Wall clock time and date at job start Sat Mar 6 2021 15:37:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34234 * 116.99947 * 2 1 4 4 O 1.20822 * 120.00090 * 0.02562 * 3 2 1 5 5 C 1.50702 * 119.99997 * 179.72219 * 3 2 1 6 6 H 1.09004 * 112.84690 * 48.80531 * 5 3 2 7 7 C 1.53778 * 113.61409 * 180.02562 * 5 3 2 8 8 C 1.53778 * 87.07880 * 139.98529 * 7 5 3 9 9 H 1.09002 * 113.61677 * 89.12041 * 8 7 5 10 10 N 1.46505 * 113.61217 * 220.01776 * 8 7 5 11 11 C 1.34773 * 120.00009 * 204.99829 * 10 8 7 12 12 O 1.21688 * 120.00108 * 0.02562 * 11 10 8 13 13 C 1.46683 * 119.99979 * 180.02562 * 11 10 8 14 14 C 1.37871 * 126.23550 * 179.69372 * 13 11 10 15 15 C 1.39836 * 107.08685 * 179.84917 * 14 13 11 16 16 C 1.35456 * 107.86231 * 0.41422 * 15 14 13 17 17 C 1.50701 * 125.56284 * 179.77881 * 16 15 14 18 18 O 1.42901 * 109.47087 * 244.95651 * 17 16 15 19 19 Si 1.86301 * 109.47054 * 4.95687 * 17 16 15 20 20 N 1.35536 * 108.87296 * 359.74362 * 16 15 14 21 21 C 1.53779 * 113.61510 * 277.50185 * 5 3 2 22 22 H 1.08997 * 109.46765 * 179.97438 * 1 2 3 23 23 H 1.08997 * 109.46967 * 299.99772 * 1 2 3 24 24 H 1.09002 * 109.46640 * 59.99976 * 1 2 3 25 25 H 1.09001 * 113.61184 * 254.53062 * 7 5 3 26 26 H 1.09000 * 113.61632 * 25.34717 * 7 5 3 27 27 H 0.97006 * 119.99748 * 24.99964 * 10 8 7 28 28 H 1.08004 * 126.45238 * 359.95884 * 14 13 11 29 29 H 1.07997 * 126.07039 * 180.13845 * 15 14 13 30 30 H 1.09002 * 109.47081 * 124.95666 * 17 16 15 31 31 H 0.96705 * 113.99497 * 60.00221 * 18 17 16 32 32 H 1.48502 * 109.99718 * 58.68308 * 19 17 16 33 33 H 1.48498 * 110.00037 * 179.97438 * 19 17 16 34 34 H 0.97003 * 125.67520 * 180.02562 * 20 16 15 35 35 H 1.08995 * 113.61442 * 334.56320 * 21 5 3 36 36 H 1.08996 * 113.61596 * 105.46908 * 21 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5663 1.2749 0.0063 6 1 4.0269 0.6347 -0.7462 7 6 4.1077 2.7143 0.0061 8 6 5.1768 2.2285 0.9991 9 1 6.0787 1.8491 0.5187 10 7 5.4613 3.1867 2.0702 11 6 6.6566 3.1664 2.6925 12 8 7.4997 2.3526 2.3644 13 6 6.9413 4.1254 3.7654 14 6 8.1115 4.2153 4.4887 15 6 7.9517 5.2638 5.4000 16 6 6.7107 5.7785 5.2277 17 6 6.1207 6.9242 6.0090 18 8 5.0108 6.4553 6.7773 19 14 7.4135 7.6279 7.1511 20 7 6.0864 5.0956 4.2373 21 6 4.1851 1.1266 1.4063 22 1 -0.3633 -1.0277 -0.0005 23 1 -0.3633 0.5138 0.8900 24 1 -0.3633 0.5139 -0.8900 25 1 4.5149 3.0274 -0.9553 26 1 3.4149 3.4415 0.4294 27 1 4.7893 3.8356 2.3316 28 1 8.9874 3.5941 4.3721 29 1 8.6856 5.6003 6.1173 30 1 5.7843 7.6988 5.3199 31 1 5.2372 5.7628 7.4132 32 1 8.5867 8.0901 6.3668 33 1 6.8444 8.7589 7.9270 34 1 5.1871 5.2629 3.9146 35 1 3.5140 1.4197 2.2136 36 1 4.6547 0.1576 1.5757 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_6580494.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:37:09 Heat of formation + Delta-G solvation = -79.742050 kcal Electronic energy + Delta-G solvation = -21450.224358 eV Core-core repulsion = 17902.858996 eV Total energy + Delta-G solvation = -3547.365363 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.114 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.55755 -41.97005 -40.60854 -39.09188 -37.67276 -37.47377 -34.80499 -32.15729 -31.38896 -29.43955 -27.53172 -26.88832 -26.27258 -23.65802 -22.30504 -21.48857 -21.36488 -20.75376 -19.68295 -19.01378 -18.09387 -18.04020 -17.48548 -16.82500 -16.67640 -16.34034 -15.98489 -15.92638 -15.19793 -15.12464 -14.67598 -14.50831 -14.34977 -14.28432 -13.97209 -13.71353 -13.66711 -13.55581 -13.05222 -12.59060 -12.40956 -12.20995 -12.06694 -11.89354 -11.86671 -11.49064 -11.31948 -10.66007 -10.30808 -10.07431 -9.28709 -4.90807 0.28177 1.01460 1.23483 1.53869 1.59768 1.73458 1.92275 2.05826 2.21802 2.24543 3.18133 3.26666 3.47348 3.58798 3.60942 3.69542 3.76870 3.98956 4.22754 4.25242 4.25593 4.30549 4.42330 4.48261 4.51797 4.56514 4.65692 4.77697 4.87199 4.95085 4.99805 5.11694 5.28385 5.35691 5.59357 5.80178 6.24301 6.41695 6.60298 6.67785 6.98724 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.363 6.363 3 C 0.471 3.529 4 O -0.538 6.538 5 C -0.104 4.104 6 H 0.154 0.846 7 C -0.120 4.120 8 C 0.126 3.874 9 H 0.122 0.878 10 N -0.709 5.709 11 C 0.592 3.408 12 O -0.565 6.565 13 C -0.067 4.067 14 C -0.115 4.115 15 C -0.204 4.204 16 C 0.027 3.973 17 C -0.057 4.057 18 O -0.555 6.555 19 Si 0.807 3.193 20 N -0.515 5.515 21 C -0.129 4.129 22 H 0.128 0.872 23 H 0.061 0.939 24 H 0.061 0.939 25 H 0.100 0.900 26 H 0.096 0.904 27 H 0.408 0.592 28 H 0.149 0.851 29 H 0.171 0.829 30 H 0.114 0.886 31 H 0.399 0.601 32 H -0.286 1.286 33 H -0.296 1.296 34 H 0.426 0.574 35 H 0.088 0.912 36 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.399 -0.887 2.132 2.700 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.279 6.279 3 C 0.316 3.684 4 O -0.427 6.427 5 C -0.124 4.124 6 H 0.171 0.829 7 C -0.158 4.158 8 C 0.021 3.979 9 H 0.139 0.861 10 N -0.359 5.359 11 C 0.381 3.619 12 O -0.443 6.443 13 C -0.181 4.181 14 C -0.142 4.142 15 C -0.228 4.228 16 C -0.092 4.092 17 C -0.166 4.166 18 O -0.363 6.363 19 Si 0.711 3.289 20 N -0.112 5.112 21 C -0.167 4.167 22 H 0.146 0.854 23 H 0.080 0.920 24 H 0.080 0.920 25 H 0.119 0.881 26 H 0.115 0.885 27 H 0.244 0.756 28 H 0.166 0.834 29 H 0.188 0.812 30 H 0.132 0.868 31 H 0.250 0.750 32 H -0.212 1.212 33 H -0.224 1.224 34 H 0.265 0.735 35 H 0.107 0.893 36 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -1.070 -0.072 1.657 1.974 hybrid contribution -1.440 0.398 -0.817 1.703 sum -2.510 0.326 0.840 2.667 Atomic orbital electron populations 1.23529 0.75015 1.05620 1.02450 1.86526 1.24777 1.33153 1.83430 1.23978 0.92490 0.81018 0.70931 1.90664 1.67892 1.37373 1.46798 1.22429 0.86002 1.01553 1.02395 0.82863 1.23341 0.96505 0.94776 1.01205 1.22479 0.97972 0.89592 0.87880 0.86057 1.45755 1.15681 1.37107 1.37402 1.17231 0.81957 0.82230 0.80506 1.90843 1.47577 1.39974 1.65947 1.20347 0.94494 0.98844 1.04367 1.21517 0.96945 0.99464 0.96278 1.20968 0.97010 1.00119 1.04660 1.21367 0.94475 0.98875 0.94452 1.25071 0.98170 0.95121 0.98257 1.86481 1.33768 1.60667 1.55420 0.92965 0.73839 0.81528 0.80560 1.41934 1.15152 1.25842 1.28281 1.23412 0.97572 1.01317 0.94444 0.85407 0.92036 0.91985 0.88137 0.88537 0.75591 0.83368 0.81161 0.86818 0.75036 1.21231 1.22424 0.73467 0.89330 0.88579 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.15 16 2 O -0.36 -0.79 10.57 -51.46 -0.54 -1.34 16 3 C 0.47 1.29 7.48 71.24 0.53 1.83 16 4 O -0.54 -4.58 15.65 21.98 0.34 -4.24 16 5 C -0.10 0.36 4.26 -11.01 -0.05 0.31 16 6 H 0.15 -1.16 8.14 -2.38 -0.02 -1.18 16 7 C -0.12 0.49 7.16 31.12 0.22 0.71 16 8 C 0.13 -0.32 4.24 45.50 0.19 -0.12 16 9 H 0.12 -0.07 7.46 -2.39 -0.02 -0.09 16 10 N -0.71 1.20 5.35 -444.06 -2.38 -1.18 16 11 C 0.59 2.86 7.79 86.45 0.67 3.54 16 12 O -0.56 -7.07 16.48 -4.31 -0.07 -7.15 16 13 C -0.07 -0.18 7.06 40.35 0.28 0.11 16 14 C -0.12 -0.37 10.65 22.57 0.24 -0.13 16 15 C -0.20 0.24 9.32 22.01 0.21 0.45 16 16 C 0.03 -0.06 6.47 41.34 0.27 0.20 16 17 C -0.06 0.25 3.08 71.24 0.22 0.47 16 18 O -0.56 2.19 12.88 -148.98 -1.92 0.27 16 19 Si 0.81 -4.20 30.56 68.60 2.10 -2.10 16 20 N -0.51 1.20 5.99 -171.92 -1.03 0.17 16 21 C -0.13 0.44 7.42 31.11 0.23 0.67 16 22 H 0.13 -0.88 8.14 -2.39 -0.02 -0.90 16 23 H 0.06 -0.07 8.13 -2.39 -0.02 -0.09 16 24 H 0.06 -0.06 8.13 -2.39 -0.02 -0.08 16 25 H 0.10 -0.58 8.14 -2.39 -0.02 -0.60 16 26 H 0.10 -0.24 7.41 -2.39 -0.02 -0.26 16 27 H 0.41 -2.62 7.86 -92.70 -0.73 -3.34 16 28 H 0.15 0.51 8.06 -2.91 -0.02 0.49 16 29 H 0.17 -1.02 6.19 -2.91 -0.02 -1.04 16 30 H 0.11 -0.47 7.96 -2.39 -0.02 -0.49 16 31 H 0.40 -4.47 8.70 -74.05 -0.64 -5.12 16 32 H -0.29 -0.12 7.11 99.48 0.71 0.58 16 33 H -0.30 -0.62 7.11 99.48 0.71 0.09 16 34 H 0.43 -2.92 8.19 -92.71 -0.76 -3.68 16 35 H 0.09 -0.24 8.09 -2.39 -0.02 -0.26 16 36 H 0.10 -0.36 8.14 -2.39 -0.02 -0.38 16 Total: 0.00 -22.52 315.93 -0.23 -22.75 By element: Atomic # 1 Polarization: -15.41 SS G_CDS: -0.95 Total: -16.36 kcal Atomic # 6 Polarization: 4.96 SS G_CDS: 4.22 Total: 9.18 kcal Atomic # 7 Polarization: 2.39 SS G_CDS: -3.41 Total: -1.01 kcal Atomic # 8 Polarization: -10.26 SS G_CDS: -2.19 Total: -12.45 kcal Atomic # 14 Polarization: -4.20 SS G_CDS: 2.10 Total: -2.10 kcal Total: -22.52 -0.23 -22.75 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_6580494.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.995 kcal (2) G-P(sol) polarization free energy of solvation -22.517 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -79.512 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.230 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.747 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.742 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds