Wall clock time and date at job start Sat Mar 6 2021 15:36:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34228 * 117.00213 * 2 1 4 4 O 1.20821 * 119.99868 * 359.97438 * 3 2 1 5 5 C 1.50701 * 120.00043 * 180.02562 * 3 2 1 6 6 H 1.08999 * 112.84672 * 311.19505 * 5 3 2 7 7 C 1.53781 * 113.61546 * 82.49993 * 5 3 2 8 8 C 1.53783 * 87.07778 * 139.98267 * 7 5 3 9 9 H 1.08994 * 113.69119 * 89.13303 * 8 7 5 10 10 N 1.46503 * 113.61297 * 220.01864 * 8 7 5 11 11 C 1.34776 * 120.00116 * 252.50104 * 10 8 7 12 12 O 1.21283 * 119.99831 * 359.97438 * 11 10 8 13 13 C 1.50700 * 120.00064 * 179.97438 * 11 10 8 14 14 O 1.42899 * 109.47226 * 179.97438 * 13 11 10 15 15 C 1.35981 * 117.00037 * 180.02562 * 14 13 11 16 16 C 1.38675 * 119.99927 * 179.97438 * 15 14 13 17 17 C 1.50701 * 120.00080 * 0.03953 * 16 15 14 18 18 O 1.42902 * 109.47007 * 75.00211 * 17 16 15 19 19 Si 1.86301 * 109.47090 * 195.00402 * 17 16 15 20 20 C 1.38157 * 119.99825 * 180.02562 * 16 15 14 21 21 C 1.38673 * 120.00322 * 359.97438 * 20 16 15 22 22 O 1.35981 * 120.00220 * 180.02562 * 21 20 16 23 23 C 1.42901 * 116.99673 * 179.97438 * 22 21 20 24 24 C 1.38728 * 119.99649 * 359.74525 * 21 20 16 25 25 C 1.38108 * 119.99946 * 0.51318 * 24 21 20 26 26 C 1.53782 * 113.61211 * 180.02562 * 5 3 2 27 27 H 1.09007 * 109.46441 * 299.99845 * 1 2 3 28 28 H 1.08991 * 109.47065 * 59.99542 * 1 2 3 29 29 H 1.08996 * 109.47073 * 179.97438 * 1 2 3 30 30 H 1.08997 * 113.60960 * 25.43475 * 7 5 3 31 31 H 1.09000 * 113.61583 * 254.53032 * 7 5 3 32 32 H 0.96998 * 119.99747 * 72.49603 * 10 8 7 33 33 H 1.09008 * 109.46883 * 59.99628 * 13 11 10 34 34 H 1.09001 * 109.47338 * 300.00128 * 13 11 10 35 35 H 1.08999 * 109.47049 * 315.00044 * 17 16 15 36 36 H 0.96701 * 113.99702 * 300.00233 * 18 17 16 37 37 H 1.48507 * 109.99769 * 298.67944 * 19 17 16 38 38 H 1.48493 * 110.00255 * 60.00015 * 19 17 16 39 39 H 1.08001 * 119.99588 * 180.02562 * 20 16 15 40 40 H 1.09004 * 109.46965 * 299.99670 * 23 22 21 41 41 H 1.08994 * 109.47111 * 60.00160 * 23 22 21 42 42 H 1.09002 * 109.46512 * 180.02562 * 23 22 21 43 43 H 1.07998 * 119.99677 * 180.27683 * 24 21 20 44 44 H 1.08002 * 120.00212 * 179.77140 * 25 24 21 45 45 H 1.08997 * 113.61427 * 105.46972 * 26 5 3 46 46 H 1.08996 * 113.61478 * 334.55964 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2748 -0.0006 6 1 4.0240 0.6361 0.7549 7 6 4.1907 1.1236 -1.3978 8 6 5.1808 2.2268 -0.9885 9 1 6.0813 1.8494 -0.5042 10 7 5.4695 3.1833 -2.0601 11 6 6.6672 3.1620 -2.6777 12 8 7.5062 2.3514 -2.3461 13 6 6.9640 4.1455 -3.7803 14 8 8.2873 3.9246 -4.2722 15 6 8.7156 4.7344 -5.2772 16 6 9.9897 4.5749 -5.8010 17 6 10.8993 3.5035 -5.2571 18 8 10.4725 2.2272 -5.7377 19 14 12.6455 3.8268 -5.8200 20 6 10.4249 5.3980 -6.8216 21 6 9.5877 6.3833 -7.3227 22 8 10.0159 7.1931 -8.3277 23 6 9.1007 8.1860 -8.7954 24 6 8.3110 6.5391 -6.8026 25 6 7.8778 5.7198 -5.7787 26 6 4.1078 2.7142 0.0001 27 1 -0.3632 0.5139 0.8901 28 1 -0.3633 0.5139 -0.8899 29 1 -0.3633 -1.0276 -0.0005 30 1 3.5227 1.4152 -2.2083 31 1 4.6610 0.1543 -1.5635 32 1 4.7986 3.8318 -2.3250 33 1 6.8858 5.1611 -3.3921 34 1 6.2475 4.0102 -4.5905 35 1 10.8611 3.5130 -4.1678 36 1 9.5700 1.9923 -5.4818 37 1 12.7172 3.7850 -7.3027 38 1 13.1012 5.1512 -5.3267 39 1 11.4171 5.2734 -7.2298 40 1 8.2006 7.7011 -9.1733 41 1 8.8370 8.8526 -7.9743 42 1 9.5665 8.7612 -9.5956 43 1 7.6573 7.3036 -7.1959 44 1 6.8853 5.8434 -5.3713 45 1 4.5113 3.0284 0.9627 46 1 3.4173 3.4406 -0.4281 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_4974302.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:36:50 Heat of formation + Delta-G solvation = -160.877737 kcal Electronic energy + Delta-G solvation = -30576.292329 eV Core-core repulsion = 26014.168807 eV Total energy + Delta-G solvation = -4562.123521 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.149 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -42.09469 -41.80811 -40.94487 -40.07000 -39.15094 -37.98528 -37.37453 -36.84773 -34.76789 -32.83196 -31.21141 -29.96570 -29.14998 -28.14903 -27.03435 -26.75974 -26.50045 -23.96693 -22.62344 -22.40992 -21.80078 -20.80341 -19.60435 -19.06182 -18.83433 -18.44372 -17.97922 -17.93504 -17.59930 -17.44633 -17.43620 -16.74817 -16.57904 -16.36387 -16.04630 -15.72851 -15.52705 -15.42830 -15.15746 -14.68026 -14.51239 -14.30958 -14.14973 -13.91236 -13.80495 -13.73183 -13.55375 -13.40873 -13.12212 -13.09752 -12.72384 -12.66907 -12.45739 -12.29471 -11.99241 -11.97557 -11.85191 -11.57049 -11.44736 -11.13240 -10.97534 -10.87229 -10.30538 -10.13526 -8.86754 -4.68854 0.01993 0.30230 1.06803 1.27321 1.35786 1.51379 1.67050 1.79604 2.09593 2.21733 2.46513 2.51431 3.05817 3.12899 3.34126 3.45206 3.50448 3.58302 3.59671 3.71230 3.79665 3.89186 3.91992 4.03290 4.08248 4.10437 4.10444 4.13354 4.17812 4.28007 4.30478 4.36786 4.43350 4.44406 4.50116 4.53645 4.59894 4.62252 4.70539 4.87744 4.99903 5.06438 5.13264 5.23834 5.32152 5.35278 6.02009 6.21354 6.33598 6.65275 6.75097 6.96095 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.109 4.109 6 H 0.133 0.867 7 C -0.134 4.134 8 C 0.128 3.872 9 H 0.127 0.873 10 N -0.717 5.717 11 C 0.519 3.481 12 O -0.508 6.508 13 C 0.040 3.960 14 O -0.288 6.288 15 C 0.102 3.898 16 C -0.096 4.096 17 C -0.075 4.075 18 O -0.533 6.533 19 Si 0.747 3.253 20 C -0.115 4.115 21 C 0.104 3.896 22 O -0.316 6.316 23 C 0.026 3.974 24 C -0.164 4.164 25 C -0.164 4.164 26 C -0.127 4.127 27 H 0.064 0.936 28 H 0.063 0.937 29 H 0.104 0.896 30 H 0.092 0.908 31 H 0.092 0.908 32 H 0.404 0.596 33 H 0.095 0.905 34 H 0.095 0.905 35 H 0.080 0.920 36 H 0.368 0.632 37 H -0.251 1.251 38 H -0.249 1.249 39 H 0.139 0.861 40 H 0.056 0.944 41 H 0.056 0.944 42 H 0.103 0.897 43 H 0.136 0.864 44 H 0.135 0.865 45 H 0.090 0.910 46 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.316 1.567 1.027 4.705 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.272 6.272 3 C 0.315 3.685 4 O -0.393 6.393 5 C -0.129 4.129 6 H 0.151 0.849 7 C -0.173 4.173 8 C 0.023 3.977 9 H 0.145 0.855 10 N -0.371 5.371 11 C 0.303 3.697 12 O -0.382 6.382 13 C -0.039 4.039 14 O -0.201 6.201 15 C 0.057 3.943 16 C -0.097 4.097 17 C -0.184 4.184 18 O -0.338 6.338 19 Si 0.645 3.355 20 C -0.133 4.133 21 C 0.059 3.941 22 O -0.230 6.230 23 C -0.069 4.069 24 C -0.183 4.183 25 C -0.183 4.183 26 C -0.165 4.165 27 H 0.083 0.917 28 H 0.082 0.918 29 H 0.122 0.878 30 H 0.110 0.890 31 H 0.110 0.890 32 H 0.239 0.761 33 H 0.112 0.888 34 H 0.113 0.887 35 H 0.098 0.902 36 H 0.216 0.784 37 H -0.176 1.176 38 H -0.173 1.173 39 H 0.156 0.844 40 H 0.075 0.925 41 H 0.075 0.925 42 H 0.122 0.878 43 H 0.154 0.846 44 H 0.153 0.847 45 H 0.109 0.891 46 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -2.512 1.630 0.544 3.043 hybrid contribution -3.075 1.242 0.004 3.316 sum -5.586 2.872 0.548 6.305 Atomic orbital electron populations 1.23335 0.75839 1.04102 1.02705 1.86523 1.23790 1.33219 1.83708 1.23455 0.91554 0.81451 0.72050 1.90682 1.66994 1.36447 1.45167 1.22306 0.87786 1.00963 1.01822 0.84918 1.23461 0.97901 1.01275 0.94650 1.22490 0.98013 0.89401 0.87809 0.85517 1.45763 1.15977 1.37488 1.37833 1.20039 0.82218 0.84657 0.82744 1.90793 1.45794 1.37927 1.63636 1.22470 0.85008 0.99604 0.96842 1.86112 1.30102 1.54753 1.49106 1.18612 0.93457 0.92112 0.90123 1.19494 0.93322 0.99580 0.97334 1.25210 1.08394 0.82876 1.01917 1.86698 1.35708 1.32855 1.78581 0.93117 0.78429 0.83333 0.80575 1.20132 1.00167 0.95522 0.97524 1.18804 0.92860 0.92318 0.90146 1.86115 1.42515 1.45180 1.49150 1.23113 0.93876 0.90021 0.99872 1.21087 0.95597 1.02274 0.99348 1.21044 1.00276 0.97299 0.99637 1.23398 0.97047 0.95025 1.00992 0.91681 0.91777 0.87766 0.88970 0.88963 0.76054 0.88761 0.88746 0.90200 0.78411 1.17606 1.17338 0.84368 0.92496 0.92503 0.87837 0.84588 0.84722 0.89117 0.87827 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.26 10.57 -39.25 -0.41 -0.67 16 3 C 0.47 0.35 7.48 36.01 0.27 0.62 16 4 O -0.51 -1.71 15.65 -18.75 -0.29 -2.00 16 5 C -0.11 0.24 4.26 -90.96 -0.39 -0.15 16 6 H 0.13 -0.50 8.14 -51.93 -0.42 -0.92 16 7 C -0.13 0.33 7.43 -25.92 -0.19 0.14 16 8 C 0.13 -0.31 4.24 -67.09 -0.28 -0.59 16 9 H 0.13 -0.17 7.46 -51.93 -0.39 -0.55 16 10 N -0.72 2.01 5.35 -52.99 -0.28 1.72 16 11 C 0.52 -0.01 7.91 -10.99 -0.09 -0.09 16 12 O -0.51 -2.29 16.10 -14.35 -0.23 -2.52 16 13 C 0.04 -0.07 5.22 36.01 0.19 0.11 16 14 O -0.29 -0.52 8.56 -39.59 -0.34 -0.85 16 15 C 0.10 0.22 6.62 -39.24 -0.26 -0.04 16 16 C -0.10 -0.33 5.27 -104.49 -0.55 -0.88 16 17 C -0.08 -0.22 2.33 36.01 0.08 -0.14 16 18 O -0.53 -1.99 12.65 -35.23 -0.45 -2.44 16 19 Si 0.75 1.20 30.40 -169.99 -5.17 -3.97 16 20 C -0.12 -0.45 8.59 -39.45 -0.34 -0.78 16 21 C 0.10 0.31 6.69 -39.24 -0.26 0.05 16 22 O -0.32 -0.90 10.50 -19.68 -0.21 -1.10 16 23 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 24 C -0.16 -0.13 9.03 -39.45 -0.36 -0.49 16 25 C -0.16 -0.04 9.03 -39.45 -0.36 -0.40 16 26 C -0.13 0.36 7.16 -25.90 -0.19 0.17 16 27 H 0.06 -0.07 8.13 -51.93 -0.42 -0.49 16 28 H 0.06 -0.08 8.13 -51.93 -0.42 -0.50 16 29 H 0.10 -0.35 8.14 -51.93 -0.42 -0.78 16 30 H 0.09 -0.22 8.09 -51.93 -0.42 -0.64 16 31 H 0.09 -0.22 8.14 -51.93 -0.42 -0.65 16 32 H 0.40 -2.21 8.73 -40.82 -0.36 -2.57 16 33 H 0.09 -0.38 7.66 -51.92 -0.40 -0.78 16 34 H 0.09 -0.40 7.66 -51.93 -0.40 -0.79 16 35 H 0.08 0.21 7.82 -51.93 -0.41 -0.20 16 36 H 0.37 0.85 8.60 45.56 0.39 1.24 16 37 H -0.25 -0.97 6.81 56.52 0.38 -0.59 16 38 H -0.25 -0.71 7.11 56.52 0.40 -0.31 16 39 H 0.14 0.54 4.93 -52.49 -0.26 0.28 16 40 H 0.06 -0.13 7.65 -51.93 -0.40 -0.53 16 41 H 0.06 -0.13 7.67 -51.93 -0.40 -0.53 16 42 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 43 H 0.14 -0.23 6.29 -52.49 -0.33 -0.56 16 44 H 0.14 -0.40 6.29 -52.49 -0.33 -0.73 16 45 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 46 H 0.10 -0.24 7.41 -51.93 -0.38 -0.62 16 LS Contribution 388.58 15.07 5.86 5.86 Total: 0.00 -10.66 388.58 -8.44 -19.09 By element: Atomic # 1 Polarization: -6.40 SS G_CDS: -6.25 Total: -12.65 kcal Atomic # 6 Polarization: 0.19 SS G_CDS: -0.66 Total: -0.47 kcal Atomic # 7 Polarization: 2.01 SS G_CDS: -0.28 Total: 1.72 kcal Atomic # 8 Polarization: -7.66 SS G_CDS: -1.93 Total: -9.59 kcal Atomic # 14 Polarization: 1.20 SS G_CDS: -5.17 Total: -3.97 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -10.66 -8.44 -19.09 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_4974302.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -141.783 kcal (2) G-P(sol) polarization free energy of solvation -10.659 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -152.442 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.436 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.094 kcal (6) G-S(sol) free energy of system = (1) + (5) -160.878 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds