Wall clock time and date at job start Sat Mar 6 2021 15:36:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34227 * 117.00182 * 2 1 4 4 O 1.20823 * 120.00039 * 359.97438 * 3 2 1 5 5 C 1.50708 * 120.00008 * 180.02562 * 3 2 1 6 6 H 1.08993 * 112.84844 * 311.19741 * 5 3 2 7 7 C 1.53960 * 113.74147 * 82.39942 * 5 3 2 8 8 C 1.53782 * 87.01641 * 139.94243 * 7 5 3 9 9 H 1.09000 * 113.61413 * 89.22523 * 8 7 5 10 10 N 1.46492 * 113.61604 * 220.04677 * 8 7 5 11 11 C 1.34781 * 119.99984 * 254.13711 * 10 8 7 12 12 O 1.21279 * 119.99931 * 0.02562 * 11 10 8 13 13 C 1.50708 * 119.99858 * 179.97438 * 11 10 8 14 14 O 1.42902 * 109.46970 * 180.02562 * 13 11 10 15 15 C 1.35986 * 116.99897 * 180.02562 * 14 13 11 16 16 C 1.39150 * 120.07533 * 179.97438 * 15 14 13 17 17 O 1.35996 * 120.06970 * 0.04141 * 16 15 14 18 18 C 1.42910 * 116.99963 * 179.97438 * 17 16 15 19 19 C 1.38561 * 119.86074 * 180.02562 * 16 15 14 20 20 C 1.38247 * 119.99676 * 0.02562 * 19 16 15 21 21 C 1.50694 * 119.92713 * 180.02562 * 20 19 16 22 22 O 1.42905 * 109.47157 * 64.99867 * 21 20 19 23 23 Si 1.86303 * 109.47184 * 184.99807 * 21 20 19 24 24 C 1.38254 * 120.14245 * 359.74288 * 20 19 16 25 25 C 1.38238 * 120.15025 * 0.51541 * 24 20 19 26 26 C 1.53780 * 113.61290 * 179.97438 * 5 3 2 27 27 H 1.08990 * 109.47233 * 179.97438 * 1 2 3 28 28 H 1.09004 * 109.47157 * 300.00439 * 1 2 3 29 29 H 1.09003 * 109.46816 * 59.99728 * 1 2 3 30 30 H 1.09000 * 113.61445 * 25.42947 * 7 5 3 31 31 H 1.09000 * 113.66753 * 254.47138 * 7 5 3 32 32 H 0.96998 * 120.00427 * 74.14369 * 10 8 7 33 33 H 1.08995 * 109.47036 * 60.00274 * 13 11 10 34 34 H 1.08999 * 109.47097 * 300.00525 * 13 11 10 35 35 H 1.08998 * 109.46848 * 60.00277 * 18 17 16 36 36 H 1.09000 * 109.47018 * 179.97438 * 18 17 16 37 37 H 1.09000 * 109.46792 * 299.99909 * 18 17 16 38 38 H 1.08000 * 120.00580 * 180.02562 * 19 16 15 39 39 H 1.08998 * 109.47302 * 304.99794 * 21 20 19 40 40 H 0.96705 * 113.99969 * 179.97438 * 22 21 20 41 41 H 1.48502 * 110.00117 * 178.68421 * 23 21 20 42 42 H 1.48499 * 109.99959 * 299.99958 * 23 21 20 43 43 H 1.08000 * 119.92248 * 180.25193 * 24 20 19 44 44 H 1.08002 * 120.00519 * 179.76978 * 25 24 20 45 45 H 1.09001 * 113.60961 * 105.38843 * 26 5 3 46 46 H 1.08996 * 113.69520 * 334.49628 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2748 -0.0006 6 1 4.0240 0.6361 0.7549 7 6 4.1946 1.1213 -1.3978 8 6 5.1821 2.2263 -0.9870 9 1 6.0819 1.8492 -0.5011 10 7 5.4722 3.1822 -2.0585 11 6 6.6593 3.1407 -2.6954 12 8 7.4871 2.3117 -2.3817 13 6 6.9576 4.1236 -3.7982 14 8 8.2679 3.8787 -4.3131 15 6 8.6957 4.6848 -5.3212 16 6 9.9615 4.5032 -5.8699 17 8 10.7731 3.5185 -5.3997 18 6 12.0586 3.3901 -6.0109 19 6 10.3931 5.3275 -6.8966 20 6 9.5669 6.3282 -7.3733 21 6 10.0377 7.2235 -8.4903 22 8 10.2142 6.4497 -9.6787 23 14 8.7689 8.5527 -8.7976 24 6 8.3074 6.5056 -6.8313 25 6 7.8728 5.6901 -5.8033 26 6 4.1078 2.7141 -0.0011 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3634 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 3.5284 1.4113 -2.2103 31 1 4.6667 0.1526 -1.5613 32 1 4.8101 3.8450 -2.3097 33 1 6.9055 5.1385 -3.4041 34 1 6.2257 4.0062 -4.5973 35 1 12.6170 4.3171 -5.8806 36 1 12.6029 2.5697 -5.5433 37 1 11.9363 3.1860 -7.0746 38 1 11.3749 5.1884 -7.3245 39 1 10.9858 7.6836 -8.2122 40 1 10.5166 6.9626 -10.4407 41 1 9.2359 9.4611 -9.8755 42 1 7.4716 7.9383 -9.1777 43 1 7.6634 7.2859 -7.2092 44 1 6.8899 5.8331 -5.3791 45 1 4.5100 3.0296 0.9616 46 1 3.4188 3.4411 -0.4308 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_60476.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:36:59 Heat of formation + Delta-G solvation = -154.809551 kcal Electronic energy + Delta-G solvation = -30250.311707 eV Core-core repulsion = 25688.451322 eV Total energy + Delta-G solvation = -4561.860385 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.149 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.01306 -41.68524 -40.82158 -39.61114 -38.89632 -38.64836 -37.33651 -37.07705 -34.65658 -32.12441 -31.42911 -30.03633 -29.12222 -28.40480 -26.97165 -26.76636 -26.07778 -23.67819 -22.68966 -22.23054 -21.67917 -20.73328 -19.68965 -18.97997 -18.61738 -18.25019 -18.16552 -17.89612 -17.49865 -17.43218 -17.36793 -16.56292 -16.47053 -16.30509 -16.05356 -15.82059 -15.68144 -15.36029 -15.24579 -14.52162 -14.39201 -14.23137 -14.04651 -13.99973 -13.76419 -13.66333 -13.47063 -13.40458 -13.06122 -12.78123 -12.66252 -12.52625 -12.39432 -12.19525 -12.12502 -11.91098 -11.89195 -11.81122 -11.66114 -11.39541 -10.85405 -10.53076 -10.20498 -9.73029 -8.80570 -4.99884 0.22451 0.34925 1.11623 1.24257 1.39426 1.49003 1.56086 1.73475 1.91693 2.35635 2.55899 2.58558 3.12419 3.19312 3.30920 3.47158 3.54102 3.64634 3.70570 3.79882 3.85487 3.94356 3.94706 3.98526 4.13980 4.17564 4.21383 4.25140 4.31676 4.33666 4.37352 4.43470 4.45613 4.50087 4.57213 4.61148 4.67324 4.68753 4.77033 4.96087 5.03587 5.14399 5.32206 5.37530 5.44364 5.59322 5.99836 6.31396 6.39880 6.58575 6.69883 7.09489 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.134 4.134 8 C 0.128 3.872 9 H 0.126 0.874 10 N -0.718 5.718 11 C 0.518 3.482 12 O -0.507 6.507 13 C 0.037 3.963 14 O -0.276 6.276 15 C 0.104 3.896 16 C 0.107 3.893 17 O -0.301 6.301 18 C 0.025 3.975 19 C -0.145 4.145 20 C -0.068 4.068 21 C -0.074 4.074 22 O -0.536 6.536 23 Si 0.685 3.315 24 C -0.111 4.111 25 C -0.169 4.169 26 C -0.126 4.126 27 H 0.104 0.896 28 H 0.064 0.936 29 H 0.063 0.937 30 H 0.092 0.908 31 H 0.091 0.909 32 H 0.405 0.595 33 H 0.096 0.904 34 H 0.094 0.906 35 H 0.056 0.944 36 H 0.103 0.897 37 H 0.056 0.944 38 H 0.139 0.861 39 H 0.076 0.924 40 H 0.380 0.620 41 H -0.262 1.262 42 H -0.254 1.254 43 H 0.133 0.867 44 H 0.140 0.860 45 H 0.090 0.910 46 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.449 3.471 0.382 3.780 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.393 6.393 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.173 4.173 8 C 0.023 3.977 9 H 0.143 0.857 10 N -0.372 5.372 11 C 0.303 3.697 12 O -0.380 6.380 13 C -0.041 4.041 14 O -0.189 6.189 15 C 0.059 3.941 16 C 0.061 3.939 17 O -0.214 6.214 18 C -0.070 4.070 19 C -0.164 4.164 20 C -0.069 4.069 21 C -0.184 4.184 22 O -0.344 6.344 23 Si 0.586 3.414 24 C -0.129 4.129 25 C -0.188 4.188 26 C -0.164 4.164 27 H 0.122 0.878 28 H 0.083 0.917 29 H 0.082 0.918 30 H 0.110 0.890 31 H 0.110 0.890 32 H 0.240 0.760 33 H 0.114 0.886 34 H 0.112 0.888 35 H 0.074 0.926 36 H 0.121 0.879 37 H 0.075 0.925 38 H 0.157 0.843 39 H 0.094 0.906 40 H 0.227 0.773 41 H -0.187 1.187 42 H -0.179 1.179 43 H 0.150 0.850 44 H 0.158 0.842 45 H 0.109 0.891 46 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -1.716 2.730 0.671 3.293 hybrid contribution -0.038 0.191 -1.370 1.384 sum -1.753 2.921 -0.699 3.478 Atomic orbital electron populations 1.23330 0.75885 1.04068 1.02701 1.86522 1.23758 1.33259 1.83728 1.23462 0.91556 0.81433 0.72035 1.90681 1.66992 1.36432 1.45167 1.22338 0.87727 1.00977 1.01864 0.84977 1.23500 0.97914 1.01300 0.94609 1.22448 0.97918 0.89452 0.87866 0.85658 1.45762 1.17200 1.36677 1.37560 1.20076 0.82012 0.84900 0.82731 1.90797 1.46070 1.36917 1.64223 1.22488 0.85649 0.99429 0.96579 1.86271 1.30809 1.53711 1.48104 1.18257 0.91896 0.92888 0.91105 1.18235 0.89289 0.91346 0.95034 1.86247 1.26923 1.49264 1.59007 1.23126 0.82462 1.02801 0.98626 1.20911 1.01685 0.96537 0.97240 1.18925 0.94174 0.97249 0.96531 1.24780 1.07666 1.00150 0.85763 1.86602 1.89731 1.37681 1.20342 0.95008 0.78419 0.79169 0.88772 1.20672 0.95107 0.99874 0.97261 1.20965 1.00368 0.97018 1.00417 1.23367 0.97030 0.94977 1.00990 0.87804 0.91692 0.91776 0.88960 0.89029 0.76048 0.88587 0.88771 0.92571 0.87883 0.92548 0.84335 0.90593 0.77253 1.18687 1.17916 0.84998 0.84210 0.89140 0.87790 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.40 10.56 -39.25 -0.41 -0.81 16 3 C 0.47 0.55 7.49 36.01 0.27 0.82 16 4 O -0.51 -1.89 15.65 -18.75 -0.29 -2.18 16 5 C -0.11 0.18 4.26 -90.86 -0.39 -0.20 16 6 H 0.13 -0.43 8.14 -51.93 -0.42 -0.85 16 7 C -0.13 0.23 7.45 -25.82 -0.19 0.04 16 8 C 0.13 -0.21 4.21 -67.14 -0.28 -0.49 16 9 H 0.13 -0.06 7.50 -51.93 -0.39 -0.45 16 10 N -0.72 1.37 5.36 -53.04 -0.28 1.08 16 11 C 0.52 0.71 7.91 -10.98 -0.09 0.63 16 12 O -0.51 -3.25 16.12 -14.35 -0.23 -3.48 16 13 C 0.04 -0.02 5.22 36.01 0.19 0.17 16 14 O -0.28 -1.12 9.45 -47.32 -0.45 -1.57 16 15 C 0.10 0.33 6.70 -39.12 -0.26 0.07 16 16 C 0.11 0.41 6.70 -39.12 -0.26 0.15 16 17 O -0.30 -1.40 10.28 -34.23 -0.35 -1.75 16 18 C 0.02 0.01 9.81 101.05 0.99 1.00 16 19 C -0.14 -0.33 8.67 -39.46 -0.34 -0.67 16 20 C -0.07 -0.10 5.38 -104.62 -0.56 -0.67 16 21 C -0.07 0.01 2.79 36.00 0.10 0.11 16 22 O -0.54 -0.60 12.81 -35.23 -0.45 -1.05 16 23 Si 0.69 -0.84 29.85 -169.99 -5.07 -5.91 16 24 C -0.11 -0.05 8.66 -39.58 -0.34 -0.39 16 25 C -0.17 -0.06 9.04 -39.46 -0.36 -0.42 16 26 C -0.13 0.30 7.15 -25.94 -0.19 0.11 16 27 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 28 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 29 H 0.06 -0.05 8.13 -51.93 -0.42 -0.48 16 30 H 0.09 -0.15 8.10 -51.93 -0.42 -0.57 16 31 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 32 H 0.40 -1.95 8.71 -40.82 -0.36 -2.30 16 33 H 0.10 -0.34 7.66 -51.93 -0.40 -0.74 16 34 H 0.09 -0.30 7.67 -51.93 -0.40 -0.69 16 35 H 0.06 -0.05 7.66 -51.93 -0.40 -0.45 16 36 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 37 H 0.06 -0.01 7.66 -51.93 -0.40 -0.41 16 38 H 0.14 0.13 6.30 -52.49 -0.33 -0.20 16 39 H 0.08 -0.14 7.96 -51.93 -0.41 -0.55 16 40 H 0.38 -1.10 8.74 45.56 0.40 -0.70 16 41 H -0.26 -0.22 7.11 56.52 0.40 0.19 16 42 H -0.25 -0.44 7.04 56.52 0.40 -0.04 16 43 H 0.13 -0.21 4.85 -52.49 -0.25 -0.46 16 44 H 0.14 -0.42 6.30 -52.49 -0.33 -0.75 16 45 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 46 H 0.10 -0.20 7.41 -51.93 -0.38 -0.58 16 LS Contribution 389.74 15.07 5.87 5.87 Total: 0.00 -13.00 389.74 -8.55 -21.56 By element: Atomic # 1 Polarization: -6.81 SS G_CDS: -6.23 Total: -13.05 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: -0.65 Total: 1.29 kcal Atomic # 7 Polarization: 1.37 SS G_CDS: -0.28 Total: 1.08 kcal Atomic # 8 Polarization: -8.66 SS G_CDS: -2.19 Total: -10.85 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: -5.07 Total: -5.91 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -13.00 -8.55 -21.56 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_60476.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -133.252 kcal (2) G-P(sol) polarization free energy of solvation -13.003 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -146.255 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.554 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.557 kcal (6) G-S(sol) free energy of system = (1) + (5) -154.810 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds