Wall clock time and date at job start Sat Mar 6 2021 15:36:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34225 * 117.00095 * 2 1 4 4 O 1.20824 * 120.00306 * 0.02562 * 3 2 1 5 5 C 1.50705 * 119.99791 * 179.97438 * 3 2 1 6 6 H 1.08995 * 112.85252 * 311.20433 * 5 3 2 7 7 C 1.53959 * 113.66335 * 82.44429 * 5 3 2 8 8 C 1.53780 * 87.02074 * 139.93050 * 7 5 3 9 9 H 1.09002 * 113.61174 * 89.22888 * 8 7 5 10 10 N 1.46500 * 113.61728 * 220.04900 * 8 7 5 11 11 C 1.34769 * 119.99915 * 254.13879 * 10 8 7 12 12 O 1.21282 * 120.00277 * 359.97438 * 11 10 8 13 13 C 1.50704 * 120.00125 * 180.02562 * 11 10 8 14 14 O 1.42899 * 109.47357 * 179.97438 * 13 11 10 15 15 C 1.35896 * 117.00077 * 179.97438 * 14 13 11 16 16 C 1.38750 * 120.03049 * 180.02562 * 15 14 13 17 17 C 1.50705 * 119.97117 * 359.96930 * 16 15 14 18 18 O 1.42898 * 109.47207 * 285.00734 * 17 16 15 19 19 Si 1.86295 * 109.47197 * 165.00408 * 17 16 15 20 20 C 1.38189 * 120.05864 * 179.97438 * 16 15 14 21 21 C 1.38154 * 120.10792 * 359.79026 * 20 16 15 22 22 C 1.38792 * 120.05443 * 0.45638 * 21 20 16 23 23 O 1.35904 * 120.02989 * 179.79393 * 22 21 20 24 24 C 1.42903 * 116.99628 * 359.72868 * 23 22 21 25 25 C 1.38610 * 119.94569 * 359.52529 * 22 21 20 26 26 C 1.53779 * 113.61315 * 180.02562 * 5 3 2 27 27 H 1.09005 * 109.47046 * 59.99695 * 1 2 3 28 28 H 1.08999 * 109.47628 * 179.97438 * 1 2 3 29 29 H 1.09004 * 109.47251 * 300.00407 * 1 2 3 30 30 H 1.09002 * 113.61241 * 25.41065 * 7 5 3 31 31 H 1.08997 * 113.66623 * 254.45907 * 7 5 3 32 32 H 0.97001 * 119.99782 * 74.12997 * 10 8 7 33 33 H 1.08997 * 109.47012 * 59.99728 * 13 11 10 34 34 H 1.09009 * 109.46644 * 299.99791 * 13 11 10 35 35 H 1.09006 * 109.46530 * 45.00493 * 17 16 15 36 36 H 0.96701 * 113.99927 * 299.99603 * 18 17 16 37 37 H 1.48503 * 110.00002 * 180.02562 * 19 17 16 38 38 H 1.48501 * 110.00158 * 301.32500 * 19 17 16 39 39 H 1.07998 * 119.94948 * 180.02562 * 20 16 15 40 40 H 1.08005 * 119.97275 * 180.25821 * 21 20 16 41 41 H 1.09002 * 109.47382 * 59.99787 * 24 23 22 42 42 H 1.09001 * 109.46938 * 299.99774 * 24 23 22 43 43 H 1.09004 * 109.46926 * 179.97438 * 24 23 22 44 44 H 1.07998 * 120.05916 * 180.23165 * 25 22 21 45 45 H 1.08997 * 113.61410 * 105.47498 * 26 5 3 46 46 H 1.08999 * 113.69199 * 334.57930 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2747 0.0006 6 1 4.0234 0.6363 0.7566 7 6 4.1937 1.1216 -1.3970 8 6 5.1815 2.2265 -0.9867 9 1 6.0817 1.8492 -0.5015 10 7 5.4709 3.1826 -2.0583 11 6 6.6575 3.1411 -2.6959 12 8 7.4859 2.3126 -2.3824 13 6 6.9555 4.1250 -3.7979 14 8 8.2658 3.8807 -4.3131 15 6 8.6928 4.6865 -5.3207 16 6 9.9546 4.5045 -5.8681 17 6 10.8522 3.4130 -5.3445 18 8 11.3872 3.8028 -4.0781 19 14 12.2467 