Wall clock time and date at job start Sat Mar 6 2021 15:36:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34228 * 117.00213 * 2 1 4 4 O 1.20821 * 119.99868 * 359.97438 * 3 2 1 5 5 C 1.50701 * 120.00043 * 180.02562 * 3 2 1 6 6 H 1.08999 * 112.84672 * 311.19505 * 5 3 2 7 7 C 1.53781 * 113.61546 * 82.49993 * 5 3 2 8 8 C 1.53783 * 87.07778 * 139.98267 * 7 5 3 9 9 H 1.08994 * 113.69119 * 89.13303 * 8 7 5 10 10 N 1.46503 * 113.61297 * 220.01864 * 8 7 5 11 11 C 1.34776 * 120.00116 * 252.50104 * 10 8 7 12 12 O 1.21283 * 119.99831 * 359.97438 * 11 10 8 13 13 C 1.50700 * 120.00064 * 179.97438 * 11 10 8 14 14 O 1.42899 * 109.47226 * 179.97438 * 13 11 10 15 15 C 1.35981 * 117.00037 * 180.02562 * 14 13 11 16 16 C 1.38675 * 119.99927 * 179.97438 * 15 14 13 17 17 C 1.50701 * 120.00080 * 0.03953 * 16 15 14 18 18 O 1.42902 * 109.47007 * 75.00211 * 17 16 15 19 19 Si 1.86301 * 109.47090 * 195.00402 * 17 16 15 20 20 C 1.38157 * 119.99825 * 180.02562 * 16 15 14 21 21 C 1.38673 * 120.00322 * 359.97438 * 20 16 15 22 22 O 1.35981 * 120.00220 * 180.02562 * 21 20 16 23 23 C 1.42901 * 116.99673 * 179.97438 * 22 21 20 24 24 C 1.38728 * 119.99649 * 359.74525 * 21 20 16 25 25 C 1.38108 * 119.99946 * 0.51318 * 24 21 20 26 26 C 1.53782 * 113.61211 * 180.02562 * 5 3 2 27 27 H 1.09007 * 109.46441 * 299.99845 * 1 2 3 28 28 H 1.08991 * 109.47065 * 59.99542 * 1 2 3 29 29 H 1.08996 * 109.47073 * 179.97438 * 1 2 3 30 30 H 1.08997 * 113.60960 * 25.43475 * 7 5 3 31 31 H 1.09000 * 113.61583 * 254.53032 * 7 5 3 32 32 H 0.96998 * 119.99747 * 72.49603 * 10 8 7 33 33 H 1.09008 * 109.46883 * 59.99628 * 13 11 10 34 34 H 1.09001 * 109.47338 * 300.00128 * 13 11 10 35 35 H 1.08999 * 109.47049 * 315.00044 * 17 16 15 36 36 H 0.96701 * 113.99702 * 300.00233 * 18 17 16 37 37 H 1.48507 * 109.99769 * 298.67944 * 19 17 16 38 38 H 1.48493 * 110.00255 * 60.00015 * 19 17 16 39 39 H 1.08001 * 119.99588 * 180.02562 * 20 16 15 40 40 H 1.09004 * 109.46965 * 299.99670 * 23 22 21 41 41 H 1.08994 * 109.47111 * 60.00160 * 23 22 21 42 42 H 1.09002 * 109.46512 * 180.02562 * 23 22 21 43 43 H 1.07998 * 119.99677 * 180.27683 * 24 21 20 44 44 H 1.08002 * 120.00212 * 179.77140 * 25 24 21 45 45 H 1.08997 * 113.61427 * 105.46972 * 26 5 3 46 46 H 1.08996 * 113.61478 * 334.55964 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2748 -0.0006 6 1 4.0240 0.6361 0.7549 7 6 4.1907 1.1236 -1.3978 8 6 5.1808 2.2268 -0.9885 9 1 6.0813 1.8494 -0.5042 10 7 5.4695 3.1833 -2.0601 11 6 6.6672 3.1620 -2.6777 12 8 7.5062 2.3514 -2.3461 13 6 6.9640 4.1455 -3.7803 14 8 8.2873 3.9246 -4.2722 15 6 8.7156 4.7344 -5.2772 16 6 9.9897 4.5749 -5.8010 17 6 10.8993 3.5035 -5.2571 18 8 10.4725 2.2272 -5.7377 19 14 12.6455 3.8268 -5.8200 20 6 10.4249 5.3980 -6.8216 21 6 9.5877 6.3833 -7.3227 22 8 10.0159 7.1931 -8.3277 23 6 9.1007 8.1860 -8.7954 24 6 8.3110 6.5391 -6.8026 25 6 7.8778 5.7198 -5.7787 26 6 4.1078 2.7142 0.0001 27 1 -0.3632 0.5139 0.8901 28 1 -0.3633 0.5139 -0.8899 29 1 -0.3633 -1.0276 -0.0005 30 1 3.5227 1.4152 -2.2083 31 1 4.6610 0.1543 -1.5635 32 1 4.7986 3.8318 -2.3250 33 1 6.8858 5.1611 -3.3921 34 1 6.2475 4.0102 -4.5905 35 1 10.8611 3.5130 -4.1678 36 1 9.5700 1.9923 -5.4818 37 1 12.7172 3.7850 -7.3027 38 1 13.1012 5.1512 -5.3267 39 1 11.4171 5.2734 -7.2298 40 1 8.2006 7.7011 -9.1733 41 1 8.8370 8.8526 -7.9743 42 1 9.5665 8.7612 -9.5956 43 1 7.6573 7.3036 -7.1959 44 1 6.8853 5.8434 -5.3713 45 1 4.5113 3.0284 0.9627 46 1 3.4173 3.4406 -0.4281 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_4974302.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:36:49 Heat of formation + Delta-G solvation = -162.609068 kcal Electronic energy + Delta-G solvation = -30576.367405 eV Core-core repulsion = 26014.168807 eV Total energy + Delta-G solvation = -4562.198598 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.149 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -42.06440 -41.84864 -40.95102 -40.08039 -39.12498 -38.10959 -37.44059 -36.99061 -34.70923 -32.92563 -31.21081 -29.91473 -29.06510 -28.09327 -26.83707 -26.66761 -26.62031 -24.01449 -22.59401 -22.48650 -21.72188 -20.69922 -19.64223 -19.04572 -18.85625 -18.44774 -18.07519 -17.97894 -17.54879 -17.49164 -17.42155 -16.75402 -16.53506 -16.22508 -16.11695 -15.75413 -15.56927 -15.45643 -15.28406 -14.74493 -14.48651 -14.28339 -14.15344 -13.98640 -13.72207 -13.60983 -13.54057 -13.44752 -13.11591 -13.02355 -12.59947 -12.53351 -12.36980 -12.33279 -12.22557 -11.86536 -11.82351 -11.54869 -11.44307 -11.29023 -11.11696 -10.97796 -10.24867 -10.19008 -8.94441 -4.86432 -0.07864 0.20442 1.04443 1.32169 1.37087 1.41936 1.59572 1.74991 1.90312 2.21878 2.41652 2.56037 3.22698 3.30489 3.41626 3.48273 3.61153 3.64381 3.74801 3.83453 3.91452 3.98048 4.02339 4.03261 4.07130 4.11997 4.24818 4.27199 4.27564 4.32265 4.33246 4.48991 4.55963 4.57089 4.62812 4.66823 4.67858 4.82330 4.87218 4.92256 4.99869 5.04617 5.06727 5.28094 5.32125 5.43315 6.04965 6.29375 6.41727 6.55253 6.63403 7.08818 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.365 6.365 3 C 0.471 3.529 4 O -0.536 6.536 5 C -0.108 4.108 6 H 0.150 0.850 7 C -0.129 4.129 8 C 0.127 3.873 9 H 0.116 0.884 10 N -0.702 5.702 11 C 0.518 3.482 12 O -0.562 6.562 13 C 0.034 3.966 14 O -0.308 6.308 15 C 0.098 3.902 16 C -0.118 4.118 17 C -0.084 4.084 18 O -0.544 6.544 19 Si 0.811 3.189 20 C -0.142 4.142 21 C 0.088 3.912 22 O -0.342 6.342 23 C 0.017 3.983 24 C -0.159 4.159 25 C -0.155 4.155 26 C -0.118 4.118 27 H 0.061 0.939 28 H 0.062 0.938 29 H 0.127 0.873 30 H 0.093 0.907 31 H 0.091 0.909 32 H 0.420 0.580 33 H 0.124 0.876 34 H 0.125 0.875 35 H 0.080 0.920 36 H 0.372 0.628 37 H -0.288 1.288 38 H -0.267 1.267 39 H 0.124 0.876 40 H 0.069 0.931 41 H 0.070 0.930 42 H 0.114 0.886 43 H 0.165 0.835 44 H 0.174 0.826 45 H 0.098 0.902 46 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.169 2.435 1.285 6.755 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.281 6.281 3 C 0.316 3.684 4 O -0.426 6.426 5 C -0.127 4.127 6 H 0.167 0.833 7 C -0.168 4.168 8 C 0.022 3.978 9 H 0.134 0.866 10 N -0.355 5.355 11 C 0.304 3.696 12 O -0.439 6.439 13 C -0.044 4.044 14 O -0.222 6.222 15 C 0.053 3.947 16 C -0.119 4.119 17 C -0.192 4.192 18 O -0.350 6.350 19 Si 0.713 3.287 20 C -0.161 4.161 21 C 0.043 3.957 22 O -0.256 6.256 23 C -0.077 4.077 24 C -0.178 4.178 25 C -0.173 4.173 26 C -0.156 4.156 27 H 0.080 0.920 28 H 0.080 0.920 29 H 0.145 0.855 30 H 0.111 0.889 31 H 0.110 0.890 32 H 0.258 0.742 33 H 0.142 0.858 34 H 0.142 0.858 35 H 0.098 0.902 36 H 0.221 0.779 37 H -0.215 1.215 38 H -0.193 1.193 39 H 0.141 0.859 40 H 0.088 0.912 41 H 0.088 0.912 42 H 0.133 0.867 43 H 0.182 0.818 44 H 0.191 0.809 45 H 0.117 0.883 46 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -4.418 2.504 0.818 5.144 hybrid contribution -2.622 0.999 -0.092 2.807 sum -7.040 3.502 0.726 7.896 Atomic orbital electron populations 1.23525 0.75031 1.05576 1.02483 1.86527 1.24777 1.33311 1.83462 1.23986 0.92502 0.80980 0.70948 1.90663 1.67874 1.37298 1.46752 1.22443 0.85932 1.01843 1.02486 0.83277 1.23429 0.97640 1.01226 0.94509 1.22413 0.97637 0.89667 0.88040 0.86626 1.45660 1.15556 1.37302 1.37011 1.20429 0.82114 0.84232 0.82833 1.90777 1.47537 1.40216 1.65418 1.22769 0.84088 1.00380 0.97161 1.86088 1.32044 1.55009 1.49019 1.18678 0.93236 0.92572 0.90208 1.19562 0.94482 0.99935 0.97939 1.25362 1.09179 0.82675 1.01967 1.86656 1.36150 1.33410 1.78820 0.92508 0.77073 0.81620 0.77493 1.20162 1.00209 0.97014 0.98665 1.18994 0.93775 0.92381 0.90585 1.86079 1.44263 1.45990 1.49290 1.23386 0.93977 0.89633 1.00708 1.21431 0.94846 1.02600 0.98909 1.21465 1.01420 0.95745 0.98704 1.23345 0.96463 0.94584 1.01192 0.91984 0.91950 0.85523 0.88883 0.89020 0.74220 0.85849 0.85757 0.90192 0.77926 1.21501 1.19325 0.85865 0.91244 0.91157 0.86741 0.81780 0.80880 0.88309 0.88045 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 10.56 113.37 1.20 1.13 16 2 O -0.36 -0.49 10.57 -51.40 -0.54 -1.03 16 3 C 0.47 0.68 7.48 71.24 0.53 1.21 16 4 O -0.54 -3.73 15.65 21.98 0.34 -3.38 16 5 C -0.11 0.52 4.26 -11.01 -0.05 0.48 16 6 H 0.15 -1.23 8.14 -2.39 -0.02 -1.25 16 7 C -0.13 0.70 7.43 31.12 0.23 0.93 16 8 C 0.13 -0.67 4.24 45.53 0.19 -0.47 16 9 H 0.12 -0.26 7.46 -2.39 -0.02 -0.28 16 10 N -0.70 4.71 5.35 -439.96 -2.36 2.35 16 11 C 0.52 -0.34 7.91 87.66 0.69 0.35 16 12 O -0.56 -5.51 16.10 16.00 0.26 -5.26 16 13 C 0.03 -0.19 5.22 71.24 0.37 0.18 16 14 O -0.31 -0.98 8.56 -74.30 -0.64 -1.61 16 15 C 0.10 0.38 6.62 22.49 0.15 0.52 16 16 C -0.12 -0.96 5.27 -19.78 -0.10 -1.06 16 17 C -0.08 -0.64 2.33 71.24 0.17 -0.47 16 18 O -0.54 -5.01 12.65 -148.98 -1.89 -6.89 16 19 Si 0.81 4.35 30.40 68.60 2.09 6.44 16 20 C -0.14 -1.37 8.59 22.35 0.19 -1.18 16 21 C 0.09 0.57 6.69 22.49 0.15 0.72 16 22 O -0.34 -2.18 10.50 -93.34 -0.98 -3.16 16 23 C 0.02 -0.06 9.81 113.37 1.11 1.06 16 24 C -0.16 -0.01 9.03 22.36 0.20 0.19 16 25 C -0.16 0.26 9.03 22.35 0.20 0.46 16 26 C -0.12 0.75 7.16 31.14 0.22 0.98 16 27 H 0.06 -0.12 8.13 -2.38 -0.02 -0.14 16 28 H 0.06 -0.13 8.13 -2.39 -0.02 -0.15 16 29 H 0.13 -0.95 8.14 -2.39 -0.02 -0.97 16 30 H 0.09 -0.50 8.09 -2.39 -0.02 -0.52 16 31 H 0.09 -0.46 8.14 -2.39 -0.02 -0.47 16 32 H 0.42 -5.42 8.73 -92.71 -0.81 -6.22 16 33 H 0.12 -1.41 7.66 -2.38 -0.02 -1.43 16 34 H 0.12 -1.45 7.66 -2.39 -0.02 -1.46 16 35 H 0.08 0.55 7.82 -2.39 -0.02 0.54 16 36 H 0.37 2.36 8.60 -74.06 -0.64 1.72 16 37 H -0.29 -3.18 6.81 99.48 0.68 -2.50 16 38 H -0.27 -2.12 7.11 99.48 0.71 -1.42 16 39 H 0.12 1.38 4.93 -2.91 -0.01 1.37 16 40 H 0.07 -0.41 7.65 -2.39 -0.02 -0.43 16 41 H 0.07 -0.43 7.67 -2.39 -0.02 -0.45 16 42 H 0.11 -0.69 8.14 -2.39 -0.02 -0.71 16 43 H 0.16 -1.03 6.29 -2.91 -0.02 -1.05 16 44 H 0.17 -1.76 6.29 -2.91 -0.02 -1.78 16 45 H 0.10 -0.76 8.14 -2.39 -0.02 -0.78 16 46 H 0.10 -0.56 7.41 -2.39 -0.02 -0.57 16 Total: 0.00 -27.84 388.58 1.35 -26.49 By element: Atomic # 1 Polarization: -18.57 SS G_CDS: -0.40 Total: -18.97 kcal Atomic # 6 Polarization: -0.44 SS G_CDS: 5.46 Total: 5.03 kcal Atomic # 7 Polarization: 4.71 SS G_CDS: -2.36 Total: 2.35 kcal Atomic # 8 Polarization: -17.89 SS G_CDS: -3.44 Total: -21.33 kcal Atomic # 14 Polarization: 4.35 SS G_CDS: 2.09 Total: 6.44 kcal Total: -27.84 1.35 -26.49 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_4974302.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -136.120 kcal (2) G-P(sol) polarization free energy of solvation -27.844 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -163.964 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.355 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.489 kcal (6) G-S(sol) free energy of system = (1) + (5) -162.609 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds