Wall clock time and date at job start Sat Mar 6 2021 15:36:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45195 * 1 3 3 C 1.34220 * 117.00449 * 2 1 4 4 O 1.20828 * 119.99860 * 359.97438 * 3 2 1 5 5 C 1.50705 * 120.00304 * 180.27955 * 3 2 1 6 6 H 1.08996 * 112.84606 * 50.06078 * 5 3 2 7 7 C 1.53784 * 113.61339 * 181.25545 * 5 3 2 8 8 C 1.53776 * 87.08064 * 139.98017 * 7 5 3 9 9 H 1.09001 * 113.61774 * 89.11188 * 8 7 5 10 10 N 1.46494 * 113.61622 * 219.93485 * 8 7 5 11 11 C 1.34774 * 120.00543 * 205.00032 * 10 8 7 12 12 O 1.21700 * 119.99741 * 354.58634 * 11 10 8 13 13 C 1.46673 * 120.00699 * 174.58072 * 11 10 8 14 14 C 1.37884 * 126.22014 * 4.92499 * 13 11 10 15 15 C 1.39880 * 107.09143 * 179.84277 * 14 13 11 16 16 Br 1.89099 * 126.07568 * 180.15427 * 15 14 13 17 17 C 1.35512 * 107.85161 * 0.41868 * 15 14 13 18 18 C 1.50697 * 125.56933 * 179.75824 * 17 15 14 19 19 O 1.42892 * 109.47151 * 53.38121 * 18 17 15 20 20 Si 1.86300 * 109.47249 * 293.37784 * 18 17 15 21 21 N 1.35599 * 108.85455 * 359.73924 * 17 15 14 22 22 C 1.46499 * 125.67641 * 180.02562 * 21 17 15 23 23 C 1.53780 * 113.61078 * 278.85894 * 5 3 2 24 24 H 1.08998 * 109.47274 * 59.99453 * 1 2 3 25 25 H 1.08998 * 109.47349 * 179.97438 * 1 2 3 26 26 H 1.09007 * 109.47111 * 299.99761 * 1 2 3 27 27 H 1.09000 * 113.61025 * 254.52714 * 7 5 3 28 28 H 1.09002 * 113.61733 * 25.34696 * 7 5 3 29 29 H 0.97007 * 120.00144 * 24.99636 * 10 8 7 30 30 H 1.07999 * 126.45466 * 359.97438 * 14 13 11 31 31 H 1.08999 * 109.46624 * 173.38132 * 18 17 15 32 32 H 0.96706 * 114.00024 * 179.97438 * 19 18 17 33 33 H 1.48505 * 109.99828 * 304.20917 * 20 18 17 34 34 H 1.48498 * 110.00086 * 65.52808 * 20 18 17 35 35 H 1.08992 * 109.47360 * 273.00417 * 22 21 17 36 36 H 1.09006 * 109.46981 * 33.00288 * 22 21 17 37 37 H 1.08997 * 109.47128 * 153.00100 * 22 21 17 38 38 H 1.08993 * 113.61611 * 334.57211 * 23 5 3 39 39 H 1.09005 * 113.61244 * 105.47164 * 23 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2092 -0.0005 5 6 3.5664 1.2747 -0.0064 6 1 4.0193 0.6546 -0.7799 7 6 4.1080 2.7137 0.0253 8 6 5.1866 2.2026 0.9950 9 1 6.0836 1.8357 0.4963 10 7 5.4830 3.1336 2.0866 11 6 6.6846 3.0970 2.6959 12 8 7.4867 2.2283 2.4079 13 6 7.0256 4.1041 3.7062 14 6 6.1866 5.0817 4.1978 15 6 6.9166 5.8145 5.1394 16 35 6.2782 7.2828 6.1457 17 6 8.1643 5.2892 5.1981 18 6 9.2815 5.7803 6.0822 19 8 8.8299 5.8305 7.4369 20 14 9.8013 7.4843 5.5372 21 7 8.2431 4.2490 4.3317 22 6 9.4268 3.4175 4.1004 23 6 4.1988 1.0871 1.3827 24 1 -0.3634 0.5139 -0.8899 25 1 -0.3634 -1.0276 -0.0005 26 1 -0.3634 0.5138 0.8901 27 1 4.5058 3.0516 -0.9316 28 1 3.4194 3.4296 0.4741 29 1 4.8145 3.7764 2.3708 30 1 5.1587 5.2486 3.9115 31 1 10.1300 5.1002 6.0070 32 1 9.4992 6.1384 8.0635 33 1 10.1770 7.4655 4.1006 34 1 8.6943 8.4486 5.7601 35 1 10.0529 3.8808 3.3379 36 1 9.9923 3.3245 5.0276 37 1 9.1159 2.4286 3.7636 38 1 3.5357 1.3573 2.2045 39 1 4.6700 0.1138 1.5201 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_5000100.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:36:56 Heat of formation + Delta-G solvation = -63.758821 kcal Electronic energy + Delta-G solvation = -25535.931752 eV Core-core repulsion = 21493.903852 eV Total energy + Delta-G solvation = -4042.027900 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.040 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.93302 -41.98035 -40.67057 -39.09999 -37.67345 -37.46281 -35.18896 -34.22929 -32.25338 -30.99667 -29.44581 -27.65093 -27.43400 -26.86658 -26.17011 -23.54602 -22.46483 -21.57816 -20.94574 -20.24303 -19.04385 -18.77845 -18.45968 -18.03526 -17.48622 -17.42602 -16.87407 -16.52349 -16.28862 -15.84342 -15.50740 -15.38645 -14.89524 -14.66216 -14.49966 -14.41542 -14.31658 -13.95407 -13.76268 -13.65293 -13.54997 -13.24175 -13.03586 -12.82137 -12.56034 -12.40791 -12.37399 -11.88014 -11.85950 -11.78915 -11.46527 -11.27910 -10.90722 -10.61404 -10.29298 -9.88561 -9.32409 -5.03029 0.03953 0.57681 0.89205 1.03414 1.17834 1.49744 1.66395 1.71957 2.02136 2.08593 2.23252 3.15420 3.19351 3.27242 3.45879 3.61026 3.65502 3.71420 3.72931 3.95172 3.99651 4.15876 4.23712 4.24511 4.26128 4.30522 4.43339 4.52603 4.56841 4.59004 4.63657 4.66509 4.80145 4.89245 5.00281 5.18250 5.30425 5.38301 5.49841 5.72866 6.27413 6.62035 6.86816 6.91617 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.363 6.363 3 C 0.470 3.530 4 O -0.537 6.537 5 C -0.104 4.104 6 H 0.155 0.845 7 C -0.120 4.120 8 C 0.130 3.870 9 H 0.124 0.876 10 N -0.695 5.695 11 C 0.596 3.404 12 O -0.567 6.567 13 C -0.050 4.050 14 C -0.112 4.112 15 C -0.184 4.184 16 Br -0.014 7.014 17 C 0.079 3.921 18 C -0.053 4.053 19 O -0.547 6.547 20 Si 0.763 3.237 21 N -0.398 5.398 22 C 0.052 3.948 23 C -0.130 4.130 24 H 0.062 0.938 25 H 0.128 0.872 26 H 0.060 0.940 27 H 0.102 0.898 28 H 0.097 0.903 29 H 0.415 0.585 30 H 0.176 0.824 31 H 0.101 0.899 32 H 0.408 0.592 33 H -0.306 1.306 34 H -0.254 1.254 35 H 0.091 0.909 36 H 0.112 0.888 37 H 0.103 0.897 38 H 0.088 0.912 39 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.754 -1.284 0.591 4.011 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.279 6.279 3 C 0.315 3.685 4 O -0.427 6.427 5 C -0.123 4.123 6 H 0.173 0.827 7 C -0.158 4.158 8 C 0.025 3.975 9 H 0.142 0.858 10 N -0.346 5.346 11 C 0.384 3.616 12 O -0.447 6.447 13 C -0.165 4.165 14 C -0.139 4.139 15 C -0.269 4.269 16 Br 0.070 6.930 17 C -0.042 4.042 18 C -0.162 4.162 19 O -0.357 6.357 20 Si 0.665 3.335 21 N -0.072 5.072 22 C -0.088 4.088 23 C -0.168 4.168 24 H 0.080 0.920 25 H 0.146 0.854 26 H 0.079 0.921 27 H 0.120 0.880 28 H 0.115 0.885 29 H 0.253 0.747 30 H 0.193 0.807 31 H 0.119 0.881 32 H 0.261 0.739 33 H -0.234 1.234 34 H -0.178 1.178 35 H 0.109 0.891 36 H 0.130 0.870 37 H 0.122 0.878 38 H 0.106 0.894 39 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 3.451 -0.875 -0.130 3.563 hybrid contribution -1.048 -0.482 -0.305 1.193 sum 2.403 -1.357 -0.435 2.794 Atomic orbital electron populations 1.23524 0.75059 1.05590 1.02448 1.86518 1.24739 1.33199 1.83461 1.24002 0.92540 0.81006 0.70962 1.90673 1.67903 1.37374 1.46730 1.22431 0.85876 1.01504 1.02498 0.82748 1.23347 0.96390 0.94756 1.01305 1.22550 0.97973 0.89735 0.87237 0.85803 1.45547 1.14790 1.38512 1.35746 1.16873 0.82411 0.82542 0.79745 1.90784 1.50419 1.38002 1.65533 1.20140 0.87345 1.03647 1.05336 1.21540 1.00444 0.94524 0.97393 1.21025 0.96546 1.03018 1.06355 1.96629 1.87009 1.37915 1.71448 1.20123 0.96210 0.91087 0.96829 1.24287 0.94029 1.12061 0.85796 1.86500 1.43921 1.90615 1.14671 0.95196 0.84120 0.74174 0.80025 1.43959 1.10994 1.22949 1.29291 1.22650 0.85009 0.96241 1.04876 1.23457 0.97542 1.01213 0.94629 0.91967 0.85426 0.92089 0.87959 0.88487 0.74743 0.80697 0.88144 0.73935 1.23376 1.17818 0.89062 0.86985 0.87841 0.89378 0.88541 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.16 16 2 O -0.36 -0.90 10.56 -51.32 -0.54 -1.44 16 3 C 0.47 1.43 7.48 71.24 0.53 1.96 16 4 O -0.54 -4.86 15.66 21.96 0.34 -4.51 16 5 C -0.10 0.37 4.25 -11.01 -0.05 0.32 16 6 H 0.15 -1.22 8.14 -2.39 -0.02 -1.24 16 7 C -0.12 0.50 7.15 31.12 0.22 0.72 16 8 C 0.13 -0.39 4.20 45.58 0.19 -0.19 16 9 H 0.12 -0.25 7.53 -2.39 -0.02 -0.27 16 10 N -0.70 0.74 5.34 -443.73 -2.37 -1.63 16 11 C 0.60 2.83 7.77 86.45 0.67 3.50 16 12 O -0.57 -5.38 14.23 -4.35 -0.06 -5.44 16 13 C -0.05 -0.27 6.88 40.35 0.28 0.01 16 14 C -0.11 -0.49 10.34 22.58 0.23 -0.26 16 15 C -0.18 -1.29 6.11 22.04 0.13 -1.16 16 16 Br -0.01 -0.10 30.67 -20.37 -0.62 -0.72 16 17 C 0.08 0.41 5.29 41.35 0.22 0.62 16 18 C -0.05 0.08 2.74 71.23 0.20 0.27 16 19 O -0.55 0.90 12.07 -148.98 -1.80 -0.90 16 20 Si 0.76 -1.47 31.54 68.60 2.16 0.70 16 21 N -0.40 -1.92 3.16 -519.62 -1.64 -3.56 16 22 C 0.05 -0.02 10.35 127.77 1.32 1.30 16 23 C -0.13 0.44 7.45 31.18 0.23 0.67 16 24 H 0.06 -0.04 8.13 -2.39 -0.02 -0.06 16 25 H 0.13 -0.83 8.14 -2.39 -0.02 -0.85 16 26 H 0.06 -0.03 8.14 -2.38 -0.02 -0.05 16 27 H 0.10 -0.63 8.14 -2.39 -0.02 -0.65 16 28 H 0.10 -0.20 7.43 -2.39 -0.02 -0.22 16 29 H 0.42 -1.93 7.63 -92.70 -0.71 -2.63 16 30 H 0.18 -0.20 7.45 -2.91 -0.02 -0.22 16 31 H 0.10 -0.70 6.51 -2.39 -0.02 -0.72 16 32 H 0.41 -5.03 8.74 -74.05 -0.65 -5.68 16 33 H -0.31 -1.72 7.11 99.48 0.71 -1.02 16 34 H -0.25 -1.00 6.01 99.48 0.60 -0.40 16 35 H 0.09 -0.22 8.14 -2.39 -0.02 -0.24 16 36 H 0.11 -0.63 7.03 -2.38 -0.02 -0.65 16 37 H 0.10 0.26 6.05 -2.39 -0.01 0.25 16 38 H 0.09 -0.19 8.09 -2.39 -0.02 -0.21 16 39 H 0.10 -0.39 8.14 -2.38 -0.02 -0.40 16 Total: 0.00 -24.41 350.39 0.54 -23.87 By element: Atomic # 1 Polarization: -14.97 SS G_CDS: -0.31 Total: -15.28 kcal Atomic # 6 Polarization: 3.55 SS G_CDS: 5.38 Total: 8.93 kcal Atomic # 7 Polarization: -1.18 SS G_CDS: -4.02 Total: -5.19 kcal Atomic # 8 Polarization: -10.24 SS G_CDS: -2.06 Total: -12.30 kcal Atomic # 14 Polarization: -1.47 SS G_CDS: 2.16 Total: 0.70 kcal Atomic # 35 Polarization: -0.10 SS G_CDS: -0.62 Total: -0.72 kcal Total: -24.41 0.54 -23.87 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_5000100.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.892 kcal (2) G-P(sol) polarization free energy of solvation -24.405 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.297 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.539 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.867 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.759 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds