Wall clock time and date at job start Sat Mar 6 2021 15:37:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34234 * 116.99919 * 2 1 4 4 O 1.20821 * 119.99564 * 0.02562 * 3 2 1 5 5 C 1.50690 * 120.00013 * 179.97438 * 3 2 1 6 6 H 1.09000 * 112.90879 * 48.75425 * 5 3 2 7 7 C 1.53786 * 113.61518 * 180.02562 * 5 3 2 8 8 C 1.53781 * 87.17350 * 140.02616 * 7 5 3 9 9 H 1.08999 * 113.61567 * 89.07405 * 8 7 5 10 10 N 1.46500 * 113.61760 * 219.89426 * 8 7 5 11 11 C 1.34768 * 120.00289 * 205.00346 * 10 8 7 12 12 O 1.21698 * 119.99962 * 359.97438 * 11 10 8 13 13 C 1.46579 * 120.00125 * 179.97438 * 11 10 8 14 14 C 1.36647 * 125.45919 * 179.97438 * 13 11 10 15 15 C 1.37483 * 113.29785 * 180.02562 * 14 13 11 16 16 C 1.50693 * 122.44922 * 180.02562 * 15 14 13 17 17 C 1.33811 * 115.09637 * 0.02562 * 15 14 13 18 18 C 1.50703 * 124.52003 * 179.97438 * 17 15 14 19 19 O 1.42900 * 109.47249 * 29.99656 * 18 17 15 20 20 Si 1.86298 * 109.47545 * 149.99702 * 18 17 15 21 21 S 1.70620 * 110.95873 * 359.72318 * 17 15 14 22 22 C 1.53781 * 87.08070 * 334.52830 * 8 7 5 23 23 H 1.09002 * 109.46788 * 179.97438 * 1 2 3 24 24 H 1.08998 * 109.47143 * 299.99863 * 1 2 3 25 25 H 1.09005 * 109.46883 * 60.00147 * 1 2 3 26 26 H 1.09002 * 113.61357 * 25.43533 * 7 5 3 27 27 H 1.09002 * 113.61608 * 254.61695 * 7 5 3 28 28 H 0.97000 * 119.99380 * 24.99478 * 10 8 7 29 29 H 1.07996 * 123.35575 * 0.02562 * 14 13 11 30 30 H 1.08997 * 109.47303 * 89.97154 * 16 15 14 31 31 H 1.09001 * 109.47212 * 209.97794 * 16 15 14 32 32 H 1.09006 * 109.47386 * 329.97144 * 16 15 14 33 33 H 1.08998 * 109.47318 * 269.99934 * 18 17 15 34 34 H 0.96707 * 114.00141 * 59.99704 * 19 18 17 35 35 H 1.48503 * 109.99839 * 58.67836 * 20 18 17 36 36 H 1.48492 * 110.00432 * 180.02562 * 20 18 17 37 37 H 1.09005 * 113.61471 * 139.98321 * 22 8 7 38 38 H 1.08996 * 113.61178 * 270.79663 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0249 0.6360 -0.7540 7 6 4.1077 2.7143 0.0011 8 6 5.1823 2.2287 0.9882 9 1 6.0819 1.8503 0.5028 10 7 5.4731 3.1869 2.0575 11 6 6.6719 3.1667 2.6729 12 8 7.5127 2.3521 2.3407 13 6 6.9630 4.1258 3.7424 14 6 8.1358 4.2044 4.4392 15 6 8.1383 5.1980 5.3894 16 6 9.3274 5.4666 6.2753 17 6 7.0076 5.9091 5.4699 18 6 6.7797 7.0445 6.4344 19 8 8.0238 7.6900 6.7128 20 14 5.5983 8.2720 5.6806 21 16 5.8610 5.3634 4.3304 22 6 4.1936 1.1250 1.3995 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3633 0.5138 0.8900 25 1 -0.3633 0.5138 -0.8900 26 1 3.4171 3.4404 0.4300 27 1 4.5098 3.0300 -0.9616 28 1 4.8028 3.8361 2.3224 29 1 8.9772 3.5511 4.2612 30 1 9.9817 6.1938 5.7946 31 1 8.9858 5.8616 7.2320 32 1 9.8747 4.5384 6.4402 33 1 6.3571 6.6551 7.3606 34 1 8.4576 8.0613 5.9324 35 1 4.3113 7.6054 5.3570 36 1 5.3656 9.3969 6.6216 37 1 4.6650 0.1562 1.5653 38 1 3.5275 1.4161 2.2117 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10970304_6739946.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:37:14 Heat of formation + Delta-G solvation = -90.991396 kcal Electronic energy + Delta-G solvation = -23032.596237 eV Core-core repulsion = 19355.557464 eV Total energy + Delta-G solvation = -3677.038773 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 312.091 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -42.02302 -41.02332 -39.99771 -39.08983 -37.47446 -37.25583 -34.74992 -32.12046 -30.21020 -29.44936 -27.49002 -26.85859 -25.95476 -24.47948 -22.55817 -21.85311 -20.84704 -20.10747 -19.32942 -19.00692 -18.08689 -17.55840 -17.43550 -17.32712 -16.65710 -16.47663 -16.26416 -15.96274 -15.71622 -15.25243 -14.63615 -14.51371 -14.43597 -14.30941 -13.95867 -13.68568 -13.56616 -13.47130 -13.11336 -13.05054 -12.94238 -12.57027 -12.44531 -12.38488 -12.22118 -11.87161 -11.84216 -11.76893 -11.45767 -11.24971 -10.67579 -10.28996 -9.69480 -9.43805 -5.08041 -0.68579 0.25993 0.68690 1.03362 1.10287 1.31483 1.53296 1.61532 1.88392 2.02890 2.05666 3.20850 3.27718 3.36385 3.57672 3.61967 3.69833 3.74033 4.00754 4.09763 4.24281 4.26043 4.26940 4.44300 4.46568 4.53361 4.59319 4.60130 4.66959 4.78655 4.83192 4.89923 4.91965 5.00539 5.02859 5.30536 5.37836 5.39834 5.48972 6.26979 6.62689 6.66640 6.95365 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.363 6.363 3 C 0.471 3.529 4 O -0.536 6.536 5 C -0.104 4.104 6 H 0.155 0.845 7 C -0.120 4.120 8 C 0.124 3.876 9 H 0.124 0.876 10 N -0.707 5.707 11 C 0.594 3.406 12 O -0.564 6.564 13 C -0.283 4.283 14 C -0.053 4.053 15 C -0.099 4.099 16 C -0.092 4.092 17 C -0.234 4.234 18 C -0.029 4.029 19 O -0.539 6.539 20 Si 0.728 3.272 21 S 0.226 5.774 22 C -0.131 4.131 23 H 0.127 0.873 24 H 0.060 0.940 25 H 0.062 0.938 26 H 0.097 0.903 27 H 0.104 0.896 28 H 0.409 0.591 29 H 0.149 0.851 30 H 0.085 0.915 31 H 0.079 0.921 32 H 0.060 0.940 33 H 0.122 0.878 34 H 0.396 0.604 35 H -0.257 1.257 36 H -0.273 1.273 37 H 0.095 0.905 38 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.900 1.671 -1.368 2.340 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.279 6.279 3 C 0.316 3.684 4 O -0.426 6.426 5 C -0.123 4.123 6 H 0.172 0.828 7 C -0.158 4.158 8 C 0.020 3.980 9 H 0.141 0.859 10 N -0.357 5.357 11 C 0.381 3.619 12 O -0.445 6.445 13 C -0.403 4.403 14 C -0.087 4.087 15 C -0.111 4.111 16 C -0.151 4.151 17 C -0.353 4.353 18 C -0.142 4.142 19 O -0.347 6.347 20 Si 0.630 3.370 21 S 0.495 5.505 22 C -0.170 4.170 23 H 0.145 0.855 24 H 0.079 0.921 25 H 0.081 0.919 26 H 0.115 0.885 27 H 0.122 0.878 28 H 0.245 0.755 29 H 0.167 0.833 30 H 0.104 0.896 31 H 0.098 0.902 32 H 0.079 0.921 33 H 0.139 0.861 34 H 0.247 0.753 35 H -0.183 1.183 36 H -0.199 1.199 37 H 0.114 0.886 38 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -2.978 2.049 -1.333 3.853 hybrid contribution 0.852 -0.730 0.895 1.435 sum -2.126 1.319 -0.439 2.540 Atomic orbital electron populations 1.23526 0.75045 1.05576 1.02467 1.86525 1.24754 1.33192 1.83462 1.23963 0.92476 0.81020 0.70978 1.90665 1.67855 1.37346 1.46711 1.22462 0.85981 1.01614 1.02264 0.82759 1.23346 0.96362 0.94742 1.01305 1.22527 0.98080 0.89532 0.87899 0.85850 1.45774 1.15314 1.37063 1.37572 1.17156 0.82021 0.82193 0.80524 1.90828 1.47782 1.40060 1.65802 1.24555 1.01570 1.06946 1.07242 1.20829 0.97013 0.97460 0.93352 1.18791 0.97655 0.95593 0.99078 1.20632 0.93621 1.02169 0.98638 1.24667 0.99666 1.05765 1.05224 1.24558 0.94858 0.95063 0.99692 1.86509 1.34693 1.74917 1.38539 0.93988 0.77673 0.78949 0.86371 1.82925 1.15173 1.24994 1.27402 1.23483 0.97602 1.01262 0.94623 0.85472 0.92071 0.91920 0.88472 0.87779 0.75463 0.83288 0.89627 0.90208 0.92058 0.86067 0.75346 1.18266 1.19858 0.88604 0.89384 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.16 16 2 O -0.36 -0.85 10.57 -51.45 -0.54 -1.39 16 3 C 0.47 1.36 7.49 71.23 0.53 1.89 16 4 O -0.54 -4.61 15.65 21.98 0.34 -4.27 16 5 C -0.10 0.34 4.27 -10.92 -0.05 0.30 16 6 H 0.15 -1.18 8.14 -2.39 -0.02 -1.20 16 7 C -0.12 0.47 7.15 31.12 0.22 0.69 16 8 C 0.12 -0.25 4.24 45.52 0.19 -0.06 16 9 H 0.12 -0.07 7.46 -2.39 -0.02 -0.09 16 10 N -0.71 0.15 5.35 -444.11 -2.38 -2.23 16 11 C 0.59 3.30 7.78 86.42 0.67 3.98 16 12 O -0.56 -7.19 16.44 -4.34 -0.07 -7.27 16 13 C -0.28 -0.85 6.45 24.07 0.16 -0.69 16 14 C -0.05 -0.16 9.80 21.72 0.21 0.05 16 15 C -0.10 -0.03 5.75 -21.05 -0.12 -0.15 16 16 C -0.09 0.19 8.68 71.23 0.62 0.80 16 17 C -0.23 0.35 5.54 24.68 0.14 0.49 16 18 C -0.03 0.10 2.76 71.24 0.20 0.30 16 19 O -0.54 2.07 9.85 -148.98 -1.47 0.60 16 20 Si 0.73 -3.17 31.31 68.60 2.15 -1.02 16 21 S 0.23 -0.42 19.78 -56.49 -1.12 -1.54 16 22 C -0.13 0.37 7.44 31.21 0.23 0.60 16 23 H 0.13 -0.85 8.14 -2.39 -0.02 -0.87 16 24 H 0.06 -0.06 8.13 -2.39 -0.02 -0.08 16 25 H 0.06 -0.06 8.13 -2.38 -0.02 -0.08 16 26 H 0.10 -0.21 7.41 -2.39 -0.02 -0.23 16 27 H 0.10 -0.65 8.14 -2.39 -0.02 -0.67 16 28 H 0.41 -1.58 7.84 -92.71 -0.73 -2.30 16 29 H 0.15 0.56 8.06 -2.91 -0.02 0.53 16 30 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 31 H 0.08 -0.05 6.41 -2.39 -0.02 -0.07 16 32 H 0.06 -0.10 8.13 -2.38 -0.02 -0.12 16 33 H 0.12 -0.33 7.96 -2.39 -0.02 -0.35 16 34 H 0.40 -4.31 8.66 -74.05 -0.64 -4.95 16 35 H -0.26 0.27 7.09 99.48 0.71 0.97 16 36 H -0.27 -0.62 7.11 99.48 0.71 0.09 16 37 H 0.10 -0.32 8.14 -2.38 -0.02 -0.34 16 38 H 0.09 -0.16 8.10 -2.39 -0.02 -0.18 16 Total: 0.00 -19.02 338.06 0.89 -18.12 By element: Atomic # 1 Polarization: -10.13 SS G_CDS: -0.22 Total: -10.36 kcal Atomic # 6 Polarization: 5.15 SS G_CDS: 4.20 Total: 9.35 kcal Atomic # 7 Polarization: 0.15 SS G_CDS: -2.38 Total: -2.23 kcal Atomic # 8 Polarization: -10.58 SS G_CDS: -1.74 Total: -12.32 kcal Atomic # 14 Polarization: -3.17 SS G_CDS: 2.15 Total: -1.02 kcal Atomic # 16 Polarization: -0.42 SS G_CDS: -1.12 Total: -1.54 kcal Total: -19.02 0.89 -18.12 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_6739946.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.869 kcal (2) G-P(sol) polarization free energy of solvation -19.016 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.885 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.893 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.123 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.991 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds