3.625 12 O -0.448 6.448 13 C -0.231 4.231 14 C -0.010 4.010 15 C 0.060 3.940 16 O -0.237 6.237 17 C 0.080 3.920 18 C -0.223 4.223 19 C -0.091 4.091 20 C -0.162 4.162 21 C -0.179 4.179 22 O -0.365 6.365 23 Si 0.682 3.318 24 C -0.077 4.077 25 C -0.182 4.182 26 O -0.072 6.072 27 C -0.077 4.077 28 C -0.218 4.218 29 C -0.166 4.166 30 H 0.080 0.920 31 H 0.146 0.854 32 H 0.080 0.920 33 H 0.117 0.883 34 H 0.117 0.883 35 H 0.252 0.748 36 H 0.121 0.879 37 H 0.126 0.874 38 H 0.168 0.832 39 H 0.169 0.831 40 H 0.122 0.878 41 H 0.245 0.755 42 H -0.214 1.214 43 H -0.227 1.227 44 H 0.155 0.845 45 H 0.150 0.850 46 H 0.267 0.733 47 H 0.206 0.794 48 H 0.112 0.888 49 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -3.588 -0.745 3.807 5.285 hybrid contribution -1.135 0.671 -0.687 1.487 sum -4.724 -0.075 3.120 5.662 Atomic orbital electron populations 1.23532 0.74990 1.05611 1.02494 1.86523 1.24808 1.33198 1.83460 1.23941 0.92427 0.81024 0.70977 1.90665 1.67844 1.37319 1.46718 1.22446 0.86047 1.01551 1.02411 0.83119 1.23325 0.96475 0.94771 1.01140 1.22447 0.97742 0.89728 0.88026 0.86573 1.45643 1.16693 1.36116 1.36544 1.17431 0.81851 0.82363 0.80808 1.90775 1.47696 1.39518 1.66793 1.21383 0.97286 1.02533 1.01858 1.22079 0.96158 0.90997 0.91783 1.21166 0.84984 0.93892 0.93920 1.86051 1.28320 1.49004 1.60339 1.19169 0.85547 0.91904 0.95397 1.21432 1.00582 0.95847 1.04416 1.21017 0.92740 0.99209 0.96165 1.20349 0.97943 0.97613 1.00309 1.25114 0.84315 1.04134 1.04328 1.86464 1.43555 1.74772 1.31661 0.93806 0.76144 0.72913 0.88974 1.20938 0.95189 0.93704 0.97861 1.20617 0.94280 1.02608 1.00671 1.83796 1.36220 1.37746 1.49412 1.24891 0.82026 0.99952 1.00827 1.23244 1.02516 0.96424 0.99585 1.23444 0.97538 1.01140 0.94488 0.91984 0.85437 0.91952 0.88256 0.88309 0.74822 0.87874 0.87371 0.83238 0.83065 0.87779 0.75517 1.21443 1.22685 0.84464 0.84998 0.73267 0.79400 0.88763 0.89120 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 10.56 113.37 1.20 1.15 16 2 O -0.36 -0.81 10.57 -51.36 -0.54 -1.35 16 3 C 0.47 1.31 7.49 71.23 0.53 1.84 16 4 O -0.54 -4.49 15.65 21.96 0.34 -4.15 16 5 C -0.11 0.33 4.26 -10.96 -0.05 0.28 16 6 H 0.15 -1.05 8.14 -2.39 -0.02 -1.07 16 7 C -0.12 0.44 7.15 31.12 0.22 0.66 16 8 C 0.13 -0.25 4.21 45.51 0.19 -0.06 16 9 H 0.12 0.04 7.50 -2.39 -0.02 0.02 16 10 N -0.70 0.72 5.36 -443.36 -2.38 -1.65 16 11 C 0.59 3.06 7.81 86.65 0.68 3.74 16 12 O -0.57 -6.55 14.46 -4.07 -0.06 -6.61 16 13 C -0.23 -0.74 6.31 -18.99 -0.12 -0.86 16 14 C 0.04 0.19 7.00 25.26 0.18 0.37 16 15 C 0.13 0.53 4.74 71.24 0.34 0.87 16 16 O -0.32 -2.76 10.12 -92.42 -0.94 -3.69 16 17 C 0.12 0.85 6.69 22.51 0.15 1.00 16 18 C -0.20 -0.55 9.04 22.37 0.20 -0.35 16 19 C -0.07 -0.06 8.66 22.26 0.19 0.13 16 20 C -0.16 -0.40 5.35 -19.85 -0.11 -0.50 16 21 C -0.07 -0.08 2.80 71.24 0.20 0.12 16 22 O -0.56 -0.86 12.83 -148.98 -1.91 -2.77 16 23 Si 0.78 -0.83 29.80 68.60 2.04 1.21 16 24 C -0.06 -0.25 9.68 22.25 0.22 -0.04 16 25 C -0.16 -1.03 9.99 22.37 0.22 -0.81 16 26 O -0.18 -0.38 10.52 4.50 0.05 -0.33 16 27 C -0.01 0.05 12.03 66.89 0.80 0.85 16 28 C -0.20 0.69 10.60 23.65 0.25 0.94 16 29 C -0.13 0.41 7.44 31.18 0.23 0.64 16 30 H 0.06 -0.07 8.13 -2.39 -0.02 -0.09 16 31 H 0.13 -0.89 8.14 -2.39 -0.02 -0.91 16 32 H 0.06 -0.09 8.13 -2.39 -0.02 -0.11 16 33 H 0.10 -0.24 7.40 -2.39 -0.02 -0.26 16 34 H 0.10 -0.51 8.14 -2.39 -0.02 -0.53 16 35 H 0.41 -2.38 7.88 -92.71 -0.73 -3.12 16 36 H 0.10 -0.12 7.65 -2.39 -0.02 -0.14 16 37 H 0.11 0.52 6.02 -2.39 -0.01 0.51 16 38 H 0.15 -0.25 6.30 -2.91 -0.02 -0.27 16 39 H 0.15 -0.68 4.90 -2.91 -0.01 -0.70 16 40 H 0.10 0.25 7.96 -2.39 -0.02 0.23 16 41 H 0.39 -2.60 8.70 -74.06 -0.64 -3.24 16 42 H -0.29 -1.14 7.11 99.48 0.71 -0.43 16 43 H -0.30 -1.87 7.11 99.48 0.71 -1.16 16 44 H 0.14 0.35 8.06 -2.91 -0.02 0.33 16 45 H 0.13 0.69 8.06 -2.91 -0.02 0.67 16 46 H 0.25 -3.33 8.06 -2.91 -0.02 -3.36 16 47 H 0.19 -1.88 7.74 -2.91 -0.02 -1.91 16 48 H 0.09 -0.33 8.14 -2.39 -0.02 -0.35 16 49 H 0.09 -0.25 8.10 -2.39 -0.02 -0.27 16 Total: 0.00 -27.34 418.50 1.84 -25.51 By element: Atomic # 1 Polarization: -15.83 SS G_CDS: -0.31 Total: -16.14 kcal Atomic # 6 Polarization: 4.45 SS G_CDS: 5.53 Total: 9.98 kcal Atomic # 7 Polarization: 0.72 SS G_CDS: -2.38 Total: -1.65 kcal Atomic # 8 Polarization: -15.85 SS G_CDS: -3.06 Total: -18.90 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: 2.04 Total: 1.21 kcal Total: -27.34 1.84 -25.51 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_4549634.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.562 kcal (2) G-P(sol) polarization free energy of solvation -27.343 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.905 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.835 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.507 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.070 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.56 seconds