Wall clock time and date at job start Sat Mar 6 2021 15:36:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45207 * 1 3 3 C 1.34231 * 116.99790 * 2 1 4 4 O 1.20830 * 120.00086 * 0.02562 * 3 2 1 5 5 C 1.50699 * 119.99711 * 179.97438 * 3 2 1 6 6 H 1.08991 * 112.85105 * 48.80538 * 5 3 2 7 7 C 1.53779 * 113.60999 * 179.97438 * 5 3 2 8 8 C 1.53778 * 87.07901 * 140.06605 * 7 5 3 9 9 H 1.09003 * 113.61530 * 89.20202 * 8 7 5 10 10 N 1.46507 * 113.61355 * 220.01814 * 8 7 5 11 11 C 1.34780 * 119.99703 * 203.47205 * 10 8 7 12 12 O 1.21548 * 120.00481 * 359.97438 * 11 10 8 13 13 C 1.47843 * 119.99669 * 179.97438 * 11 10 8 14 14 C 1.39557 * 120.14562 * 179.97438 * 13 11 10 15 15 C 1.50705 * 120.07033 * 0.02562 * 14 13 11 16 16 O 1.42902 * 109.46904 * 179.97438 * 15 14 13 17 17 C 1.35904 * 116.99770 * 180.02562 * 16 15 14 18 18 C 1.38713 * 120.05359 * 180.02562 * 17 16 15 19 19 C 1.38169 * 119.94095 * 180.02562 * 18 17 16 20 20 C 1.50695 * 119.96903 * 180.02562 * 19 18 17 21 21 O 1.42899 * 109.47574 * 64.99717 * 20 19 18 22 22 Si 1.86305 * 109.47210 * 184.99893 * 20 19 18 23 23 C 1.38240 * 120.05665 * 359.97438 * 19 18 17 24 24 C 1.38292 * 120.11185 * 359.97438 * 23 19 18 25 25 C 1.38119 * 120.05412 * 359.76495 * 24 23 19 26 26 C 1.37972 * 119.85610 * 179.97438 * 14 13 11 27 27 C 1.38335 * 120.14647 * 0.02562 * 26 14 13 28 28 C 1.38385 * 120.29153 * 359.97438 * 27 26 14 29 29 C 1.37942 * 120.14390 * 0.02562 * 28 27 26 30 30 C 1.53775 * 87.17261 * 334.60934 * 8 7 5 31 31 H 1.09000 * 109.47032 * 60.00270 * 1 2 3 32 32 H 1.08992 * 109.46735 * 180.02562 * 1 2 3 33 33 H 1.09004 * 109.47193 * 299.99952 * 1 2 3 34 34 H 1.09003 * 113.62007 * 25.52111 * 7 5 3 35 35 H 1.08999 * 113.69306 * 254.62702 * 7 5 3 36 36 H 0.96996 * 120.00437 * 23.47184 * 10 8 7 37 37 H 1.08995 * 109.47319 * 299.97328 * 15 14 13 38 38 H 1.09004 * 109.46798 * 59.97738 * 15 14 13 39 39 H 1.07998 * 120.03071 * 359.97438 * 18 17 16 40 40 H 1.09008 * 109.46993 * 304.99773 * 20 19 18 41 41 H 0.96699 * 114.00741 * 180.02562 * 21 20 19 42 42 H 1.48498 * 109.99815 * 300.00120 * 22 20 19 43 43 H 1.48501 * 109.99735 * 61.31703 * 22 20 19 44 44 H 1.07998 * 119.94577 * 179.97438 * 23 19 18 45 45 H 1.08001 * 119.96673 * 180.02562 * 24 23 19 46 46 H 1.08001 * 120.02554 * 180.27165 * 25 24 23 47 47 H 1.08004 * 119.93191 * 179.97438 * 26 14 13 48 48 H 1.08003 * 119.85732 * 180.02562 * 27 26 14 49 49 H 1.07998 * 119.92699 * 179.75054 * 28 27 26 50 50 H 1.07993 * 120.07351 * 179.97438 * 29 28 27 51 51 H 1.08994 * 113.61625 * 139.94247 * 30 8 7 52 52 H 1.09005 * 113.61320 * 270.84252 * 30 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0239 0.6363 -0.7549 7 6 4.1077 2.7142 -0.0001 8 6 5.1819 2.2270 0.9865 9 1 6.0819 1.8497 0.5008 10 7 5.4720 3.1834 2.0577 11 6 6.6591 3.1422 2.6946 12 8 7.4888 2.3113 2.3807 13 6 6.9520 4.1077 3.7752 14 6 8.1799 4.0675 4.4372 15 6 9.2122 3.0394 4.0518 16 8 10.3742 3.2022 4.8675 17 6 11.4078 2.3478 4.6465 18 6 12.5664 2.4488 5.4025 19 6 13.6159 1.5793 5.1755 20 6 14.8747 1.6881 5.9969 21 8 14.5809 1.3829 7.3616 22 14 16.1434 0.4864 5.3510 23 6 13.5118 0.6090 4.1964 24 6 12.3574 0.5056 3.4420 25 6 11.3033 1.3689 3.6687 26 6 8.4472 4.9718 5.4444 27 6 7.5010 5.9165 5.7990 28 6 6.2813 5.9619 5.1467 29 6 6.0015 5.0636 4.1379 30 6 4.1945 1.1222 1.3977 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3632 -1.0276 0.0005 33 1 -0.3634 0.5138 0.8900 34 1 3.4177 3.4406 0.4294 35 1 4.5099 3.0304 -0.9626 36 1 4.8098 3.8463 2.3086 37 1 8.8023 2.0402 4.1987 38 1 9.4825 3.1709 3.0040 39 1 12.6483 3.2069 6.1673 40 1 15.2670 2.7027 5.9278 41 1 15.3468 1.4336 7.9498 42 1 15.6205 -0.9007 5.4397 43 1 16.4811 0.8127 3.9423 44 1 14.3334 -0.0694 4.0202 45 1 12.2784 -0.2535 2.6779 46 1 10.4003 1.2850 3.0823 47 1 9.3970 4.9415 5.9578 48 1 7.7153 6.6224 6.5879 49 1 5.5453 6.6993 5.4310 50 1 5.0492 5.0997 3.6299 51 1 4.6666 0.1536 1.5617 52 1 3.5282 1.4124 2.2101 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_4557126.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:36:42 Heat of formation + Delta-G solvation = -94.815724 kcal Electronic energy + Delta-G solvation = -36041.796618 eV Core-core repulsion = 31132.777771 eV Total energy + Delta-G solvation = -4909.018846 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.165 amu Computer time = 1.76 seconds Orbital eigenvalues (eV) -42.11958 -41.69469 -41.15212 -39.98585 -39.08016 -38.78897 -37.46703 -37.33009 -34.94776 -33.36393 -32.71759 -32.17688 -31.14980 -29.41575 -28.04094 -27.02842 -26.87395 -26.54679 -24.88811 -23.84276 -23.33985 -22.40331 -21.85593 -21.59228 -20.73157 -19.05611 -18.95623 -18.85884 -18.40867 -18.05563 -17.58597 -17.55426 -17.47619 -17.22748 -16.91197 -16.46028 -16.37157 -16.05053 -15.91823 -15.82813 -15.49415 -15.35848 -14.73906 -14.68520 -14.60196 -14.49675 -14.30274 -14.20589 -14.13420 -13.68890 -13.63434 -13.55900 -13.44063 -13.24086 -13.03786 -12.80104 -12.58403 -12.45312 -12.36802 -12.25327 -12.21590 -12.19666 -11.88337 -11.86010 -11.84232 -11.46396 -10.94967 -10.39498 -10.32512 -10.03713 -10.00951 -9.85569 -9.41891 -4.94369 -0.29594 0.04652 0.20564 0.24097 1.02459 1.27619 1.61272 1.65367 1.71313 1.90853 1.99095 2.07765 2.48344 2.69999 3.20172 3.27461 3.35972 3.49055 3.54138 3.62090 3.69105 3.72170 3.77372 3.81304 3.85362 3.99137 4.02262 4.09303 4.13812 4.21049 4.23212 4.25956 4.26597 4.35148 4.38706 4.40717 4.46245 4.53462 4.58051 4.59356 4.66106 4.71758 4.79156 4.82181 4.88579 4.88818 5.02062 5.07397 5.14559 5.21073 5.26187 5.29872 5.31332 5.40038 5.42754 5.55690 5.79926 6.21779 6.35807 6.61351 6.90232 7.01483 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.365 6.365 3 C 0.471 3.529 4 O -0.536 6.536 5 C -0.105 4.105 6 H 0.151 0.849 7 C -0.119 4.119 8 C 0.126 3.874 9 H 0.120 0.880 10 N -0.702 5.702 11 C 0.559 3.441 12 O -0.566 6.566 13 C -0.148 4.148 14 C -0.052 4.052 15 C 0.115 3.885 16 O -0.322 6.322 17 C 0.123 3.877 18 C -0.135 4.135 19 C -0.051 4.051 20 C -0.083 4.083 21 O -0.564 6.564 22 Si 0.785 3.215 23 C -0.179 4.179 24 C -0.075 4.075 25 C -0.209 4.209 26 C -0.122 4.122 27 C -0.088 4.088 28 C -0.124 4.124 29 C -0.078 4.078 30 C -0.130 4.130 31 H 0.062 0.938 32 H 0.127 0.873 33 H 0.061 0.939 34 H 0.099 0.901 35 H 0.100 0.900 36 H 0.414 0.586 37 H 0.078 0.922 38 H 0.080 0.920 39 H 0.139 0.861 40 H 0.096 0.904 41 H 0.404 0.596 42 H -0.296 1.296 43 H -0.288 1.288 44 H 0.123 0.877 45 H 0.149 0.851 46 H 0.140 0.860 47 H 0.134 0.866 48 H 0.153 0.847 49 H 0.161 0.839 50 H 0.158 0.842 51 H 0.092 0.908 52 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.599 2.202 1.003 2.493 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.281 6.281 3 C 0.316 3.684 4 O -0.425 6.425 5 C -0.125 4.125 6 H 0.169 0.831 7 C -0.157 4.157 8 C 0.021 3.979 9 H 0.138 0.862 10 N -0.353 5.353 11 C 0.348 3.652 12 O -0.447 6.447 13 C -0.151 4.151 14 C -0.053 4.053 15 C 0.041 3.959 16 O -0.237 6.237 17 C 0.078 3.922 18 C -0.154 4.154 19 C -0.052 4.052 20 C -0.192 4.192 21 O -0.374 6.374 22 Si 0.691 3.309 23 C -0.197 4.197 24 C -0.093 4.093 25 C -0.227 4.227 26 C -0.140 4.140 27 C -0.106 4.106 28 C -0.141 4.141 29 C -0.096 4.096 30 C -0.168 4.168 31 H 0.081 0.919 32 H 0.145 0.855 33 H 0.080 0.920 34 H 0.118 0.882 35 H 0.119 0.881 36 H 0.252 0.748 37 H 0.096 0.904 38 H 0.098 0.902 39 H 0.157 0.843 40 H 0.114 0.886 41 H 0.256 0.744 42 H -0.224 1.224 43 H -0.215 1.215 44 H 0.140 0.860 45 H 0.167 0.833 46 H 0.158 0.842 47 H 0.152 0.848 48 H 0.170 0.830 49 H 0.178 0.822 50 H 0.175 0.825 51 H 0.111 0.889 52 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -0.708 1.387 0.078 1.559 hybrid contribution -1.340 0.300 -0.326 1.411 sum -2.048 1.687 -0.247 2.664 Atomic orbital electron populations 1.23530 0.75001 1.05593 1.02501 1.86526 1.24806 1.33256 1.83468 1.23971 0.92481 0.81011 0.70983 1.90666 1.67852 1.37297 1.46704 1.22451 0.85977 1.01690 1.02355 0.83115 1.23328 0.96442 0.94654 1.01228 1.22461 0.97809 0.89621 0.87994 0.86245 1.45766 1.16797 1.36161 1.36609 1.18457 0.81953 0.83220 0.81593 1.90737 1.47605 1.39526 1.66801 1.19660 0.95720 1.00105 0.99659 1.19694 0.93158 0.96152 0.96295 1.21560 0.82325 0.98183 0.93802 1.85939 1.24208 1.53884 1.59633 1.19142 0.88173 0.90077 0.94791 1.20370 0.91216 1.02505 1.01312 1.19518 0.95433 0.94567 0.95648 1.24934 0.99363 1.08869 0.86083 1.86451 1.40782 1.92986 1.17148 0.94425 0.82092 0.74651 0.79761 1.21006 0.99254 0.99965 0.99464 1.21149 0.91733 0.98033 0.98401 1.21534 1.01690 0.98309 1.01206 1.21133 1.00955 0.95079 0.96864 1.21771 0.93014 0.96968 0.98869 1.21573 0.97663 0.99363 0.95531 1.21577 0.98536 0.92819 0.96710 1.23452 0.97652 1.01204 0.94537 0.91924 0.85487 0.91987 0.88249 0.88127 0.74765 0.90438 0.90227 0.84271 0.88584 0.74408 1.22398 1.21521 0.85983 0.83296 0.84185 0.84806 0.82972 0.82179 0.82498 0.88934 0.89233 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.15 16 2 O -0.36 -0.82 10.57 -51.43 -0.54 -1.37 16 3 C 0.47 1.22 7.49 71.24 0.53 1.75 16 4 O -0.54 -4.35 15.65 21.95 0.34 -4.01 16 5 C -0.11 0.38 4.26 -10.96 -0.05 0.34 16 6 H 0.15 -1.12 8.14 -2.39 -0.02 -1.14 16 7 C -0.12 0.56 7.15 31.12 0.22 0.78 16 8 C 0.13 -0.41 4.21 45.51 0.19 -0.21 16 9 H 0.12 -0.17 7.50 -2.39 -0.02 -0.19 16 10 N -0.70 1.74 5.31 -442.90 -2.35 -0.61 16 11 C 0.56 2.07 7.75 86.79 0.67 2.74 16 12 O -0.57 -5.40 13.03 -3.87 -0.05 -5.45 16 13 C -0.15 -0.40 5.87 -20.09 -0.12 -0.52 16 14 C -0.05 -0.31 5.91 -19.61 -0.12 -0.43 16 15 C 0.12 0.98 3.38 71.24 0.24 1.22 16 16 O -0.32 -3.30 8.62 -92.47 -0.80 -4.10 16 17 C 0.12 1.35 6.69 22.51 0.15 1.50 16 18 C -0.14 -1.35 9.62 22.37 0.22 -1.13 16 19 C -0.05 -0.45 5.38 -19.88 -0.11 -0.56 16 20 C -0.08 -0.17 2.79 71.23 0.20 0.03 16 21 O -0.56 -1.20 12.81 -148.98 -1.91 -3.10 16 22 Si 0.79 -0.31 29.85 68.60 2.05 1.74 16 23 C -0.18 -1.61 8.67 22.28 0.19 -1.42 16 24 C -0.08 -0.60 10.04 22.25 0.22 -0.38 16 25 C -0.21 -1.97 9.04 22.36 0.20 -1.77 16 26 C -0.12 -0.44 9.37 22.23 0.21 -0.23 16 27 C -0.09 0.13 10.04 22.33 0.22 0.35 16 28 C -0.12 0.49 10.03 22.23 0.22 0.72 16 29 C -0.08 0.24 9.54 22.53 0.21 0.46 16 30 C -0.13 0.46 7.44 31.18 0.23 0.69 16 31 H 0.06 -0.07 8.13 -2.39 -0.02 -0.09 16 32 H 0.13 -0.87 8.14 -2.39 -0.02 -0.89 16 33 H 0.06 -0.08 8.13 -2.39 -0.02 -0.10 16 34 H 0.10 -0.34 7.41 -2.39 -0.02 -0.36 16 35 H 0.10 -0.65 8.14 -2.39 -0.02 -0.67 16 36 H 0.41 -3.03 6.75 -92.71 -0.63 -3.65 16 37 H 0.08 0.79 6.85 -2.39 -0.02 0.77 16 38 H 0.08 0.77 6.87 -2.39 -0.02 0.75 16 39 H 0.14 1.10 8.06 -2.91 -0.02 1.08 16 40 H 0.10 -0.21 7.96 -2.38 -0.02 -0.23 16 41 H 0.40 -3.69 8.74 -74.06 -0.65 -4.34 16 42 H -0.30 -2.08 7.05 99.48 0.70 -1.38 16 43 H -0.29 -1.42 7.11 99.48 0.71 -0.72 16 44 H 0.12 0.90 4.86 -2.91 -0.01 0.88 16 45 H 0.15 0.44 8.06 -2.91 -0.02 0.41 16 46 H 0.14 1.14 6.30 -2.91 -0.02 1.12 16 47 H 0.13 0.56 7.00 -2.91 -0.02 0.54 16 48 H 0.15 -0.92 8.06 -2.91 -0.02 -0.95 16 49 H 0.16 -1.53 8.06 -2.91 -0.02 -1.56 16 50 H 0.16 -1.51 6.41 -2.91 -0.02 -1.53 16 51 H 0.09 -0.32 8.14 -2.39 -0.02 -0.34 16 52 H 0.09 -0.25 8.10 -2.38 -0.02 -0.27 16 Total: 0.00 -26.10 431.05 1.44 -24.66 By element: Atomic # 1 Polarization: -12.59 SS G_CDS: -0.25 Total: -12.84 kcal Atomic # 6 Polarization: 0.12 SS G_CDS: 4.96 Total: 5.08 kcal Atomic # 7 Polarization: 1.74 SS G_CDS: -2.35 Total: -0.61 kcal Atomic # 8 Polarization: -15.07 SS G_CDS: -2.96 Total: -18.02 kcal Atomic # 14 Polarization: -0.31 SS G_CDS: 2.05 Total: 1.74 kcal Total: -26.10 1.44 -24.66 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_4557126.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -70.154 kcal (2) G-P(sol) polarization free energy of solvation -26.104 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.258 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.442 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.662 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.816 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.76 seconds