3.1259 -6.5460 20 6 10.3891 5.3233 -6.8931 21 6 9.5670 6.3221 -7.3781 22 6 8.3059 6.5115 -6.8304 23 8 7.4992 7.4968 -7.3051 24 6 8.0160 8.3039 -8.3652 25 6 7.8676 5.6913 -5.8026 26 6 4.1078 2.7140 0.0011 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3634 -1.0276 -0.0005 29 1 -0.3634 0.5139 0.8900 30 1 3.5269 1.4116 -2.2091 31 1 4.6656 0.1529 -1.5610 32 1 4.8085 3.8453 -2.3089 33 1 6.9042 5.1395 -3.4028 34 1 6.2230 4.0086 -4.5968 35 1 10.2772 2.4942 -5.2288 36 1 11.9117 4.6148 -4.1058 37 1 13.1387 2.0512 -6.0414 38 1 11.7023 2.7509 -7.8758 39 1 11.3715 5.1798 -7.3182 40 1 9.9072 6.9580 -8.1820 41 1 8.2443 7.6729 -9.2242 42 1 8.9245 8.8048 -8.0307 43 1 7.2733 9.0494 -8.6495 44 1 6.8852 5.8347 -5.3776 45 1 4.5106 3.0286 0.9639 46 1 3.4184 3.4415 -0.4274 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_4974312.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:36:53 Heat of formation + Delta-G solvation = -159.048448 kcal Electronic energy + Delta-G solvation = -30604.844984 eV Core-core repulsion = 26042.800786 eV Total energy + Delta-G solvation = -4562.044198 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.149 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.03141 -41.75140 -40.87022 -40.00764 -39.10486 -38.12728 -37.33369 -36.82992 -34.67308 -32.27504 -31.46724 -29.94643 -29.08857 -28.50738 -26.98245 -26.71243 -26.05503 -23.85140 -22.57112 -22.43021 -21.70284 -20.74991 -19.95835 -18.99878 -18.48357 -18.02977 -17.93902 -17.67983 -17.53228 -17.40149 -17.15274 -16.76976 -16.52010 -16.42542 -16.24991 -15.84334 -15.48131 -15.26449 -15.12818 -14.63932 -14.45860 -14.38384 -14.24470 -13.82360 -13.73452 -13.67094 -13.44652 -13.40067 -13.19285 -13.07309 -12.65317 -12.56150 -12.39700 -12.15707 -12.03942 -11.91533 -11.81715 -11.74077 -11.65556 -11.40195 -10.87900 -10.21972 -10.21826 -9.69802 -9.07860 -4.96656 0.20891 0.32629 1.10980 1.35422 1.41211 1.46766 1.71410 1.73049 2.08887 2.15203 2.55352 2.58922 3.11544 3.18240 3.45610 3.53046 3.63562 3.64016 3.70117 3.79481 3.87953 3.91368 3.93772 4.01829 4.03327 4.13384 4.13962 4.20811 4.24628 4.34599 4.38494 4.40211 4.42620 4.49103 4.51921 4.56609 4.67871 4.73171 4.75918 4.94957 5.02648 5.22203 5.26837 5.31354 5.36634 5.45068 6.10099 6.27613 6.36144 6.69279 6.81148 7.07115 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.109 4.109 6 H 0.133 0.867 7 C -0.134 4.134 8 C 0.128 3.872 9 H 0.126 0.874 10 N -0.718 5.718 11 C 0.518 3.482 12 O -0.506 6.506 13 C 0.036 3.964 14 O -0.272 6.272 15 C 0.192 3.808 16 C -0.185 4.185 17 C -0.051 4.051 18 O -0.533 6.533 19 Si 0.679 3.321 20 C -0.034 4.034 21 C -0.239 4.239 22 C 0.174 3.826 23 O -0.315 6.315 24 C 0.025 3.975 25 C -0.248 4.248 26 C -0.126 4.126 27 H 0.063 0.937 28 H 0.104 0.896 29 H 0.064 0.936 30 H 0.092 0.908 31 H 0.091 0.909 32 H 0.405 0.595 33 H 0.098 0.902 34 H 0.096 0.904 35 H 0.113 0.887 36 H 0.373 0.627 37 H -0.254 1.254 38 H -0.257 1.257 39 H 0.139 0.861 40 H 0.136 0.864 41 H 0.059 0.941 42 H 0.060 0.940 43 H 0.103 0.897 44 H 0.138 0.862 45 H 0.090 0.910 46 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.299 4.207 -2.528 5.078 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.393 6.393 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.173 4.173 8 C 0.023 3.977 9 H 0.144 0.856 10 N -0.372 5.372 11 C 0.303 3.697 12 O -0.379 6.379 13 C -0.043 4.043 14 O -0.183 6.183 15 C 0.145 3.855 16 C -0.187 4.187 17 C -0.162 4.162 18 O -0.337 6.337 19 Si 0.581 3.419 20 C -0.052 4.052 21 C -0.258 4.258 22 C 0.128 3.872 23 O -0.228 6.228 24 C -0.070 4.070 25 C -0.267 4.267 26 C -0.164 4.164 27 H 0.082 0.918 28 H 0.122 0.878 29 H 0.083 0.917 30 H 0.110 0.890 31 H 0.110 0.890 32 H 0.240 0.760 33 H 0.115 0.885 34 H 0.113 0.887 35 H 0.131 0.869 36 H 0.219 0.781 37 H -0.179 1.179 38 H -0.182 1.182 39 H 0.156 0.844 40 H 0.154 0.846 41 H 0.077 0.923 42 H 0.078 0.922 43 H 0.121 0.879 44 H 0.156 0.844 45 H 0.109 0.891 46 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -0.909 2.660 -2.496 3.759 hybrid contribution -1.425 0.485 -0.166 1.514 sum -2.334 3.145 -2.662 4.735 Atomic orbital electron populations 1.23332 0.75881 1.04067 1.02706 1.86521 1.23761 1.33249 1.83730 1.23459 0.91553 0.81438 0.72043 1.90682 1.66992 1.36429 1.45154 1.22337 0.87738 1.00979 1.01826 0.84957 1.23496 0.97922 1.01272 0.94628 1.22469 0.97945 0.89427 0.87841 0.85645 1.45756 1.17207 1.36671 1.37519 1.20041 0.82049 0.84892 0.82741 1.90805 1.45922 1.36944 1.64226 1.22528 0.85383 0.99645 0.96711 1.86261 1.30930 1.53388 1.47769 1.18401 0.92056 0.88348 0.86692 1.19602 0.94723 1.03036 1.01302 1.24852 1.01198 0.97426 0.92725 1.86598 1.71161 1.46872 1.29078 0.95338 0.81179 0.88120 0.77245 1.20590 0.98524 0.92615 0.93433 1.21133 0.94926 1.03998 1.05769 1.18682 0.89105 0.87527 0.91896 1.86081 1.42212 1.43039 1.51444 1.23151 1.01102 0.94262 0.88440 1.20399 1.02611 1.00447 1.03242 1.23383 0.97025 0.94982 1.00986 0.91778 0.87801 0.91686 0.88971 0.89038 0.76040 0.88457 0.88651 0.86920 0.78104 1.17885 1.18219 0.84365 0.84640 0.92257 0.92154 0.87893 0.84415 0.89108 0.87794 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.45 10.56 -39.24 -0.41 -0.86 16 3 C 0.47 0.64 7.49 36.01 0.27 0.91 16 4 O -0.51 -2.00 15.65 -18.75 -0.29 -2.29 16 5 C -0.11 0.16 4.26 -90.86 -0.39 -0.23 16 6 H 0.13 -0.40 8.14 -51.93 -0.42 -0.82 16 7 C -0.13 0.21 7.44 -25.83 -0.19 0.02 16 8 C 0.13 -0.17 4.21 -67.10 -0.28 -0.45 16 9 H 0.13 -0.02 7.50 -51.93 -0.39 -0.41 16 10 N -0.72 1.12 5.36 -52.99 -0.28 0.83 16 11 C 0.52 0.83 7.91 -10.99 -0.09 0.74 16 12 O -0.51 -3.28 16.12 -14.35 -0.23 -3.51 16 13 C 0.04 -0.01 5.22 36.01 0.19 0.18 16 14 O -0.27 -0.96 8.99 -39.32 -0.35 -1.32 16 15 C 0.19 0.48 6.66 -39.24 -0.26 0.21 16 16 C -0.19 -0.33 5.27 -104.45 -0.55 -0.88 16 17 C -0.05 -0.11 2.37 36.01 0.09 -0.03 16 18 O -0.53 -1.56 12.88 -35.23 -0.45 -2.02 16 19 Si 0.68 0.13 29.91 -169.99 -5.08 -4.95 16 20 C -0.03 0.01 8.65 -39.63 -0.34 -0.33 16 21 C -0.24 0.05 9.04 -39.41 -0.36 -0.31 16 22 C 0.17 0.20 6.68 -39.24 -0.26 -0.06 16 23 O -0.31 -0.27 10.50 -19.44 -0.20 -0.48 16 24 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 25 C -0.25 -0.31 8.97 -39.29 -0.35 -0.66 16 26 C -0.13 0.26 7.16 -25.90 -0.19 0.07 16 27 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 28 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 29 H 0.06 -0.04 8.13 -51.93 -0.42 -0.47 16 30 H 0.09 -0.13 8.10 -51.93 -0.42 -0.55 16 31 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 32 H 0.40 -1.75 8.71 -40.82 -0.36 -2.11 16 33 H 0.10 -0.25 7.66 -51.93 -0.40 -0.65 16 34 H 0.10 -0.25 7.66 -51.92 -0.40 -0.65 16 35 H 0.11 0.47 7.82 -51.93 -0.41 0.07 16 36 H 0.37 -0.59 8.70 45.56 0.40 -0.20 16 37 H -0.25 -0.92 7.11 56.52 0.40 -0.51 16 38 H -0.26 -0.61 7.11 56.52 0.40 -0.21 16 39 H 0.14 -0.41 5.12 -52.49 -0.27 -0.68 16 40 H 0.14 -0.33 6.29 -52.48 -0.33 -0.66 16 41 H 0.06 -0.20 7.65 -51.93 -0.40 -0.59 16 42 H 0.06 -0.21 7.67 -51.93 -0.40 -0.61 16 43 H 0.10 -0.41 8.14 -51.93 -0.42 -0.83 16 44 H 0.14 -0.09 6.30 -52.49 -0.33 -0.42 16 45 H 0.09 -0.24 8.14 -51.93 -0.42 -0.67 16 46 H 0.10 -0.16 7.41 -51.93 -0.38 -0.55 16 LS Contribution 389.46 15.07 5.87 5.87 Total: 0.00 -12.51 389.46 -8.35 -20.86 By element: Atomic # 1 Polarization: -7.04 SS G_CDS: -6.24 Total: -13.28 kcal Atomic # 6 Polarization: 1.80 SS G_CDS: -0.66 Total: 1.14 kcal Atomic # 7 Polarization: 1.12 SS G_CDS: -0.28 Total: 0.83 kcal Atomic # 8 Polarization: -8.52 SS G_CDS: -1.95 Total: -10.48 kcal Atomic # 14 Polarization: 0.13 SS G_CDS: -5.08 Total: -4.95 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -12.51 -8.35 -20.86 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_4974312.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -138.192 kcal (2) G-P(sol) polarization free energy of solvation -12.510 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -150.702 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.346 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.856 kcal (6) G-S(sol) free energy of system = (1) + (5) -159.048 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds