Wall clock time and date at job start Sat Mar 6 2021 15:36:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34224 * 117.00412 * 2 1 4 4 O 1.20826 * 119.99758 * 0.02562 * 3 2 1 5 5 C 1.50699 * 120.00561 * 180.02562 * 3 2 1 6 6 H 1.09006 * 112.90384 * 311.25349 * 5 3 2 7 7 C 1.53780 * 113.61206 * 82.49981 * 5 3 2 8 8 C 1.53787 * 87.07820 * 139.98767 * 7 5 3 9 9 H 1.08991 * 113.69481 * 89.12860 * 8 7 5 10 10 N 1.46499 * 113.61107 * 220.02017 * 8 7 5 11 11 C 1.34770 * 120.00191 * 252.49035 * 10 8 7 12 12 O 1.21282 * 119.99943 * 0.02562 * 11 10 8 13 13 C 1.50699 * 120.00519 * 179.97438 * 11 10 8 14 14 F 1.39904 * 109.46727 * 60.00414 * 13 11 10 15 15 F 1.39898 * 109.47369 * 300.00785 * 13 11 10 16 16 O 1.42897 * 109.47708 * 180.02562 * 13 11 10 17 17 C 1.35895 * 117.00208 * 180.02562 * 16 13 11 18 18 C 1.38735 * 120.05238 * 180.02562 * 17 16 13 19 19 C 1.38147 * 119.94145 * 180.02562 * 18 17 16 20 20 C 1.38267 * 120.05771 * 0.02731 * 19 18 17 21 21 C 1.50699 * 119.94534 * 179.97438 * 20 19 18 22 22 O 1.42895 * 109.47158 * 299.99634 * 21 20 19 23 23 Si 1.86300 * 109.46944 * 180.02562 * 21 20 19 24 24 C 1.38271 * 120.10847 * 0.24836 * 20 19 18 25 25 C 1.38146 * 120.05540 * 359.45178 * 24 20 19 26 26 C 1.53777 * 113.61877 * 180.02562 * 5 3 2 27 27 H 1.08993 * 109.47100 * 299.99944 * 1 2 3 28 28 H 1.09000 * 109.47039 * 59.99980 * 1 2 3 29 29 H 1.08999 * 109.47030 * 179.97438 * 1 2 3 30 30 H 1.08999 * 113.61476 * 25.44085 * 7 5 3 31 31 H 1.09001 * 113.61711 * 254.53013 * 7 5 3 32 32 H 0.97004 * 119.99918 * 72.49965 * 10 8 7 33 33 H 1.07994 * 120.03351 * 0.04968 * 18 17 16 34 34 H 1.07997 * 119.97419 * 179.97438 * 19 18 17 35 35 H 1.09000 * 109.47247 * 60.00087 * 21 20 19 36 36 H 0.96698 * 114.00355 * 300.00487 * 22 21 20 37 37 H 1.48506 * 110.00048 * 180.02562 * 23 21 20 38 38 H 1.48502 * 109.99996 * 301.31619 * 23 21 20 39 39 H 1.08003 * 119.96765 * 179.70258 * 24 20 19 40 40 H 1.08003 * 120.02771 * 180.29373 * 25 24 20 41 41 H 1.09001 * 113.61151 * 105.46641 * 26 5 3 42 42 H 1.08997 * 113.61432 * 334.56841 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2092 0.0005 5 6 3.5664 1.2748 -0.0006 6 1 4.0250 0.6357 0.7540 7 6 4.1905 1.1237 -1.3979 8 6 5.1808 2.2269 -0.9886 9 1 6.0813 1.8495 -0.5042 10 7 5.4694 3.1833 -2.0601 11 6 6.6671 3.1622 -2.6777 12 8 7.5058 2.3511 -2.3467 13 6 6.9638 4.1456 -3.7803 14 9 6.8635 5.4491 -3.2820 15 9 6.0442 3.9719 -4.8202 16 8 8.2868 3.9241 -4.2730 17 6 8.7146 4.7333 -5.2774 18 6 9.9883 4.5734 -5.8037 19 6 10.4211 5.3976 -6.8244 20 6 9.5864 6.3817 -7.3210 21 6 10.0613 7.2798 -8.4341 22 8 11.2225 7.9945 -8.0068 23 14 8.7146 8.4900 -8.8730 24 6 8.3186 6.5467 -6.7943 25 6 7.8788 5.7211 -5.7778 26 6 4.1079 2.7141 0.0001 27 1 -0.3633 0.5138 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 3.5226 1.4153 -2.2083 31 1 4.6609 0.1544 -1.5635 32 1 4.7985 3.8319 -2.3250 33 1 10.6407 3.8050 -5.4162 34 1 11.4126 5.2739 -7.2342 35 1 10.3070 6.6764 -9.3080 36 1 11.0771 8.5536 -7.2314 37 1 9.1703 9.3811 -9.9700 38 1 7.4905 7.7590 -9.2884 39 1 7.6702 7.3192 -7.1807 40 1 6.8868 5.8473 -5.3699 41 1 4.5113 3.0283 0.9627 42 1 3.4173 3.4406 -0.4280 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_4549640.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:36:39 Heat of formation + Delta-G solvation = -217.845045 kcal Electronic energy + Delta-G solvation = -31640.100708 eV Core-core repulsion = 26610.818759 eV Total energy + Delta-G solvation = -5029.281950 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.115 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -50.90083 -48.87195 -42.08628 -41.42413 -41.08823 -39.54311 -39.08787 -37.47078 -37.23964 -35.05918 -32.45539 -32.02715 -29.83233 -28.92625 -26.94193 -26.88689 -26.12170 -24.53884 -23.11758 -22.55746 -22.16761 -21.03956 -20.54694 -19.70956 -19.66422 -19.00779 -18.53346 -18.08517 -17.59860 -17.46139 -17.23998 -16.82174 -16.49048 -16.28979 -16.24443 -16.05663 -15.80542 -15.66774 -15.43617 -15.35453 -15.13007 -15.11557 -14.54262 -14.44091 -14.36425 -14.32727 -14.22818 -13.72843 -13.60924 -13.59008 -13.05904 -13.03074 -12.64794 -12.43192 -12.38241 -12.14903 -11.91252 -11.88239 -11.85329 -11.57981 -11.43867 -10.53163 -10.47314 -10.19787 -9.58560 -5.01396 0.01047 0.14911 0.44501 0.59753 1.05437 1.29968 1.61548 1.62857 1.72751 1.95155 2.02644 2.45475 2.76152 3.15465 3.19391 3.26928 3.48520 3.53689 3.54395 3.64732 3.71104 3.74333 3.98940 4.08720 4.20538 4.25362 4.28068 4.38884 4.39677 4.47623 4.51067 4.58310 4.68301 4.73914 4.79920 4.82071 4.89587 4.90304 5.03734 5.21395 5.33836 5.34138 5.38003 5.79631 5.84245 6.40400 6.63563 6.76840 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.363 6.363 3 C 0.470 3.530 4 O -0.536 6.536 5 C -0.104 4.104 6 H 0.157 0.843 7 C -0.131 4.131 8 C 0.122 3.878 9 H 0.134 0.866 10 N -0.678 5.678 11 C 0.521 3.479 12 O -0.502 6.502 13 C 0.432 3.568 14 F -0.170 7.170 15 F -0.173 7.173 16 O -0.304 6.304 17 C 0.086 3.914 18 C -0.135 4.135 19 C -0.058 4.058 20 C -0.142 4.142 21 C -0.068 4.068 22 O -0.554 6.554 23 Si 0.771 3.229 24 C -0.078 4.078 25 C -0.194 4.194 26 C -0.118 4.118 27 H 0.062 0.938 28 H 0.061 0.939 29 H 0.127 0.873 30 H 0.092 0.908 31 H 0.101 0.899 32 H 0.423 0.577 33 H 0.146 0.854 34 H 0.150 0.850 35 H 0.112 0.888 36 H 0.396 0.604 37 H -0.298 1.298 38 H -0.285 1.285 39 H 0.153 0.847 40 H 0.142 0.858 41 H 0.107 0.893 42 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.079 0.264 3.019 4.320 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.279 6.279 3 C 0.315 3.685 4 O -0.426 6.426 5 C -0.123 4.123 6 H 0.175 0.825 7 C -0.169 4.169 8 C 0.019 3.981 9 H 0.151 0.849 10 N -0.331 5.331 11 C 0.299 3.701 12 O -0.375 6.375 13 C 0.355 3.645 14 F -0.151 7.151 15 F -0.154 7.154 16 O -0.221 6.221 17 C 0.043 3.957 18 C -0.153 4.153 19 C -0.076 4.076 20 C -0.142 4.142 21 C -0.178 4.178 22 O -0.362 6.362 23 Si 0.677 3.323 24 C -0.096 4.096 25 C -0.212 4.212 26 C -0.156 4.156 27 H 0.080 0.920 28 H 0.079 0.921 29 H 0.145 0.855 30 H 0.111 0.889 31 H 0.120 0.880 32 H 0.261 0.739 33 H 0.163 0.837 34 H 0.167 0.833 35 H 0.129 0.871 36 H 0.246 0.754 37 H -0.226 1.226 38 H -0.212 1.212 39 H 0.170 0.830 40 H 0.159 0.841 41 H 0.126 0.874 42 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -2.911 -0.181 2.236 3.675 hybrid contribution -0.697 -0.041 -0.460 0.836 sum -3.608 -0.222 1.775 4.028 Atomic orbital electron populations 1.23522 0.75049 1.05579 1.02464 1.86519 1.24736 1.33239 1.83450 1.23977 0.92535 0.81002 0.71007 1.90677 1.67897 1.37346 1.46678 1.22420 0.85977 1.01604 1.02335 0.82521 1.23467 0.97420 1.01187 0.94864 1.22822 0.98869 0.89267 0.87183 0.84871 1.45782 1.13934 1.37098 1.36279 1.19374 0.84343 0.83976 0.82415 1.90858 1.46634 1.37217 1.62808 1.21823 0.78188 0.80753 0.83759 1.93201 1.95524 1.39006 1.87366 1.93196 1.66889 1.95070 1.60292 1.86642 1.28518 1.56307 1.50594 1.19233 0.95411 0.91807 0.89239 1.20707 0.93378 1.02607 0.98654 1.21049 1.00233 0.92441 0.93893 1.20494 0.94824 0.99091 0.99809 1.25106 0.97217 0.98598 0.96905 1.86471 1.34118 1.63033 1.52560 0.93778 0.74115 0.79556 0.84842 1.21024 0.95399 0.98383 0.94749 1.21609 1.00832 0.97663 1.01096 1.23382 0.96106 0.94912 1.01238 0.91954 0.92051 0.85495 0.88917 0.88036 0.73902 0.83662 0.83267 0.87068 0.75403 1.22559 1.21233 0.82958 0.84089 0.87402 0.88116 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 10.56 113.37 1.20 1.12 16 2 O -0.36 -0.25 10.56 -51.35 -0.54 -0.79 16 3 C 0.47 0.37 7.48 71.24 0.53 0.90 16 4 O -0.54 -3.63 15.65 21.97 0.34 -3.29 16 5 C -0.10 0.65 4.26 -11.02 -0.05 0.60 16 6 H 0.16 -1.66 8.14 -2.38 -0.02 -1.68 16 7 C -0.13 0.84 7.43 31.12 0.23 1.07 16 8 C 0.12 -0.74 4.24 45.53 0.19 -0.55 16 9 H 0.13 -0.73 7.46 -2.39 -0.02 -0.75 16 10 N -0.68 2.80 5.35 -439.99 -2.36 0.44 16 11 C 0.52 1.37 7.34 87.66 0.64 2.01 16 12 O -0.50 -4.60 16.10 16.00 0.26 -4.34 16 13 C 0.43 1.37 2.05 71.24 0.15 1.52 16 14 F -0.17 -0.23 15.29 44.97 0.69 0.46 16 15 F -0.17 -0.37 15.30 44.97 0.69 0.32 16 16 O -0.30 -2.28 9.60 -73.34 -0.70 -2.98 16 17 C 0.09 0.48 6.48 22.51 0.15 0.62 16 18 C -0.14 -0.46 9.99 22.37 0.22 -0.24 16 19 C -0.06 -0.07 9.60 22.25 0.21 0.15 16 20 C -0.14 -0.01 5.39 -19.85 -0.11 -0.12 16 21 C -0.07 0.09 2.82 71.24 0.20 0.29 16 22 O -0.55 0.41 12.76 -148.98 -1.90 -1.49 16 23 Si 0.77 -2.04 29.78 68.60 2.04 0.00 16 24 C -0.08 0.02 8.66 22.26 0.19 0.21 16 25 C -0.19 -0.53 8.26 22.37 0.18 -0.34 16 26 C -0.12 0.86 7.16 31.13 0.22 1.08 16 27 H 0.06 -0.13 8.13 -2.39 -0.02 -0.15 16 28 H 0.06 -0.13 8.13 -2.39 -0.02 -0.15 16 29 H 0.13 -0.99 8.14 -2.39 -0.02 -1.01 16 30 H 0.09 -0.51 8.09 -2.39 -0.02 -0.53 16 31 H 0.10 -0.73 8.14 -2.39 -0.02 -0.75 16 32 H 0.42 -3.50 8.73 -92.71 -0.81 -4.31 16 33 H 0.15 0.22 8.06 -2.91 -0.02 0.20 16 34 H 0.15 -0.19 8.06 -2.91 -0.02 -0.22 16 35 H 0.11 -0.06 7.96 -2.39 -0.02 -0.08 16 36 H 0.40 -3.40 8.70 -74.06 -0.64 -4.04 16 37 H -0.30 -1.45 7.11 99.48 0.71 -0.75 16 38 H -0.29 -0.59 7.11 99.48 0.71 0.12 16 39 H 0.15 -0.74 4.87 -2.91 -0.01 -0.75 16 40 H 0.14 0.13 5.10 -2.91 -0.01 0.12 16 41 H 0.11 -1.02 8.14 -2.39 -0.02 -1.04 16 42 H 0.10 -0.55 7.41 -2.39 -0.02 -0.57 16 Total: 0.00 -22.03 369.62 2.38 -19.65 By element: Atomic # 1 Polarization: -16.02 SS G_CDS: -0.31 Total: -16.32 kcal Atomic # 6 Polarization: 4.16 SS G_CDS: 4.17 Total: 8.33 kcal Atomic # 7 Polarization: 2.80 SS G_CDS: -2.36 Total: 0.44 kcal Atomic # 8 Polarization: -10.34 SS G_CDS: -2.55 Total: -12.89 kcal Atomic # 9 Polarization: -0.59 SS G_CDS: 1.38 Total: 0.78 kcal Atomic # 14 Polarization: -2.04 SS G_CDS: 2.04 Total: 0.00 kcal Total: -22.03 2.38 -19.65 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_4549640.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -198.195 kcal (2) G-P(sol) polarization free energy of solvation -22.034 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -220.228 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.383 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.650 kcal (6) G-S(sol) free energy of system = (1) + (5) -217.845 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds