Wall clock time and date at job start Sat Mar 6 2021 15:37:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34222 * 117.00065 * 2 1 4 4 O 1.20826 * 119.99866 * 0.02562 * 3 2 1 5 5 C 1.50704 * 120.00267 * 179.97438 * 3 2 1 6 6 H 1.09000 * 112.84814 * 311.19538 * 5 3 2 7 7 C 1.53778 * 113.61136 * 82.49955 * 5 3 2 8 8 C 1.53788 * 87.08087 * 139.98460 * 7 5 3 9 9 H 1.09000 * 113.69058 * 89.12467 * 8 7 5 10 10 N 1.46502 * 113.61531 * 220.02311 * 8 7 5 11 11 C 1.34782 * 119.99286 * 252.49366 * 10 8 7 12 12 O 1.21632 * 120.00375 * 359.97438 * 11 10 8 13 13 C 1.47194 * 119.99380 * 179.97438 * 11 10 8 14 14 C 1.36010 * 123.46255 * 359.97438 * 13 11 10 15 15 S 1.70444 * 110.81590 * 180.02562 * 14 13 11 16 16 C 1.75504 * 92.44403 * 359.97438 * 15 14 13 17 17 C 1.50707 * 124.70921 * 180.02562 * 16 15 14 18 18 O 1.42903 * 109.46442 * 245.02425 * 17 16 15 19 19 Si 1.86293 * 109.47256 * 5.01992 * 17 16 15 20 20 C 1.32764 * 110.58141 * 0.26612 * 16 15 14 21 21 C 1.53780 * 113.61302 * 179.97438 * 5 3 2 22 22 H 1.08998 * 109.47136 * 299.99922 * 1 2 3 23 23 H 1.08993 * 109.47232 * 60.00157 * 1 2 3 24 24 H 1.08996 * 109.47090 * 180.02562 * 1 2 3 25 25 H 1.08998 * 113.61957 * 25.43862 * 7 5 3 26 26 H 1.09001 * 113.61904 * 254.52970 * 7 5 3 27 27 H 0.96996 * 119.99971 * 72.49168 * 10 8 7 28 28 H 1.07998 * 124.59164 * 359.97438 * 14 13 11 29 29 H 1.08999 * 109.47345 * 125.02495 * 17 16 15 30 30 H 0.96700 * 114.00311 * 60.00230 * 18 17 16 31 31 H 1.48501 * 109.99918 * 58.68485 * 19 17 16 32 32 H 1.48506 * 109.99973 * 180.02562 * 19 17 16 33 33 H 1.08002 * 123.46400 * 179.73481 * 20 16 15 34 34 H 1.08998 * 113.61283 * 105.47392 * 21 5 3 35 35 H 1.08993 * 113.61962 * 334.56224 * 21 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2092 0.0005 5 6 3.5664 1.2748 0.0006 6 1 4.0234 0.6365 0.7567 7 6 4.1916 1.1231 -1.3961 8 6 5.1815 2.2266 -0.9866 9 1 6.0817 1.8493 -0.5013 10 7 5.4709 3.1826 -2.0583 11 6 6.6692 3.1611 -2.6749 12 8 7.5104 2.3483 -2.3414 13 6 6.9598 4.1213 -3.7520 14 6 6.0722 5.0583 -4.1810 15 16 6.7409 5.9955 -5.4379 16 6 8.2562 5.1113 -5.3925 17 6 9.4382 5.3878 -6.2856 18 8 9.6636 4.2637 -7.1388 19 14 9.0930 6.8958 -7.3236 20 6 8.2149 4.1617 -4.4655 21 6 4.1077 2.7142 -0.0001 22 1 -0.3633 0.5138 0.8900 23 1 -0.3633 0.5138 -0.8899 24 1 -0.3633 -1.0276 0.0005 25 1 3.5243 1.4143 -2.2073 26 1 4.6621 0.1538 -1.5610 27 1 4.8002 3.8310 -2.3240 28 1 5.0781 5.1901 -3.7802 29 1 10.3231 5.5627 -5.6737 30 1 8.9157 4.0497 -7.7132 31 1 8.8254 8.0648 -6.4477 32 1 10.2509 7.1787 -8.2093 33 1 9.0364 3.4902 -4.2639 34 1 4.5104 3.0297 0.9624 35 1 3.4175 3.4401 -0.4298 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_6894386.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:37:17 Heat of formation + Delta-G solvation = -89.621451 kcal Electronic energy + Delta-G solvation = -21038.860989 eV Core-core repulsion = 17517.419240 eV Total energy + Delta-G solvation = -3521.441749 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 298.075 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -41.99908 -40.96507 -39.48737 -38.61318 -37.35523 -37.06157 -34.64857 -31.78589 -29.42951 -27.28773 -26.97113 -26.95995 -25.36083 -22.66752 -21.90859 -21.05725 -20.28103 -19.16091 -18.76356 -18.14821 -17.91031 -17.57452 -17.39113 -16.53874 -16.35189 -16.27828 -15.82062 -15.58040 -15.17151 -14.57685 -14.46363 -14.24354 -14.13744 -13.82334 -13.72386 -13.67762 -13.41747 -13.06185 -12.72470 -12.58594 -12.39022 -12.27338 -11.94192 -11.90119 -11.81653 -11.39451 -10.92151 -10.62472 -10.19589 -10.04347 -9.53475 -5.23873 -0.40027 0.30326 0.65331 0.87560 1.11877 1.15378 1.53224 1.60824 1.84286 2.13509 2.30553 3.13078 3.21135 3.30422 3.52767 3.56431 3.64389 3.79778 3.87917 3.97528 4.13401 4.20817 4.23845 4.37128 4.40217 4.44339 4.50329 4.56699 4.67520 4.69054 4.76966 4.95465 5.04033 5.18261 5.34076 5.40708 6.38829 6.44242 6.69499 7.15610 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.472 3.528 4 O -0.506 6.506 5 C -0.109 4.109 6 H 0.133 0.867 7 C -0.134 4.134 8 C 0.127 3.873 9 H 0.126 0.874 10 N -0.716 5.716 11 C 0.581 3.419 12 O -0.530 6.530 13 C -0.157 4.157 14 C -0.205 4.205 15 S 0.197 5.803 16 C -0.244 4.244 17 C -0.026 4.026 18 O -0.533 6.533 19 Si 0.655 3.345 20 C -0.053 4.053 21 C -0.127 4.127 22 H 0.064 0.936 23 H 0.064 0.936 24 H 0.104 0.896 25 H 0.091 0.909 26 H 0.091 0.909 27 H 0.401 0.599 28 H 0.171 0.829 29 H 0.125 0.875 30 H 0.381 0.619 31 H -0.237 1.237 32 H -0.232 1.232 33 H 0.157 0.843 34 H 0.089 0.911 35 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.087 1.040 -1.926 4.636 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.272 6.272 3 C 0.315 3.685 4 O -0.393 6.393 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.173 4.173 8 C 0.022 3.978 9 H 0.144 0.856 10 N -0.367 5.367 11 C 0.367 3.633 12 O -0.407 6.407 13 C -0.175 4.175 14 C -0.343 4.343 15 S 0.464 5.536 16 C -0.361 4.361 17 C -0.139 4.139 18 O -0.339 6.339 19 Si 0.555 3.445 20 C -0.082 4.082 21 C -0.165 4.165 22 H 0.083 0.917 23 H 0.082 0.918 24 H 0.122 0.878 25 H 0.110 0.890 26 H 0.110 0.890 27 H 0.236 0.764 28 H 0.189 0.811 29 H 0.142 0.858 30 H 0.228 0.772 31 H -0.161 1.161 32 H -0.155 1.155 33 H 0.174 0.826 34 H 0.108 0.892 35 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -3.412 2.788 -2.473 5.053 hybrid contribution -0.140 -1.162 1.435 1.852 sum -3.552 1.626 -1.037 4.042 Atomic orbital electron populations 1.23328 0.75897 1.04064 1.02695 1.86522 1.23747 1.33244 1.83728 1.23472 0.91569 0.81434 0.72021 1.90681 1.66995 1.36450 1.45183 1.22312 0.87712 1.00981 1.01861 0.84956 1.23461 0.97938 1.01298 0.94570 1.22453 0.97908 0.89500 0.87973 0.85582 1.45781 1.16196 1.37119 1.37627 1.17650 0.81685 0.82952 0.81049 1.90825 1.46364 1.38775 1.64695 1.20242 0.95548 1.00129 1.01623 1.25803 1.04333 1.00800 1.03384 1.83057 1.05215 1.33563 1.31798 1.24800 1.01007 1.04104 1.06167 1.24449 0.95861 0.99047 0.94542 1.86547 1.43528 1.49169 1.54637 0.95134 0.89258 0.76704 0.83435 1.21052 0.96768 0.97434 0.92908 1.23382 0.97118 0.94961 1.01039 0.91713 0.91771 0.87801 0.89017 0.89034 0.76356 0.81124 0.85833 0.77162 1.16139 1.15545 0.82592 0.89188 0.87923 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.40 10.56 -39.24 -0.41 -0.81 16 3 C 0.47 0.61 7.48 36.01 0.27 0.87 16 4 O -0.51 -1.97 15.65 -18.75 -0.29 -2.26 16 5 C -0.11 0.16 4.26 -90.96 -0.39 -0.23 16 6 H 0.13 -0.42 8.14 -51.93 -0.42 -0.84 16 7 C -0.13 0.21 7.43 -25.92 -0.19 0.02 16 8 C 0.13 -0.15 4.24 -67.13 -0.28 -0.43 16 9 H 0.13 -0.02 7.46 -51.93 -0.39 -0.41 16 10 N -0.72 0.60 5.32 -54.17 -0.29 0.31 16 11 C 0.58 1.27 7.79 -12.62 -0.10 1.17 16 12 O -0.53 -3.16 16.39 5.25 0.09 -3.08 16 13 C -0.16 -0.13 5.98 -104.62 -0.63 -0.76 16 14 C -0.21 0.35 10.38 29.93 0.31 0.66 16 15 S 0.20 -0.40 20.20 -107.50 -2.17 -2.57 16 16 C -0.24 0.07 5.65 -36.18 -0.20 -0.13 16 17 C -0.03 0.02 2.94 36.01 0.11 0.12 16 18 O -0.53 0.05 12.88 -35.23 -0.45 -0.41 16 19 Si 0.66 -1.11 30.92 -169.99 -5.26 -6.37 16 20 C -0.05 -0.07 9.95 -39.02 -0.39 -0.46 16 21 C -0.13 0.24 7.15 -25.93 -0.19 0.05 16 22 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 23 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 24 H 0.10 -0.32 8.14 -51.93 -0.42 -0.75 16 25 H 0.09 -0.13 8.09 -51.93 -0.42 -0.55 16 26 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 27 H 0.40 -1.29 7.22 -40.82 -0.29 -1.58 16 28 H 0.17 -0.77 7.01 -52.49 -0.37 -1.14 16 29 H 0.12 -0.05 7.96 -51.93 -0.41 -0.46 16 30 H 0.38 -1.53 8.70 45.56 0.40 -1.13 16 31 H -0.24 -0.06 7.11 56.52 0.40 0.34 16 32 H -0.23 -0.27 7.11 56.52 0.40 0.13 16 33 H 0.16 0.37 8.06 -52.49 -0.42 -0.05 16 34 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 35 H 0.10 -0.14 7.41 -51.93 -0.38 -0.52 16 LS Contribution 320.72 15.07 4.83 4.83 Total: 0.00 -8.95 320.72 -8.60 -17.55 By element: Atomic # 1 Polarization: -5.10 SS G_CDS: -4.03 Total: -9.13 kcal Atomic # 6 Polarization: 2.54 SS G_CDS: -0.61 Total: 1.93 kcal Atomic # 7 Polarization: 0.60 SS G_CDS: -0.29 Total: 0.31 kcal Atomic # 8 Polarization: -5.48 SS G_CDS: -1.08 Total: -6.56 kcal Atomic # 14 Polarization: -1.11 SS G_CDS: -5.26 Total: -6.37 kcal Atomic # 16 Polarization: -0.40 SS G_CDS: -2.17 Total: -2.57 kcal Total LS contribution 4.83 Total: 4.83 kcal Total: -8.95 -8.60 -17.55 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_6894386.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.069 kcal (2) G-P(sol) polarization free energy of solvation -8.951 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.020 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.601 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.552 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.621 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds