Wall clock time and date at job start Sat Mar 6 2021 15:37:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45205 * 1 3 3 C 1.34224 * 117.00077 * 2 1 4 4 O 1.20831 * 120.00050 * 359.97438 * 3 2 1 5 5 C 1.50700 * 120.00152 * 179.97438 * 3 2 1 6 6 H 1.08998 * 112.84858 * 311.19414 * 5 3 2 7 7 C 1.53770 * 113.61570 * 82.50408 * 5 3 2 8 8 C 1.53776 * 87.08455 * 139.98295 * 7 5 3 9 9 H 1.08997 * 113.69396 * 89.12788 * 8 7 5 10 10 N 1.46504 * 113.61366 * 220.01950 * 8 7 5 11 11 C 1.34769 * 120.00171 * 252.49223 * 10 8 7 12 12 O 1.21658 * 119.99940 * 0.02562 * 11 10 8 13 13 C 1.46991 * 120.00296 * 180.02562 * 11 10 8 14 14 C 1.35812 * 125.13936 * 180.02562 * 13 11 10 15 15 C 1.46261 * 106.08858 * 179.74179 * 14 13 11 16 16 C 1.39776 * 134.15018 * 179.51165 * 15 14 13 17 17 C 1.50696 * 120.09242 * 0.68936 * 16 15 14 18 18 O 1.42903 * 109.47131 * 284.72120 * 17 16 15 19 19 Si 1.86305 * 109.47185 * 164.72661 * 17 16 15 20 20 C 1.36629 * 119.81264 * 180.41709 * 16 15 14 21 21 C 1.38770 * 120.49234 * 0.27159 * 20 16 15 22 22 C 1.38267 * 120.68022 * 0.02562 * 21 20 16 23 23 O 1.35966 * 120.11982 * 179.97438 * 22 21 20 24 24 C 1.42900 * 117.00155 * 359.97438 * 23 22 21 25 25 C 1.39443 * 119.75594 * 359.97438 * 22 21 20 26 26 O 1.34774 * 133.24204 * 179.97438 * 25 22 21 27 27 C 1.53780 * 87.08008 * 334.56650 * 8 7 5 28 28 H 1.09001 * 109.46965 * 60.00222 * 1 2 3 29 29 H 1.08999 * 109.47127 * 179.97438 * 1 2 3 30 30 H 1.09002 * 109.47289 * 300.00168 * 1 2 3 31 31 H 1.09000 * 113.61954 * 25.42909 * 7 5 3 32 32 H 1.09002 * 113.61533 * 254.52979 * 7 5 3 33 33 H 0.97004 * 119.99790 * 72.49856 * 10 8 7 34 34 H 1.08002 * 126.95940 * 359.97438 * 14 13 11 35 35 H 1.08999 * 109.47358 * 44.72480 * 17 16 15 36 36 H 0.96700 * 114.00311 * 300.00591 * 18 17 16 37 37 H 1.48499 * 109.99670 * 58.67633 * 19 17 16 38 38 H 1.48497 * 110.00233 * 179.97438 * 19 17 16 39 39 H 1.07994 * 119.75354 * 180.25337 * 20 16 15 40 40 H 1.07999 * 119.66189 * 180.02562 * 21 20 16 41 41 H 1.08997 * 109.47844 * 300.00674 * 24 23 22 42 42 H 1.09006 * 109.46393 * 60.00494 * 24 23 22 43 43 H 1.08998 * 109.46945 * 180.02562 * 24 23 22 44 44 H 1.08997 * 113.61816 * 139.97860 * 27 8 7 45 45 H 1.09005 * 113.61760 * 270.80070 * 27 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2748 0.0006 6 1 4.0233 0.6365 0.7567 7 6 4.1917 1.1232 -1.3960 8 6 5.1815 2.2266 -0.9865 9 1 6.0817 1.8494 -0.5012 10 7 5.4710 3.1826 -2.0582 11 6 6.6691 3.1612 -2.6748 12 8 7.5102 2.3477 -2.3418 13 6 6.9598 4.1208 -3.7497 14 6 8.1276 4.1918 -4.4395 15 6 7.9632 5.2790 -5.4039 16 6 8.7868 5.8479 -6.3795 17 6 10.1764 5.3095 -6.6028 18 8 11.0319 5.7454 -5.5443 19 14 10.8320 5.9379 -8.2296 20 6 8.3262 6.8897 -7.1340 21 6 7.0480 7.3919 -6.9354 22 6 6.2184 6.8487 -5.9718 23 8 4.9682 7.3501 -5.7866 24 6 4.5758 8.4403 -6.6229 25 6 6.6686 5.7849 -5.1908 26 8 6.1071 5.0647 -4.1996 27 6 4.1078 2.7142 0.0006 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3634 0.5139 0.8900 31 1 3.5244 1.4144 -2.2072 32 1 4.6622 0.1539 -1.5609 33 1 4.8002 3.8311 -2.3239 34 1 8.9996 3.5688 -4.3058 35 1 10.1457 4.2201 -6.6199 36 1 11.1068 6.7066 -5.4696 37 1 10.8489 7.4228 -8.2307 38 1 12.2022 5.4146 -8.4613 39 1 8.9619 7.3258 -7.8903 40 1 6.6975 8.2156 -7.5397 41 1 5.2538 9.2795 -6.4680 42 1 4.6150 8.1295 -7.6670 43 1 3.5595 8.7435 -6.3716 44 1 4.5104 3.0292 0.9632 45 1 3.4183 3.4415 -0.4283 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_6672420.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:37:12 Heat of formation + Delta-G solvation = -115.901799 kcal Electronic energy + Delta-G solvation = -31844.354019 eV Core-core repulsion = 27183.266139 eV Total energy + Delta-G solvation = -4661.087880 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.134 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -43.66671 -41.96715 -40.95380 -40.47933 -39.18046 -39.08725 -37.32215 -37.09386 -34.71593 -33.56526 -31.93254 -31.02265 -29.45690 -28.71803 -27.16241 -26.96096 -26.30825 -24.90024 -23.96135 -22.52897 -21.89890 -21.67912 -20.85748 -19.66904 -19.03131 -18.93888 -18.54204 -17.98922 -17.77753 -17.67058 -17.39135 -17.03468 -16.70798 -16.63028 -16.34084 -16.20188 -15.88491 -15.66178 -15.52647 -14.77501 -14.64817 -14.52016 -14.44369 -14.26131 -14.09221 -13.73708 -13.59992 -13.47635 -13.45343 -13.32594 -13.06349 -12.65463 -12.61845 -12.40264 -12.35321 -12.14188 -11.91551 -11.79186 -11.68315 -11.44231 -11.32549 -10.94493 -10.61712 -10.28424 -9.77503 -8.99629 -5.00516 -0.59386 0.11690 0.70324 1.14192 1.20726 1.28943 1.51700 1.62605 1.91392 1.99228 2.02942 2.08017 2.39982 3.12776 3.17867 3.24364 3.37223 3.50382 3.52617 3.60304 3.65433 3.82950 3.86817 3.93057 4.01522 4.08729 4.09060 4.15800 4.17804 4.23243 4.35596 4.44146 4.45150 4.46720 4.48245 4.51828 4.58753 4.69356 4.77356 4.82705 4.88974 4.92699 5.06845 5.22341 5.25796 5.34209 5.38488 5.63281 6.14805 6.31188 6.38672 6.72029 6.90216 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.472 3.528 4 O -0.504 6.504 5 C -0.108 4.108 6 H 0.133 0.867 7 C -0.134 4.134 8 C 0.124 3.876 9 H 0.129 0.871 10 N -0.707 5.707 11 C 0.605 3.395 12 O -0.508 6.508 13 C -0.025 4.025 14 C -0.102 4.102 15 C -0.082 4.082 16 C -0.095 4.095 17 C -0.073 4.073 18 O -0.525 6.525 19 Si 0.692 3.308 20 C -0.096 4.096 21 C -0.178 4.178 22 C 0.151 3.849 23 O -0.310 6.310 24 C 0.024 3.976 25 C 0.047 3.953 26 O -0.174 6.174 27 C -0.127 4.127 28 H 0.064 0.936 29 H 0.104 0.896 30 H 0.064 0.936 31 H 0.093 0.907 32 H 0.093 0.907 33 H 0.411 0.589 34 H 0.175 0.825 35 H 0.119 0.881 36 H 0.375 0.625 37 H -0.258 1.258 38 H -0.255 1.255 39 H 0.140 0.860 40 H 0.147 0.853 41 H 0.060 0.940 42 H 0.061 0.939 43 H 0.105 0.895 44 H 0.091 0.909 45 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.694 1.526 -3.630 4.771 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.314 3.686 4 O -0.392 6.392 5 C -0.128 4.128 6 H 0.151 0.849 7 C -0.172 4.172 8 C 0.019 3.981 9 H 0.147 0.853 10 N -0.357 5.357 11 C 0.391 3.609 12 O -0.384 6.384 13 C -0.076 4.076 14 C -0.123 4.123 15 C -0.083 4.083 16 C -0.095 4.095 17 C -0.183 4.183 18 O -0.331 6.331 19 Si 0.593 3.407 20 C -0.114 4.114 21 C -0.196 4.196 22 C 0.105 3.895 23 O -0.224 6.224 24 C -0.071 4.071 25 C -0.002 4.002 26 O -0.075 6.075 27 C -0.165 4.165 28 H 0.082 0.918 29 H 0.122 0.878 30 H 0.083 0.917 31 H 0.112 0.888 32 H 0.111 0.889 33 H 0.247 0.753 34 H 0.192 0.808 35 H 0.137 0.863 36 H 0.223 0.777 37 H -0.183 1.183 38 H -0.180 1.180 39 H 0.158 0.842 40 H 0.165 0.835 41 H 0.078 0.922 42 H 0.080 0.920 43 H 0.124 0.876 44 H 0.110 0.890 45 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges -2.079 1.036 -3.446 4.156 hybrid contribution -0.407 1.259 0.659 1.478 sum -2.486 2.294 -2.787 4.383 Atomic orbital electron populations 1.23331 0.75891 1.04050 1.02716 1.86519 1.23752 1.33236 1.83760 1.23452 0.91552 0.81451 0.72097 1.90690 1.66971 1.36431 1.45058 1.22300 0.87794 1.00935 1.01774 0.84875 1.23462 0.97892 1.01136 0.94760 1.22566 0.98215 0.89473 0.87844 0.85298 1.45856 1.15856 1.36968 1.37040 1.16643 0.82560 0.81840 0.79895 1.90923 1.46645 1.37281 1.63557 1.21946 0.90878 0.94192 1.00543 1.22758 0.98036 0.97520 0.93951 1.19409 0.92881 0.97491 0.98526 1.19398 0.96546 0.97236 0.96366 1.25028 0.87667 1.04499 1.01100 1.86640 1.67134 1.27496 1.51863 0.94895 0.84030 0.80644 0.81169 1.20587 0.95704 0.95862 0.99226 1.20970 0.94923 1.03549 1.00204 1.17753 0.85833 0.91747 0.94193 1.86179 1.27642 1.49324 1.59218 1.23192 1.01888 0.87484 0.94492 1.18778 0.92726 0.95827 0.92854 1.84053 1.40416 1.39294 1.43762 1.23393 0.97037 0.95063 1.00970 0.91766 0.87804 0.91703 0.88846 0.88861 0.75320 0.80760 0.86332 0.77703 1.18329 1.17970 0.84243 0.83495 0.92156 0.92011 0.87630 0.89026 0.87717 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.48 10.57 -39.24 -0.41 -0.90 16 3 C 0.47 0.76 7.48 36.01 0.27 1.03 16 4 O -0.50 -2.20 15.65 -18.75 -0.29 -2.50 16 5 C -0.11 0.14 4.26 -90.96 -0.39 -0.25 16 6 H 0.13 -0.43 8.14 -51.93 -0.42 -0.85 16 7 C -0.13 0.19 7.43 -25.93 -0.19 -0.01 16 8 C 0.12 -0.12 4.24 -67.12 -0.28 -0.41 16 9 H 0.13 -0.08 7.46 -51.93 -0.39 -0.47 16 10 N -0.71 -0.12 5.35 -54.23 -0.29 -0.41 16 11 C 0.61 1.64 7.80 -12.72 -0.10 1.54 16 12 O -0.51 -2.68 16.43 5.23 0.09 -2.59 16 13 C -0.03 -0.07 7.07 -36.91 -0.26 -0.33 16 14 C -0.10 -0.28 10.68 -37.23 -0.40 -0.67 16 15 C -0.08 -0.20 6.16 -105.20 -0.65 -0.84 16 16 C -0.09 -0.05 5.26 -104.63 -0.55 -0.60 16 17 C -0.07 0.01 2.71 36.00 0.10 0.11 16 18 O -0.53 -0.70 12.88 -35.23 -0.45 -1.15 16 19 Si 0.69 -1.06 30.25 -169.99 -5.14 -6.20 16 20 C -0.10 0.08 8.62 -39.97 -0.34 -0.26 16 21 C -0.18 0.12 9.03 -39.37 -0.36 -0.23 16 22 C 0.15 0.25 6.70 -39.12 -0.26 -0.02 16 23 O -0.31 -0.45 10.50 -19.63 -0.21 -0.66 16 24 C 0.02 -0.06 9.81 101.05 0.99 0.93 16 25 C 0.05 0.14 7.35 -38.24 -0.28 -0.14 16 26 O -0.17 -0.56 10.28 2.67 0.03 -0.53 16 27 C -0.13 0.19 7.15 -25.92 -0.19 0.00 16 28 H 0.06 -0.03 8.13 -51.93 -0.42 -0.46 16 29 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 30 H 0.06 -0.03 8.13 -51.93 -0.42 -0.46 16 31 H 0.09 -0.09 8.09 -51.93 -0.42 -0.51 16 32 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 33 H 0.41 -0.40 8.44 -40.82 -0.34 -0.75 16 34 H 0.17 0.35 8.06 -52.49 -0.42 -0.07 16 35 H 0.12 -0.07 7.96 -51.93 -0.41 -0.48 16 36 H 0.38 -0.61 8.70 45.56 0.40 -0.21 16 37 H -0.26 0.08 6.69 56.52 0.38 0.46 16 38 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 39 H 0.14 -0.38 4.81 -52.49 -0.25 -0.64 16 40 H 0.15 -0.50 6.26 -52.49 -0.33 -0.83 16 41 H 0.06 -0.23 7.66 -51.93 -0.40 -0.62 16 42 H 0.06 -0.24 7.66 -51.93 -0.40 -0.64 16 43 H 0.11 -0.41 8.14 -51.93 -0.42 -0.83 16 44 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 45 H 0.10 -0.06 7.42 -51.93 -0.39 -0.44 16 LS Contribution 387.50 15.07 5.84 5.84 Total: 0.00 -9.84 387.50 -8.21 -18.05 By element: Atomic # 1 Polarization: -4.30 SS G_CDS: -5.53 Total: -9.84 kcal Atomic # 6 Polarization: 2.71 SS G_CDS: -1.82 Total: 0.89 kcal Atomic # 7 Polarization: -0.12 SS G_CDS: -0.29 Total: -0.41 kcal Atomic # 8 Polarization: -7.08 SS G_CDS: -1.25 Total: -8.33 kcal Atomic # 14 Polarization: -1.06 SS G_CDS: -5.14 Total: -6.20 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -9.84 -8.21 -18.05 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_6672420.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -97.856 kcal (2) G-P(sol) polarization free energy of solvation -9.840 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.696 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.206 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.045 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.902 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds