Wall clock time and date at job start Sat Mar 6 2021 15:36:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34228 * 117.00753 * 2 1 4 4 O 1.20828 * 119.99449 * 0.02562 * 3 2 1 5 5 C 1.50696 * 120.00515 * 179.97438 * 3 2 1 6 6 H 1.09004 * 112.85069 * 311.19859 * 5 3 2 7 7 C 1.53774 * 113.69017 * 82.46085 * 5 3 2 8 8 C 1.53782 * 87.08279 * 139.99339 * 7 5 3 9 9 H 1.09002 * 113.68992 * 89.12540 * 8 7 5 10 10 N 1.46493 * 113.61866 * 220.02044 * 8 7 5 11 11 C 1.34779 * 119.99945 * 252.49787 * 10 8 7 12 12 O 1.21281 * 120.00320 * 359.97438 * 11 10 8 13 13 C 1.50703 * 119.99953 * 180.02562 * 11 10 8 14 14 O 1.42894 * 109.47101 * 179.97438 * 13 11 10 15 15 C 1.35903 * 116.99833 * 180.02562 * 14 13 11 16 16 C 1.38721 * 120.05150 * 179.97438 * 15 14 13 17 17 N 1.47998 * 120.03228 * 359.97438 * 16 15 14 18 18 O 1.21793 * 119.99929 * 180.02562 * 17 16 15 19 19 O 1.21802 * 119.99843 * 359.97438 * 17 16 15 20 20 C 1.38164 * 119.93746 * 179.74698 * 16 15 14 21 21 C 1.38246 * 120.06119 * 0.54457 * 20 16 15 22 22 C 1.50699 * 119.94853 * 179.72505 * 21 20 16 23 23 O 1.42907 * 109.46603 * 64.72999 * 22 21 20 24 24 Si 1.86298 * 109.47032 * 184.72302 * 22 21 20 25 25 C 1.38292 * 120.10779 * 359.45371 * 21 20 16 26 26 C 1.38123 * 120.05274 * 0.27017 * 25 21 20 27 27 C 1.53777 * 87.07964 * 334.57112 * 8 7 5 28 28 H 1.08992 * 109.47885 * 180.02562 * 1 2 3 29 29 H 1.09005 * 109.46823 * 300.00684 * 1 2 3 30 30 H 1.09003 * 109.47089 * 59.99488 * 1 2 3 31 31 H 1.09004 * 113.61544 * 25.44966 * 7 5 3 32 32 H 1.09004 * 113.61675 * 254.54223 * 7 5 3 33 33 H 0.96999 * 119.99883 * 72.49878 * 10 8 7 34 34 H 1.09003 * 109.47373 * 59.99882 * 13 11 10 35 35 H 1.08998 * 109.46838 * 300.00047 * 13 11 10 36 36 H 1.08001 * 119.97169 * 180.28948 * 20 16 15 37 37 H 1.08996 * 109.47117 * 304.72912 * 22 21 20 38 38 H 0.96697 * 114.00527 * 59.99993 * 23 22 21 39 39 H 1.48506 * 109.99834 * 58.68765 * 24 22 21 40 40 H 1.48502 * 110.00011 * 180.02562 * 24 22 21 41 41 H 1.07996 * 119.97442 * 180.25345 * 25 21 20 42 42 H 1.08002 * 120.02349 * 179.97438 * 26 25 21 43 43 H 1.08997 * 113.61729 * 139.97860 * 27 8 7 44 44 H 1.09001 * 113.61587 * 270.88228 * 27 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1959 0.0000 4 8 1.4035 2.2093 0.0005 5 6 3.5664 1.2747 0.0006 6 1 4.0234 0.6363 0.7567 7 6 4.1936 1.1222 -1.3951 8 6 5.1829 2.2258 -0.9849 9 1 6.0824 1.8488 -0.4981 10 7 5.4740 3.1812 -2.0566 11 6 6.6731 3.1593 -2.6716 12 8 7.5113 2.3490 -2.3375 13 6 6.9727 4.1425 -3.7737 14 8 8.2969 3.9210 -4.2627 15 6 8.7274 4.7300 -5.2662 16 6 10.0028 4.5708 -5.7882 17 7 10.8966 3.5198 -5.2525 18 8 12.0163 3.3808 -5.7109 19 8 10.5126 2.7945 -4.3524 20 6 10.4362 5.3911 -6.8120 21 6 9.6042 6.3773 -7.3085 22 6 10.0818 7.2747 -8.4210 23 8 10.2975 6.4974 -9.6006 24 14 8.7955 8.5782 -8.7628 25 6 8.3324 6.5380 -6.7898 26 6 7.8924 5.7168 -5.7701 27 6 4.1080 2.7140 0.0005 28 1 -0.3634 -1.0275 0.0005 29 1 -0.3633 0.5140 0.8900 30 1 -0.3633 0.5139 -0.8900 31 1 3.5274 1.4131 -2.2074 32 1 4.6643 0.1528 -1.5588 33 1 4.8037 3.8295 -2.3235 34 1 6.8941 5.1582 -3.3858 35 1 6.2578 4.0073 -4.5854 36 1 11.4273 5.2646 -7.2220 37 1 11.0153 7.7539 -8.1258 38 1 9.5073 6.0414 -9.9211 39 1 8.5389 9.3730 -7.5349 40 1 9.2542 9.4695 -9.8586 41 1 7.6828 7.3065 -7.1820 42 1 6.8991 5.8430 -5.3651 43 1 4.5094 3.0295 0.9635 44 1 3.4183 3.4399 -0.4301 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_4549638.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:36:35 Heat of formation + Delta-G solvation = -123.726593 kcal Electronic energy + Delta-G solvation = -32300.764979 eV Core-core repulsion = 27383.455828 eV Total energy + Delta-G solvation = -4917.309151 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.128 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -43.28931 -42.03353 -41.70003 -40.80433 -39.67783 -38.90389 -37.58917 -37.44392 -37.33334 -34.70743 -33.45545 -32.25340 -30.25732 -29.13592 -27.80928 -26.89524 -26.81772 -26.35027 -24.16288 -22.94742 -22.51759 -21.73616 -20.71822 -20.50988 -19.76914 -19.22138 -18.90827 -18.63527 -18.38030 -18.09393 -17.97218 -17.57696 -17.42026 -17.15657 -16.48480 -16.34352 -16.21152 -16.00741 -15.64987 -15.55201 -15.12053 -14.69913 -14.49095 -14.29292 -14.01629 -13.96173 -13.78135 -13.58581 -13.48028 -13.21499 -13.00413 -12.69927 -12.54068 -12.36924 -12.32535 -12.27226 -12.23142 -12.19123 -11.97448 -11.84683 -11.80760 -11.42571 -10.99527 -10.82678 -10.55487 -10.17241 -9.79711 -5.00489 -1.30701 -0.23977 0.16402 0.36004 1.05869 1.19990 1.27134 1.44634 1.65339 1.72730 2.02969 2.05194 2.37482 3.12394 3.24218 3.25247 3.33221 3.40216 3.52737 3.62126 3.65725 3.71813 3.76535 3.79578 3.94459 4.03218 4.04047 4.26387 4.28501 4.29328 4.35717 4.50605 4.51710 4.59085 4.64010 4.64854 4.69502 4.83620 4.84639 4.94010 5.06273 5.08153 5.19662 5.33735 5.45158 5.76521 6.42529 6.43971 6.65056 6.74325 7.14157 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.366 6.366 3 C 0.473 3.527 4 O -0.535 6.535 5 C -0.109 4.109 6 H 0.146 0.854 7 C -0.129 4.129 8 C 0.126 3.874 9 H 0.111 0.889 10 N -0.699 5.699 11 C 0.511 3.489 12 O -0.562 6.562 13 C 0.023 3.977 14 O -0.291 6.291 15 C 0.195 3.805 16 C -0.105 4.105 17 N 0.034 4.966 18 O -0.206 6.206 19 O -0.170 6.170 20 C -0.004 4.004 21 C -0.151 4.151 22 C -0.082 4.082 23 O -0.558 6.558 24 Si 0.799 3.201 25 C -0.003 4.003 26 C -0.188 4.188 27 C -0.115 4.115 28 H 0.126 0.874 29 H 0.061 0.939 30 H 0.063 0.937 31 H 0.097 0.903 32 H 0.088 0.912 33 H 0.423 0.577 34 H 0.144 0.856 35 H 0.146 0.854 36 H 0.149 0.851 37 H 0.108 0.892 38 H 0.398 0.602 39 H -0.267 1.267 40 H -0.306 1.306 41 H 0.190 0.810 42 H 0.207 0.793 43 H 0.097 0.903 44 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.622 5.988 -2.615 14.213 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.282 6.282 3 C 0.317 3.683 4 O -0.424 6.424 5 C -0.129 4.129 6 H 0.164 0.836 7 C -0.168 4.168 8 C 0.021 3.979 9 H 0.129 0.871 10 N -0.353 5.353 11 C 0.297 3.703 12 O -0.439 6.439 13 C -0.054 4.054 14 O -0.201 6.201 15 C 0.145 3.855 16 C -0.190 4.190 17 N 0.544 4.456 18 O -0.413 6.413 19 O -0.385 6.385 20 C -0.023 4.023 21 C -0.153 4.153 22 C -0.190 4.190 23 O -0.366 6.366 24 Si 0.703 3.297 25 C -0.021 4.021 26 C -0.207 4.207 27 C -0.153 4.153 28 H 0.144 0.856 29 H 0.080 0.920 30 H 0.082 0.918 31 H 0.115 0.885 32 H 0.106 0.894 33 H 0.261 0.739 34 H 0.161 0.839 35 H 0.164 0.836 36 H 0.166 0.834 37 H 0.126 0.874 38 H 0.248 0.752 39 H -0.193 1.193 40 H -0.234 1.234 41 H 0.207 0.793 42 H 0.224 0.776 43 H 0.115 0.885 44 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges -12.108 7.054 -2.464 14.228 hybrid contribution 0.793 -0.577 0.510 1.106 sum -11.315 6.477 -1.953 13.183 Atomic orbital electron populations 1.23525 0.74997 1.05553 1.02535 1.86527 1.24811 1.33361 1.83465 1.23941 0.92413 0.80986 0.70972 1.90662 1.67825 1.37224 1.46719 1.22431 0.86025 1.01926 1.02472 0.83586 1.23432 0.97619 1.01105 0.94623 1.22375 0.97498 0.89831 0.88205 0.87122 1.45602 1.15372 1.37374 1.36957 1.20512 0.82220 0.84465 0.83136 1.90853 1.47731 1.40199 1.65086 1.23147 0.82841 1.01348 0.98065 1.86468 1.33158 1.53340 1.47129 1.18962 0.90007 0.89835 0.86729 1.20861 0.91561 0.99357 1.07223 1.43895 1.01150 1.01165 0.99384 1.94506 1.06819 1.76992 1.62956 1.94673 1.79353 1.42499 1.21931 1.20845 1.01367 0.90548 0.89580 1.20452 0.95155 0.98483 1.01162 1.25466 1.09847 0.99884 0.83805 1.86535 1.41129 1.67530 1.41404 0.93860 0.82312 0.75627 0.77898 1.21716 0.93377 0.95710 0.91250 1.21823 1.02520 0.95606 1.00727 1.23327 0.96354 0.94537 1.01122 0.85605 0.92002 0.91807 0.88492 0.89373 0.73894 0.83894 0.83632 0.83357 0.87434 0.75159 1.19296 1.23442 0.79307 0.77595 0.88473 0.87651 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.08 10.56 113.37 1.20 1.12 16 2 O -0.37 -0.40 10.56 -51.40 -0.54 -0.95 16 3 C 0.47 0.48 7.49 71.23 0.53 1.01 16 4 O -0.53 -3.29 15.65 21.96 0.34 -2.94 16 5 C -0.11 0.53 4.26 -11.02 -0.05 0.48 16 6 H 0.15 -1.12 8.14 -2.38 -0.02 -1.14 16 7 C -0.13 0.70 7.43 31.12 0.23 0.93 16 8 C 0.13 -0.65 4.24 45.52 0.19 -0.45 16 9 H 0.11 -0.12 7.46 -2.39 -0.02 -0.14 16 10 N -0.70 5.43 5.35 -440.05 -2.36 3.07 16 11 C 0.51 -0.43 7.91 87.66 0.69 0.26 16 12 O -0.56 -7.02 16.10 16.01 0.26 -6.77 16 13 C 0.02 -0.20 5.22 71.24 0.37 0.17 16 14 O -0.29 -0.94 7.68 -63.43 -0.49 -1.43 16 15 C 0.19 -0.06 6.67 22.51 0.15 0.09 16 16 C -0.10 -0.68 6.87 36.48 0.25 -0.43 16 17 N 0.03 0.56 4.45 -46.24 -0.21 0.35 16 18 O -0.21 -3.82 18.45 18.89 0.35 -3.47 16 19 O -0.17 -3.55 17.24 25.60 0.44 -3.11 16 20 C 0.00 -0.01 9.18 22.25 0.20 0.20 16 21 C -0.15 0.91 5.35 -19.85 -0.11 0.80 16 22 C -0.08 0.51 2.80 71.24 0.20 0.71 16 23 O -0.56 2.11 12.83 -148.98 -1.91 0.20 16 24 Si 0.80 -8.23 29.80 68.60 2.04 -6.18 16 25 C 0.00 0.04 8.66 22.26 0.19 0.23 16 26 C -0.19 2.21 9.04 22.36 0.20 2.41 16 27 C -0.12 0.79 7.15 31.12 0.22 1.01 16 28 H 0.13 -0.98 8.14 -2.39 -0.02 -1.00 16 29 H 0.06 -0.14 8.13 -2.38 -0.02 -0.16 16 30 H 0.06 -0.18 8.13 -2.39 -0.02 -0.20 16 31 H 0.10 -0.61 8.10 -2.38 -0.02 -0.63 16 32 H 0.09 -0.38 8.14 -2.39 -0.02 -0.39 16 33 H 0.42 -6.50 8.73 -92.71 -0.81 -7.31 16 34 H 0.14 -2.45 7.66 -2.39 -0.02 -2.47 16 35 H 0.15 -2.56 7.66 -2.39 -0.02 -2.58 16 36 H 0.15 0.57 7.61 -2.91 -0.02 0.54 16 37 H 0.11 -0.44 7.96 -2.39 -0.02 -0.46 16 38 H 0.40 -5.07 8.70 -74.06 -0.64 -5.71 16 39 H -0.27 2.06 7.11 99.48 0.71 2.76 16 40 H -0.31 0.12 7.11 99.48 0.71 0.83 16 41 H 0.19 -3.87 4.90 -2.91 -0.01 -3.88 16 42 H 0.21 -4.52 6.30 -2.91 -0.02 -4.54 16 43 H 0.10 -0.76 8.14 -2.39 -0.02 -0.78 16 44 H 0.11 -0.71 7.41 -2.39 -0.02 -0.73 16 Total: 0.00 -42.74 386.49 2.10 -40.64 By element: Atomic # 1 Polarization: -27.65 SS G_CDS: -0.32 Total: -27.97 kcal Atomic # 6 Polarization: 4.06 SS G_CDS: 4.49 Total: 8.55 kcal Atomic # 7 Polarization: 5.99 SS G_CDS: -2.56 Total: 3.42 kcal Atomic # 8 Polarization: -16.91 SS G_CDS: -1.55 Total: -18.46 kcal Atomic # 14 Polarization: -8.23 SS G_CDS: 2.04 Total: -6.18 kcal Total: -42.74 2.10 -40.64 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_4549638.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.085 kcal (2) G-P(sol) polarization free energy of solvation -42.741 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.825 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.099 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.642 kcal (6) G-S(sol) free energy of system = (1) + (5) -123.727 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds