Wall clock time and date at job start Sat Mar 6 2021 15:36:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34225 * 117.00095 * 2 1 4 4 O 1.20824 * 120.00306 * 0.02562 * 3 2 1 5 5 C 1.50705 * 119.99791 * 179.97438 * 3 2 1 6 6 H 1.08995 * 112.85252 * 311.20433 * 5 3 2 7 7 C 1.53959 * 113.66335 * 82.44429 * 5 3 2 8 8 C 1.53780 * 87.02074 * 139.93050 * 7 5 3 9 9 H 1.09002 * 113.61174 * 89.22888 * 8 7 5 10 10 N 1.46500 * 113.61728 * 220.04900 * 8 7 5 11 11 C 1.34769 * 119.99915 * 254.13879 * 10 8 7 12 12 O 1.21282 * 120.00277 * 359.97438 * 11 10 8 13 13 C 1.50704 * 120.00125 * 180.02562 * 11 10 8 14 14 O 1.42899 * 109.47357 * 179.97438 * 13 11 10 15 15 C 1.35896 * 117.00077 * 179.97438 * 14 13 11 16 16 C 1.38750 * 120.03049 * 180.02562 * 15 14 13 17 17 C 1.50705 * 119.97117 * 359.96930 * 16 15 14 18 18 O 1.42898 * 109.47207 * 285.00734 * 17 16 15 19 19 Si 1.86295 * 109.47197 * 165.00408 * 17 16 15 20 20 C 1.38189 * 120.05864 * 179.97438 * 16 15 14 21 21 C 1.38154 * 120.10792 * 359.79026 * 20 16 15 22 22 C 1.38792 * 120.05443 * 0.45638 * 21 20 16 23 23 O 1.35904 * 120.02989 * 179.79393 * 22 21 20 24 24 C 1.42903 * 116.99628 * 359.72868 * 23 22 21 25 25 C 1.38610 * 119.94569 * 359.52529 * 22 21 20 26 26 C 1.53779 * 113.61315 * 180.02562 * 5 3 2 27 27 H 1.09005 * 109.47046 * 59.99695 * 1 2 3 28 28 H 1.08999 * 109.47628 * 179.97438 * 1 2 3 29 29 H 1.09004 * 109.47251 * 300.00407 * 1 2 3 30 30 H 1.09002 * 113.61241 * 25.41065 * 7 5 3 31 31 H 1.08997 * 113.66623 * 254.45907 * 7 5 3 32 32 H 0.97001 * 119.99782 * 74.12997 * 10 8 7 33 33 H 1.08997 * 109.47012 * 59.99728 * 13 11 10 34 34 H 1.09009 * 109.46644 * 299.99791 * 13 11 10 35 35 H 1.09006 * 109.46530 * 45.00493 * 17 16 15 36 36 H 0.96701 * 113.99927 * 299.99603 * 18 17 16 37 37 H 1.48503 * 110.00002 * 180.02562 * 19 17 16 38 38 H 1.48501 * 110.00158 * 301.32500 * 19 17 16 39 39 H 1.07998 * 119.94948 * 180.02562 * 20 16 15 40 40 H 1.08005 * 119.97275 * 180.25821 * 21 20 16 41 41 H 1.09002 * 109.47382 * 59.99787 * 24 23 22 42 42 H 1.09001 * 109.46938 * 299.99774 * 24 23 22 43 43 H 1.09004 * 109.46926 * 179.97438 * 24 23 22 44 44 H 1.07998 * 120.05916 * 180.23165 * 25 22 21 45 45 H 1.08997 * 113.61410 * 105.47498 * 26 5 3 46 46 H 1.08999 * 113.69199 * 334.57930 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2747 0.0006 6 1 4.0234 0.6363 0.7566 7 6 4.1937 1.1216 -1.3970 8 6 5.1815 2.2265 -0.9867 9 1 6.0817 1.8492 -0.5015 10 7 5.4709 3.1826 -2.0583 11 6 6.6575 3.1411 -2.6959 12 8 7.4859 2.3126 -2.3824 13 6 6.9555 4.1250 -3.7979 14 8 8.2658 3.8807 -4.3131 15 6 8.6928 4.6865 -5.3207 16 6 9.9546 4.5045 -5.8681 17 6 10.8522 3.4130 -5.3445 18 8 11.3872 3.8028 -4.0781 19 14 12.2467 3.1259 -6.5460 20 6 10.3891 5.3233 -6.8931 21 6 9.5670 6.3221 -7.3781 22 6 8.3059 6.5115 -6.8304 23 8 7.4992 7.4968 -7.3051 24 6 8.0160 8.3039 -8.3652 25 6 7.8676 5.6913 -5.8026 26 6 4.1078 2.7140 0.0011 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3634 -1.0276 -0.0005 29 1 -0.3634 0.5139 0.8900 30 1 3.5269 1.4116 -2.2091 31 1 4.6656 0.1529 -1.5610 32 1 4.8085 3.8453 -2.3089 33 1 6.9042 5.1395 -3.4028 34 1 6.2230 4.0086 -4.5968 35 1 10.2772 2.4942 -5.2288 36 1 11.9117 4.6148 -4.1058 37 1 13.1387 2.0512 -6.0414 38 1 11.7023 2.7509 -7.8758 39 1 11.3715 5.1798 -7.3182 40 1 9.9072 6.9580 -8.1820 41 1 8.2443 7.6729 -9.2242 42 1 8.9245 8.8048 -8.0307 43 1 7.2733 9.0494 -8.6495 44 1 6.8852 5.8347 -5.3776 45 1 4.5106 3.0286 0.9639 46 1 3.4184 3.4415 -0.4274 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_4974312.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:36:52 Heat of formation + Delta-G solvation = -162.868916 kcal Electronic energy + Delta-G solvation = -30605.010652 eV Core-core repulsion = 26042.800786 eV Total energy + Delta-G solvation = -4562.209865 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.149 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -42.07458 -41.77925 -40.94467 -40.00141 -39.14936 -38.23223 -37.46177 -36.90858 -34.75389 -32.28473 -31.46513 -29.96234 -29.07063 -28.34809 -26.87965 -26.68187 -26.10734 -23.86775 -22.58533 -22.46198 -21.74950 -20.72514 -19.95280 -19.03436 -18.52618 -18.09901 -18.02539 -17.69908 -17.57244 -17.45060 -17.14733 -16.69336 -16.54991 -16.44135 -16.21096 -15.92938 -15.53531 -15.35678 -15.13104 -14.66319 -14.49623 -14.45637 -14.28817 -13.87608 -13.71447 -13.60468 -13.41900 -13.32299 -13.16785 -13.04007 -12.58561 -12.48388 -12.37320 -12.25903 -12.01146 -11.88440 -11.86076 -11.85489 -11.62466 -11.47156 -11.04576 -10.34667 -10.24226 -9.70180 -9.09984 -5.02676 0.20874 0.30276 1.01937 1.32652 1.35308 1.37609 1.65557 1.73226 1.99477 2.25525 2.56671 2.58619 3.19358 3.26399 3.49502 3.59871 3.61272 3.71829 3.73864 3.83812 3.92498 3.98786 4.01376 4.08560 4.16613 4.23204 4.26023 4.34635 4.39641 4.43601 4.44557 4.47917 4.53401 4.59077 4.61929 4.66043 4.78372 4.79693 4.88635 5.00680 5.02388 5.23740 5.27960 5.29532 5.38802 5.48464 6.11378 6.34191 6.40108 6.61247 6.87395 7.04200 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.365 6.365 3 C 0.472 3.528 4 O -0.535 6.535 5 C -0.106 4.106 6 H 0.150 0.850 7 C -0.130 4.130 8 C 0.125 3.875 9 H 0.113 0.887 10 N -0.701 5.701 11 C 0.517 3.483 12 O -0.564 6.564 13 C 0.033 3.967 14 O -0.304 6.304 15 C 0.173 3.827 16 C -0.202 4.202 17 C -0.068 4.068 18 O -0.557 6.557 19 Si 0.794 3.206 20 C -0.031 4.031 21 C -0.237 4.237 22 C 0.163 3.837 23 O -0.331 6.331 24 C 0.016 3.984 25 C -0.255 4.255 26 C -0.116 4.116 27 H 0.062 0.938 28 H 0.127 0.873 29 H 0.062 0.938 30 H 0.092 0.908 31 H 0.090 0.910 32 H 0.420 0.580 33 H 0.122 0.878 34 H 0.120 0.880 35 H 0.081 0.919 36 H 0.391 0.609 37 H -0.304 1.304 38 H -0.281 1.281 39 H 0.167 0.833 40 H 0.161 0.839 41 H 0.068 0.932 42 H 0.071 0.929 43 H 0.115 0.885 44 H 0.151 0.849 45 H 0.100 0.900 46 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.335 5.594 -3.581 6.775 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.281 6.281 3 C 0.317 3.683 4 O -0.425 6.425 5 C -0.125 4.125 6 H 0.168 0.832 7 C -0.169 4.169 8 C 0.020 3.980 9 H 0.131 0.869 10 N -0.355 5.355 11 C 0.303 3.697 12 O -0.442 6.442 13 C -0.045 4.045 14 O -0.216 6.216 15 C 0.127 3.873 16 C -0.204 4.204 17 C -0.176 4.176 18 O -0.365 6.365 19 Si 0.699 3.301 20 C -0.049 4.049 21 C -0.256 4.256 22 C 0.117 3.883 23 O -0.245 6.245 24 C -0.078 4.078 25 C -0.274 4.274 26 C -0.154 4.154 27 H 0.080 0.920 28 H 0.145 0.855 29 H 0.081 0.919 30 H 0.111 0.889 31 H 0.108 0.892 32 H 0.258 0.742 33 H 0.139 0.861 34 H 0.138 0.862 35 H 0.099 0.901 36 H 0.240 0.760 37 H -0.232 1.232 38 H -0.207 1.207 39 H 0.184 0.816 40 H 0.179 0.821 41 H 0.087 0.913 42 H 0.090 0.910 43 H 0.133 0.867 44 H 0.168 0.832 45 H 0.119 0.881 46 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -1.009 4.101 -3.538 5.509 hybrid contribution -1.506 0.045 0.184 1.518 sum -2.515 4.146 -3.354 5.896 Atomic orbital electron populations 1.23532 0.74982 1.05594 1.02516 1.86524 1.24823 1.33252 1.83461 1.23938 0.92415 0.81014 0.70982 1.90664 1.67838 1.37277 1.46706 1.22454 0.86044 1.01763 1.02286 0.83206 1.23461 0.97635 1.01104 0.94688 1.22439 0.97668 0.89771 0.88093 0.86861 1.45659 1.16591 1.36537 1.36664 1.20441 0.82005 0.84379 0.82826 1.90777 1.47855 1.39388 1.66135 1.22744 0.84782 1.00109 0.96825 1.86217 1.32622 1.54334 1.48438 1.18625 0.92763 0.88909 0.87002 1.19750 0.94765 1.03549 1.02305 1.25132 1.02521 0.96680 0.93291 1.86540 1.71751 1.48200 1.29974 0.94120 0.76885 0.85435 0.73668 1.20866 0.99630 0.91868 0.92492 1.21450 0.94296 1.03919 1.05923 1.18884 0.89738 0.87696 0.92022 1.86058 1.42841 1.43190 1.52386 1.23410 1.02076 0.94382 0.87955 1.20549 1.03091 1.00225 1.03524 1.23326 0.96289 0.94635 1.01132 0.91967 0.85489 0.91912 0.88908 0.89153 0.74195 0.86061 0.86232 0.90114 0.76010 1.23206 1.20730 0.81609 0.82126 0.91326 0.91003 0.86688 0.83157 0.88116 0.87960 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.16 16 2 O -0.36 -1.00 10.56 -51.37 -0.54 -1.54 16 3 C 0.47 1.46 7.49 71.24 0.53 1.99 16 4 O -0.54 -4.55 15.65 21.97 0.34 -4.21 16 5 C -0.11 0.30 4.26 -10.95 -0.05 0.25 16 6 H 0.15 -0.95 8.14 -2.39 -0.02 -0.97 16 7 C -0.13 0.33 7.44 31.18 0.23 0.57 16 8 C 0.13 -0.25 4.21 45.53 0.19 -0.05 16 9 H 0.11 0.13 7.50 -2.39 -0.02 0.11 16 10 N -0.70 1.80 5.36 -439.97 -2.36 -0.56 16 11 C 0.52 2.40 7.91 87.66 0.69 3.09 16 12 O -0.56 -8.85 16.12 16.00 0.26 -8.59 16 13 C 0.03 0.01 5.22 71.24 0.37 0.38 16 14 O -0.30 -2.74 8.99 -73.34 -0.66 -3.40 16 15 C 0.17 1.05 6.66 22.49 0.15 1.20 16 16 C -0.20 -0.86 5.27 -19.75 -0.10 -0.97 16 17 C -0.07 -0.41 2.37 71.24 0.17 -0.24 16 18 O -0.56 -4.21 12.88 -148.98 -1.92 -6.12 16 19 Si 0.79 0.43 29.91 68.60 2.05 2.48 16 20 C -0.03 0.04 8.65 22.24 0.19 0.24 16 21 C -0.24 0.42 9.04 22.38 0.20 0.63 16 22 C 0.16 0.27 6.68 22.49 0.15 0.42 16 23 O -0.33 -0.28 10.50 -92.47 -0.97 -1.25 16 24 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 25 C -0.25 -0.67 8.97 22.46 0.20 -0.47 16 26 C -0.12 0.47 7.16 31.13 0.22 0.69 16 27 H 0.06 -0.06 8.13 -2.38 -0.02 -0.08 16 28 H 0.13 -0.82 8.14 -2.39 -0.02 -0.84 16 29 H 0.06 -0.05 8.13 -2.38 -0.02 -0.07 16 30 H 0.09 -0.24 8.10 -2.39 -0.02 -0.26 16 31 H 0.09 -0.19 8.14 -2.39 -0.02 -0.21 16 32 H 0.42 -3.74 8.71 -92.71 -0.81 -4.54 16 33 H 0.12 -0.62 7.66 -2.39 -0.02 -0.64 16 34 H 0.12 -0.62 7.66 -2.38 -0.02 -0.64 16 35 H 0.08 0.95 7.82 -2.38 -0.02 0.93 16 36 H 0.39 -0.95 8.70 -74.06 -0.64 -1.59 16 37 H -0.30 -2.62 7.11 99.48 0.71 -1.92 16 38 H -0.28 -1.21 7.11 99.48 0.71 -0.50 16 39 H 0.17 -1.33 5.12 -2.91 -0.01 -1.34 16 40 H 0.16 -1.20 6.29 -2.91 -0.02 -1.22 16 41 H 0.07 -0.58 7.65 -2.39 -0.02 -0.60 16 42 H 0.07 -0.64 7.67 -2.39 -0.02 -0.66 16 43 H 0.11 -1.07 8.14 -2.38 -0.02 -1.09 16 44 H 0.15 -0.21 6.30 -2.91 -0.02 -0.23 16 45 H 0.10 -0.58 8.14 -2.39 -0.02 -0.59 16 46 H 0.10 -0.33 7.41 -2.39 -0.02 -0.35 16 Total: 0.00 -31.90 389.46 1.30 -30.60 By element: Atomic # 1 Polarization: -16.92 SS G_CDS: -0.37 Total: -17.30 kcal Atomic # 6 Polarization: 4.41 SS G_CDS: 5.47 Total: 9.88 kcal Atomic # 7 Polarization: 1.80 SS G_CDS: -2.36 Total: -0.56 kcal Atomic # 8 Polarization: -21.62 SS G_CDS: -3.49 Total: -25.11 kcal Atomic # 14 Polarization: 0.43 SS G_CDS: 2.05 Total: 2.48 kcal Total: -31.90 1.30 -30.60 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_4974312.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -132.269 kcal (2) G-P(sol) polarization free energy of solvation -31.899 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -164.169 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.300 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.599 kcal (6) G-S(sol) free energy of system = (1) + (5) -162.869 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds