Wall clock time and date at job start Sat Mar 6 2021 15:36:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34227 * 117.00186 * 2 1 4 4 O 1.20827 * 119.99677 * 359.97438 * 3 2 1 5 5 C 1.50696 * 120.00158 * 180.02562 * 3 2 1 6 6 H 1.09004 * 112.84713 * 311.18955 * 5 3 2 7 7 C 1.53775 * 113.61998 * 82.50017 * 5 3 2 8 8 C 1.53783 * 87.08505 * 139.97973 * 7 5 3 9 9 H 1.08994 * 113.68488 * 89.12703 * 8 7 5 10 10 N 1.46494 * 113.61461 * 220.02138 * 8 7 5 11 11 C 1.34779 * 119.99878 * 252.49403 * 10 8 7 12 12 O 1.21276 * 120.00186 * 0.02562 * 11 10 8 13 13 C 1.50701 * 119.99882 * 180.02562 * 11 10 8 14 14 O 1.42898 * 109.46882 * 180.02562 * 13 11 10 15 15 C 1.35996 * 117.00105 * 180.02562 * 14 13 11 16 16 C 1.39156 * 120.07693 * 180.02562 * 15 14 13 17 17 O 1.35998 * 120.07051 * 359.97438 * 16 15 14 18 18 C 1.42898 * 117.00101 * 180.02562 * 17 16 15 19 19 C 1.38564 * 119.85641 * 180.02562 * 16 15 14 20 20 C 1.38246 * 119.99906 * 359.97438 * 19 16 15 21 21 C 1.50699 * 119.92630 * 179.97438 * 20 19 16 22 22 O 1.42907 * 109.46603 * 255.00293 * 21 20 19 23 23 Si 1.86298 * 109.47032 * 14.99597 * 21 20 19 24 24 C 1.38251 * 120.14292 * 0.25868 * 20 19 16 25 25 N 1.48004 * 119.92128 * 179.72386 * 24 20 19 26 26 O 1.21801 * 119.99951 * 179.97438 * 25 24 20 27 27 O 1.21802 * 120.00608 * 359.97438 * 25 24 20 28 28 C 1.38241 * 120.15124 * 359.48566 * 24 20 19 29 29 C 1.53782 * 87.07967 * 334.56775 * 8 7 5 30 30 H 1.08999 * 109.47287 * 59.99972 * 1 2 3 31 31 H 1.08998 * 109.47227 * 179.97438 * 1 2 3 32 32 H 1.09001 * 109.47176 * 299.99685 * 1 2 3 33 33 H 1.09007 * 113.61545 * 25.43017 * 7 5 3 34 34 H 1.09000 * 113.61583 * 254.52989 * 7 5 3 35 35 H 0.97002 * 120.00311 * 72.49722 * 10 8 7 36 36 H 1.08994 * 109.47106 * 60.00410 * 13 11 10 37 37 H 1.08998 * 109.47141 * 300.00111 * 13 11 10 38 38 H 1.08996 * 109.47487 * 59.99776 * 18 17 16 39 39 H 1.08998 * 109.47414 * 180.02562 * 18 17 16 40 40 H 1.09007 * 109.46993 * 300.00029 * 18 17 16 41 41 H 1.08003 * 120.00093 * 179.97438 * 19 16 15 42 42 H 1.08996 * 109.47117 * 135.00206 * 21 20 19 43 43 H 0.96697 * 114.00527 * 59.99993 * 22 21 20 44 44 H 1.48506 * 109.99834 * 58.68765 * 23 21 20 45 45 H 1.48502 * 110.00011 * 180.02562 * 23 21 20 46 46 H 1.07998 * 120.00134 * 180.26541 * 28 24 20 47 47 H 1.08999 * 113.61289 * 139.97337 * 29 8 7 48 48 H 1.08999 * 113.61403 * 270.79966 * 29 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 -0.0006 6 1 4.0239 0.6362 0.7550 7 6 4.1906 1.1237 -1.3977 8 6 5.1807 2.2270 -0.9886 9 1 6.0812 1.8495 -0.5041 10 7 5.4693 3.1833 -2.0601 11 6 6.6671 3.1622 -2.6776 12 8 7.5058 2.3511 -2.3466 13 6 6.9643 4.1463 -3.7795 14 8 8.2871 3.9246 -4.2722 15 6 8.7158 4.7349 -5.2768 16 6 9.9931 4.5748 -5.8051 17 8 10.8159 3.6078 -5.3176 18 6 12.1131 3.5017 -5.9074 19 6 10.4254 5.4033 -6.8282 20 6 9.5880 6.3861 -7.3222 21 6 10.0599 7.2867 -8.4345 22 8 10.3698 8.5768 -7.9037 23 14 11.5830 6.5565 -9.2207 24 6 8.3206 6.5483 -6.7941 25 7 7.4304 7.6060 -7.3226 26 8 6.3135 7.7499 -6.8586 27 8 7.8147 8.3326 -8.2214 28 6 7.8813 5.7217 -5.7769 29 6 4.1077 2.7142 -0.0005 30 1 -0.3634 0.5138 -0.8900 31 1 -0.3633 -1.0276 -0.0005 32 1 -0.3633 0.5138 0.8900 33 1 3.5227 1.4151 -2.2084 34 1 4.6610 0.1544 -1.5633 35 1 4.7984 3.8319 -2.3251 36 1 6.8865 5.1616 -3.3906 37 1 6.2478 4.0118 -4.5898 38 1 12.6515 4.4398 -5.7724 39 1 12.6652 2.6933 -5.4281 40 1 12.0120 3.2909 -6.9721 41 1 11.4165 5.2813 -7.2396 42 1 9.2740 7.3812 -9.1838 43 1 11.0630 8.5687 -7.2296 44 1 11.2822 5.2014 -9.7485 45 1 12.0588 7.4356 -10.3189 46 1 6.8892 5.8478 -5.3690 47 1 4.5111 3.0289 0.9619 48 1 3.4180 3.4416 -0.4287 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_4549636.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:36:31 Heat of formation + Delta-G solvation = -150.698880 kcal Electronic energy + Delta-G solvation = -37136.053705 eV Core-core repulsion = 31743.355136 eV Total energy + Delta-G solvation = -5392.698569 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.143 amu Computer time = 1.60 seconds Orbital eigenvalues (eV) -43.40535 -42.15635 -41.96821 -41.02438 -39.89714 -39.25976 -38.92229 -37.73924 -37.44784 -37.12556 -34.74731 -32.67778 -32.53808 -30.24718 -29.20456 -28.72861 -27.91674 -26.84574 -26.74291 -25.75603 -23.96743 -23.24744 -22.62656 -21.78864 -20.77404 -20.74633 -19.84419 -19.50311 -19.02652 -18.72861 -18.66611 -18.31279 -17.96464 -17.75291 -17.65347 -17.45908 -17.30316 -16.85066 -16.52128 -16.35932 -16.18832 -16.08316 -15.60198 -15.54941 -15.09649 -14.80162 -14.49776 -14.39851 -14.29069 -13.97752 -13.88726 -13.63452 -13.52614 -13.48266 -13.03236 -13.02243 -12.67114 -12.55688 -12.49665 -12.43109 -12.35490 -12.32105 -12.28005 -12.21151 -11.86917 -11.83246 -11.78770 -11.44868 -11.06965 -10.53706 -10.45777 -10.22369 -9.48946 -5.13434 -1.37106 -0.43517 0.15809 0.30305 1.03973 1.12938 1.21584 1.36052 1.57522 1.71373 1.89653 1.90109 1.94059 2.37584 2.97967 3.17368 3.21886 3.26731 3.29967 3.45909 3.51986 3.56124 3.61971 3.74308 3.87947 3.93758 3.95518 4.01497 4.05947 4.11676 4.22798 4.24544 4.27175 4.40151 4.42660 4.47771 4.54959 4.56010 4.61946 4.67461 4.73431 4.81436 4.83272 4.91546 5.02469 5.24396 5.31516 5.39932 5.58905 6.06252 6.35330 6.45676 6.63141 6.71658 7.03468 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.365 6.365 3 C 0.471 3.529 4 O -0.536 6.536 5 C -0.107 4.107 6 H 0.151 0.849 7 C -0.130 4.130 8 C 0.127 3.873 9 H 0.118 0.882 10 N -0.702 5.702 11 C 0.521 3.479 12 O -0.560 6.560 13 C 0.025 3.975 14 O -0.289 6.289 15 C 0.101 3.899 16 C 0.172 3.828 17 O -0.306 6.306 18 C -0.005 4.005 19 C -0.163 4.163 20 C -0.040 4.040 21 C -0.092 4.092 22 O -0.536 6.536 23 Si 0.788 3.212 24 C -0.046 4.046 25 N 0.035 4.965 26 O -0.189 6.189 27 O -0.165 6.165 28 C -0.111 4.111 29 C -0.118 4.118 30 H 0.061 0.939 31 H 0.127 0.873 32 H 0.061 0.939 33 H 0.092 0.908 34 H 0.092 0.908 35 H 0.420 0.580 36 H 0.128 0.872 37 H 0.126 0.874 38 H 0.093 0.907 39 H 0.122 0.878 40 H 0.079 0.921 41 H 0.195 0.805 42 H 0.114 0.886 43 H 0.393 0.607 44 H -0.271 1.271 45 H -0.291 1.291 46 H 0.182 0.818 47 H 0.100 0.900 48 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.380 -4.482 2.768 6.852 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.281 6.281 3 C 0.315 3.685 4 O -0.426 6.426 5 C -0.126 4.126 6 H 0.169 0.831 7 C -0.169 4.169 8 C 0.022 3.978 9 H 0.136 0.864 10 N -0.355 5.355 11 C 0.306 3.694 12 O -0.438 6.438 13 C -0.053 4.053 14 O -0.201 6.201 15 C 0.054 3.946 16 C 0.123 3.877 17 O -0.218 6.218 18 C -0.098 4.098 19 C -0.181 4.181 20 C -0.042 4.042 21 C -0.200 4.200 22 O -0.343 6.343 23 Si 0.690 3.310 24 C -0.131 4.131 25 N 0.548 4.452 26 O -0.399 6.399 27 O -0.379 6.379 28 C -0.130 4.130 29 C -0.156 4.156 30 H 0.080 0.920 31 H 0.145 0.855 32 H 0.080 0.920 33 H 0.110 0.890 34 H 0.111 0.889 35 H 0.258 0.742 36 H 0.146 0.854 37 H 0.143 0.857 38 H 0.112 0.888 39 H 0.140 0.860 40 H 0.098 0.902 41 H 0.211 0.789 42 H 0.131 0.869 43 H 0.242 0.758 44 H -0.197 1.197 45 H -0.218 1.218 46 H 0.199 0.801 47 H 0.118 0.882 48 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges 5.112 -5.712 2.394 8.030 hybrid contribution -2.047 0.984 -0.434 2.312 sum 3.064 -4.728 1.959 5.965 Atomic orbital electron populations 1.23523 0.75045 1.05580 1.02473 1.86522 1.24761 1.33295 1.83475 1.23999 0.92529 0.80986 0.70971 1.90671 1.67880 1.37320 1.46711 1.22439 0.85903 1.01805 1.02451 0.83125 1.23436 0.97647 1.01233 0.94560 1.22436 0.97740 0.89622 0.87973 0.86397 1.45682 1.15478 1.37338 1.37015 1.20272 0.82206 0.84145 0.82732 1.90780 1.47543 1.40114 1.65352 1.22922 0.83787 1.00942 0.97641 1.86298 1.32127 1.53766 1.47921 1.17959 0.91753 0.92864 0.92074 1.18664 0.88387 0.89001 0.91615 1.86334 1.27683 1.48684 1.59074 1.23818 0.79622 1.05954 1.00388 1.21088 1.02239 0.96292 0.98504 1.20231 0.90739 0.96291 0.96952 1.25777 1.10500 0.87026 0.96691 1.86671 1.61653 1.25290 1.60718 0.94384 0.78038 0.76170 0.82407 1.20561 0.92730 0.95777 1.04017 1.43737 1.01012 1.00994 0.99439 1.94506 1.06638 1.76649 1.62111 1.94577 1.78963 1.42118 1.22218 1.20902 1.02420 0.93697 0.96027 1.23342 0.96455 0.94619 1.01231 0.92014 0.85485 0.91974 0.88969 0.88912 0.74180 0.85406 0.85654 0.88824 0.86013 0.90208 0.78907 0.86886 0.75799 1.19718 1.21798 0.80092 0.88184 0.88133 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 10.56 113.37 1.20 1.14 16 2 O -0.36 -0.63 10.56 -51.39 -0.54 -1.18 16 3 C 0.47 0.92 7.48 71.23 0.53 1.46 16 4 O -0.54 -4.13 15.65 21.96 0.34 -3.79 16 5 C -0.11 0.48 4.26 -11.01 -0.05 0.44 16 6 H 0.15 -1.24 8.14 -2.38 -0.02 -1.26 16 7 C -0.13 0.65 7.43 31.12 0.23 0.88 16 8 C 0.13 -0.61 4.24 45.52 0.19 -0.42 16 9 H 0.12 -0.28 7.46 -2.39 -0.02 -0.29 16 10 N -0.70 4.08 5.35 -440.05 -2.36 1.73 16 11 C 0.52 0.02 7.91 87.66 0.69 0.71 16 12 O -0.56 -5.79 16.10 16.02 0.26 -5.54 16 13 C 0.02 -0.12 5.22 71.24 0.37 0.25 16 14 O -0.29 -0.71 9.45 -67.10 -0.63 -1.34 16 15 C 0.10 0.01 6.70 22.57 0.15 0.16 16 16 C 0.17 -0.28 6.70 22.57 0.15 -0.13 16 17 O -0.31 0.34 10.28 -79.66 -0.82 -0.48 16 18 C 0.00 0.05 9.81 113.37 1.11 1.16 16 19 C -0.16 0.92 7.65 22.35 0.17 1.09 16 20 C -0.04 0.03 5.26 -19.86 -0.10 -0.08 16 21 C -0.09 0.00 1.74 71.24 0.12 0.12 16 22 O -0.54 -0.62 11.77 -129.50 -1.52 -2.15 16 23 Si 0.79 -4.34 29.91 68.60 2.05 -2.29 16 24 C -0.05 -0.16 6.85 36.38 0.25 0.09 16 25 N 0.04 0.35 4.45 -46.46 -0.21 0.14 16 26 O -0.19 -2.10 18.44 18.88 0.35 -1.75 16 27 O -0.16 -2.15 14.61 25.13 0.37 -1.79 16 28 C -0.11 0.07 8.54 22.35 0.19 0.26 16 29 C -0.12 0.70 7.15 31.12 0.22 0.92 16 30 H 0.06 -0.09 8.13 -2.39 -0.02 -0.11 16 31 H 0.13 -0.91 8.14 -2.39 -0.02 -0.93 16 32 H 0.06 -0.08 8.13 -2.39 -0.02 -0.10 16 33 H 0.09 -0.43 8.09 -2.38 -0.02 -0.45 16 34 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 35 H 0.42 -4.86 8.73 -92.71 -0.81 -5.67 16 36 H 0.13 -1.35 7.66 -2.39 -0.02 -1.37 16 37 H 0.13 -1.29 7.66 -2.39 -0.02 -1.31 16 38 H 0.09 -1.48 7.66 -2.39 -0.02 -1.49 16 39 H 0.12 -1.49 8.14 -2.39 -0.02 -1.51 16 40 H 0.08 -1.09 7.66 -2.38 -0.02 -1.10 16 41 H 0.19 -2.51 3.36 -2.91 -0.01 -2.52 16 42 H 0.11 0.56 6.09 -2.39 -0.01 0.54 16 43 H 0.39 -3.49 8.70 -74.06 -0.64 -4.14 16 44 H -0.27 0.60 7.11 99.48 0.71 1.31 16 45 H -0.29 -0.76 7.11 99.48 0.71 -0.06 16 46 H 0.18 -0.89 5.85 -2.91 -0.02 -0.91 16 47 H 0.10 -0.74 8.14 -2.39 -0.02 -0.76 16 48 H 0.10 -0.46 7.41 -2.39 -0.02 -0.48 16 Total: 0.00 -35.83 411.63 2.38 -33.45 By element: Atomic # 1 Polarization: -22.73 SS G_CDS: -0.34 Total: -23.07 kcal Atomic # 6 Polarization: 2.62 SS G_CDS: 5.44 Total: 8.06 kcal Atomic # 7 Polarization: 4.43 SS G_CDS: -2.56 Total: 1.87 kcal Atomic # 8 Polarization: -15.80 SS G_CDS: -2.20 Total: -18.01 kcal Atomic # 14 Polarization: -4.34 SS G_CDS: 2.05 Total: -2.29 kcal Total: -35.83 2.38 -33.45 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_4549636.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.252 kcal (2) G-P(sol) polarization free energy of solvation -35.827 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -153.079 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.380 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.447 kcal (6) G-S(sol) free energy of system = (1) + (5) -150.699 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.60 seconds