Wall clock time and date at job start Sat Mar 6 2021 15:37:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34228 * 116.99884 * 2 1 4 4 O 1.20825 * 119.99699 * 359.97438 * 3 2 1 5 5 C 1.50703 * 119.99777 * 179.97438 * 3 2 1 6 6 H 1.08996 * 112.85266 * 311.19270 * 5 3 2 7 7 C 1.53776 * 113.69127 * 82.46574 * 5 3 2 8 8 C 1.53780 * 87.08451 * 139.98772 * 7 5 3 9 9 H 1.09004 * 113.68916 * 89.12436 * 8 7 5 10 10 N 1.46494 * 113.61649 * 220.01778 * 8 7 5 11 11 C 1.34777 * 120.00049 * 252.49320 * 10 8 7 12 12 O 1.21281 * 120.00149 * 0.02562 * 11 10 8 13 13 C 1.50702 * 119.99859 * 179.97438 * 11 10 8 14 14 N 1.46501 * 109.46912 * 180.02562 * 13 11 10 15 15 C 1.36833 * 125.06099 * 264.97953 * 14 13 11 16 16 C 1.34241 * 109.93938 * 180.02562 * 15 14 13 17 17 C 1.50699 * 126.50213 * 179.97438 * 16 15 14 18 18 O 1.42905 * 109.46972 * 255.02545 * 17 16 15 19 19 Si 1.86295 * 109.47097 * 15.02184 * 17 16 15 20 20 C 1.46488 * 106.99527 * 0.24015 * 16 15 14 21 21 C 1.39595 * 134.03517 * 180.47468 * 20 16 15 22 22 C 1.36663 * 119.76416 * 179.63886 * 21 20 16 23 23 C 1.38786 * 120.52944 * 359.67930 * 22 21 20 24 24 C 1.37781 * 120.66525 * 0.02562 * 23 22 21 25 25 C 1.37687 * 125.06521 * 84.97529 * 14 13 11 26 26 C 1.53780 * 113.60968 * 179.97438 * 5 3 2 27 27 H 1.09000 * 109.47407 * 299.99978 * 1 2 3 28 28 H 1.08998 * 109.46887 * 60.00543 * 1 2 3 29 29 H 1.08998 * 109.47200 * 179.97438 * 1 2 3 30 30 H 1.09006 * 113.61693 * 25.43778 * 7 5 3 31 31 H 1.08995 * 113.61459 * 254.54254 * 7 5 3 32 32 H 0.97004 * 119.99979 * 72.50162 * 10 8 7 33 33 H 1.08997 * 109.47071 * 60.00722 * 13 11 10 34 34 H 1.08994 * 109.47211 * 300.00264 * 13 11 10 35 35 H 1.08004 * 125.03533 * 359.97438 * 15 14 13 36 36 H 1.09000 * 109.47247 * 135.02480 * 17 16 15 37 37 H 0.96696 * 114.00036 * 179.97438 * 18 17 16 38 38 H 1.48496 * 110.00262 * 300.00047 * 19 17 16 39 39 H 1.48497 * 109.99780 * 61.32038 * 19 17 16 40 40 H 1.08004 * 120.11946 * 359.34406 * 21 20 16 41 41 H 1.08006 * 119.73104 * 179.70087 * 22 21 20 42 42 H 1.08005 * 119.66246 * 179.97438 * 23 22 21 43 43 H 1.08002 * 120.11072 * 180.02562 * 24 23 22 44 44 H 1.08997 * 113.61502 * 105.38821 * 26 5 3 45 45 H 1.09001 * 113.61813 * 334.48455 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 1 4.0234 0.6366 0.7567 7 6 4.1936 1.1225 -1.3951 8 6 5.1828 2.2261 -0.9849 9 1 6.0823 1.8492 -0.4981 10 7 5.4737 3.1815 -2.0566 11 6 6.6728 3.1598 -2.6716 12 8 7.5108 2.3491 -2.3380 13 6 6.9718 4.1423 -3.7745 14 7 8.3292 3.9147 -4.2764 15 6 9.4449 4.5878 -3.8586 16 6 10.5244 4.1382 -4.5178 17 6 11.9425 4.6194 -4.3492 18 8 12.3034 5.4382 -5.4634 19 14 12.0787 5.6126 -2.7789 20 6 10.0615 3.0957 -5.4369 21 6 10.6969 2.2662 -6.3626 22 6 9.9631 1.3651 -7.0818 23 6 8.5917 1.2631 -6.8946 24 6 7.9454 2.0677 -5.9818 25 6 8.6724 2.9917 -5.2387 26 6 4.1077 2.7142 -0.0001 27 1 -0.3634 0.5138 0.8900 28 1 -0.3633 0.5137 -0.8900 29 1 -0.3633 -1.0276 -0.0005 30 1 3.5273 1.4132 -2.2074 31 1 4.6642 0.1531 -1.5589 32 1 4.8033 3.8299 -2.3236 33 1 6.8928 5.1582 -3.3874 34 1 6.2571 4.0061 -4.5861 35 1 9.4554 5.3662 -3.1099 36 1 12.6133 3.7619 -4.2960 37 1 13.2054 5.7841 -5.4215 38 1 11.1690 6.7847 -2.8388 39 1 11.7367 4.7634 -1.6097 40 1 11.7638 2.3397 -6.5134 41 1 10.4546 0.7269 -7.8014 42 1 8.0255 0.5463 -7.4708 43 1 6.8779 1.9804 -5.8430 44 1 4.5090 3.0302 0.9627 45 1 3.4180 3.4400 -0.4311 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_9818708.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:37:28 Heat of formation + Delta-G solvation = -47.049311 kcal Electronic energy + Delta-G solvation = -29532.170054 eV Core-core repulsion = 25290.468696 eV Total energy + Delta-G solvation = -4241.701358 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.145 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -42.51999 -42.01504 -40.82310 -39.28382 -37.94796 -37.52121 -37.36817 -34.81955 -34.06658 -31.41871 -30.19164 -29.67410 -28.93147 -27.05491 -26.95152 -25.53845 -23.72098 -22.99562 -22.27591 -21.78876 -20.83583 -20.43466 -19.07787 -18.58825 -18.21647 -18.20089 -17.86656 -17.63238 -17.46386 -16.67816 -16.40092 -16.32113 -16.23606 -15.60875 -15.40963 -14.93925 -14.79878 -14.69612 -14.57016 -14.46278 -14.28227 -14.02876 -13.87219 -13.75868 -13.48677 -13.36459 -13.10907 -12.72037 -12.64454 -12.51450 -12.43489 -12.33772 -11.99603 -11.89831 -11.86411 -11.65258 -11.46651 -11.13690 -10.44064 -10.32142 -10.10874 -9.03682 -8.54759 -4.95818 0.26255 0.78349 1.05320 1.31018 1.36268 1.37501 1.58837 1.63264 1.75744 2.04312 2.12317 3.03921 3.08827 3.12056 3.37459 3.42868 3.49771 3.56109 3.66115 3.75148 3.79662 3.83437 3.87542 4.09326 4.09604 4.16780 4.27862 4.31428 4.34720 4.36044 4.41320 4.46337 4.52498 4.59802 4.68005 4.69797 4.77337 4.85865 4.89403 4.98068 5.22301 5.24594 5.30801 5.63478 5.78947 5.84441 5.88210 6.09453 6.26817 6.35145 6.63826 6.80400 6.92595 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.133 4.133 8 C 0.126 3.874 9 H 0.124 0.876 10 N -0.718 5.718 11 C 0.493 3.507 12 O -0.512 6.512 13 C 0.091 3.909 14 N -0.466 5.466 15 C 0.064 3.936 16 C -0.150 4.150 17 C -0.033 4.033 18 O -0.547 6.547 19 Si 0.681 3.319 20 C -0.085 4.085 21 C -0.063 4.063 22 C -0.145 4.145 23 C -0.096 4.096 24 C -0.127 4.127 25 C 0.109 3.891 26 C -0.126 4.126 27 H 0.065 0.935 28 H 0.064 0.936 29 H 0.104 0.896 30 H 0.092 0.908 31 H 0.090 0.910 32 H 0.405 0.595 33 H 0.122 0.878 34 H 0.120 0.880 35 H 0.162 0.838 36 H 0.070 0.930 37 H 0.378 0.622 38 H -0.254 1.254 39 H -0.256 1.256 40 H 0.123 0.877 41 H 0.124 0.876 42 H 0.126 0.874 43 H 0.115 0.885 44 H 0.089 0.911 45 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.725 0.942 0.947 1.520 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.272 6.272 3 C 0.315 3.685 4 O -0.392 6.392 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.172 4.172 8 C 0.021 3.979 9 H 0.142 0.858 10 N -0.370 5.370 11 C 0.277 3.723 12 O -0.385 6.385 13 C -0.036 4.036 14 N -0.149 5.149 15 C -0.061 4.061 16 C -0.157 4.157 17 C -0.144 4.144 18 O -0.353 6.353 19 Si 0.583 3.417 20 C -0.089 4.089 21 C -0.082 4.082 22 C -0.164 4.164 23 C -0.115 4.115 24 C -0.148 4.148 25 C 0.005 3.995 26 C -0.164 4.164 27 H 0.083 0.917 28 H 0.082 0.918 29 H 0.122 0.878 30 H 0.110 0.890 31 H 0.109 0.891 32 H 0.240 0.760 33 H 0.140 0.860 34 H 0.138 0.862 35 H 0.179 0.821 36 H 0.088 0.912 37 H 0.225 0.775 38 H -0.179 1.179 39 H -0.180 1.180 40 H 0.141 0.859 41 H 0.142 0.858 42 H 0.144 0.856 43 H 0.133 0.867 44 H 0.108 0.892 45 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -1.669 0.886 1.846 2.642 hybrid contribution -1.151 -0.089 -0.215 1.175 sum -2.820 0.798 1.631 3.354 Atomic orbital electron populations 1.23337 0.75816 1.04110 1.02722 1.86522 1.23811 1.33199 1.83706 1.23438 0.91518 0.81466 0.72069 1.90684 1.66969 1.36442 1.45144 1.22298 0.87825 1.00934 1.01799 0.84992 1.23445 0.97867 1.01202 0.94695 1.22458 0.97874 0.89584 0.88029 0.85793 1.45905 1.16101 1.37322 1.37722 1.21068 0.82254 0.85438 0.83537 1.90812 1.46094 1.37987 1.63655 1.21609 0.84091 1.00357 0.97496 1.43165 1.05597 1.32522 1.33608 1.21415 0.84927 0.98669 1.01047 1.19541 0.92933 1.01281 1.01970 1.23942 0.92971 0.98181 0.99286 1.86540 1.35591 1.68493 1.44635 0.95342 0.90245 0.80365 0.75797 1.18926 0.91754 0.98790 0.99470 1.20286 0.99750 0.93932 0.94203 1.20674 0.94090 1.00264 1.01400 1.20829 0.94730 0.98483 0.97448 1.19949 0.98922 0.97242 0.98657 1.18166 0.94168 0.93929 0.93238 1.23376 0.97028 0.95030 1.00977 0.91670 0.91758 0.87760 0.88961 0.89110 0.76022 0.85961 0.86166 0.82071 0.91162 0.77510 1.17897 1.18013 0.85866 0.85792 0.85623 0.86680 0.89216 0.87793 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.37 10.57 -39.25 -0.41 -0.78 16 3 C 0.47 0.53 7.49 36.01 0.27 0.80 16 4 O -0.50 -1.88 15.65 -18.75 -0.29 -2.17 16 5 C -0.11 0.18 4.26 -90.96 -0.39 -0.20 16 6 H 0.13 -0.42 8.14 -51.93 -0.42 -0.84 16 7 C -0.13 0.25 7.43 -25.92 -0.19 0.06 16 8 C 0.13 -0.22 4.24 -67.14 -0.28 -0.50 16 9 H 0.12 -0.04 7.46 -51.93 -0.39 -0.43 16 10 N -0.72 1.61 5.35 -53.04 -0.28 1.33 16 11 C 0.49 0.32 7.90 -10.98 -0.09 0.24 16 12 O -0.51 -2.84 16.02 5.56 0.09 -2.75 16 13 C 0.09 -0.11 6.48 -5.19 -0.03 -0.14 16 14 N -0.47 -1.42 2.27 -115.71 -0.26 -1.68 16 15 C 0.06 0.24 9.89 -16.73 -0.17 0.07 16 16 C -0.15 -0.69 5.61 -102.71 -0.58 -1.27 16 17 C -0.03 -0.06 3.05 36.01 0.11 0.05 16 18 O -0.55 -0.91 12.86 -35.23 -0.45 -1.37 16 19 Si 0.68 -0.06 30.79 -169.99 -5.23 -5.29 16 20 C -0.09 -0.47 6.35 -105.14 -0.67 -1.14 16 21 C -0.06 -0.26 10.05 -39.64 -0.40 -0.66 16 22 C -0.15 -0.43 9.97 -39.95 -0.40 -0.83 16 23 C -0.10 -0.25 10.01 -39.55 -0.40 -0.65 16 24 C -0.13 -0.42 10.00 -39.43 -0.39 -0.81 16 25 C 0.11 0.51 6.80 -83.99 -0.57 -0.06 16 26 C -0.13 0.29 7.15 -25.94 -0.19 0.11 16 27 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 28 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 29 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 30 H 0.09 -0.17 8.10 -51.93 -0.42 -0.59 16 31 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 32 H 0.40 -2.02 8.73 -40.82 -0.36 -2.38 16 33 H 0.12 -0.50 8.12 -51.93 -0.42 -0.92 16 34 H 0.12 -0.42 8.14 -51.93 -0.42 -0.85 16 35 H 0.16 0.28 6.30 -52.48 -0.33 -0.05 16 36 H 0.07 0.05 7.96 -51.93 -0.41 -0.37 16 37 H 0.38 -1.37 8.74 45.56 0.40 -0.97 16 38 H -0.25 -0.54 7.04 56.52 0.40 -0.15 16 39 H -0.26 -0.77 7.11 56.52 0.40 -0.36 16 40 H 0.12 0.33 8.06 -52.48 -0.42 -0.10 16 41 H 0.12 0.09 8.06 -52.48 -0.42 -0.33 16 42 H 0.13 0.03 8.06 -52.48 -0.42 -0.39 16 43 H 0.12 0.14 8.06 -52.49 -0.42 -0.29 16 44 H 0.09 -0.25 8.14 -51.93 -0.42 -0.68 16 45 H 0.10 -0.19 7.41 -51.93 -0.38 -0.58 16 LS Contribution 386.92 15.07 5.83 5.83 Total: 0.00 -12.85 386.92 -10.48 -23.33 By element: Atomic # 1 Polarization: -6.38 SS G_CDS: -6.17 Total: -12.55 kcal Atomic # 6 Polarization: -0.60 SS G_CDS: -3.29 Total: -3.89 kcal Atomic # 7 Polarization: 0.19 SS G_CDS: -0.55 Total: -0.36 kcal Atomic # 8 Polarization: -6.00 SS G_CDS: -1.07 Total: -7.07 kcal Atomic # 14 Polarization: -0.06 SS G_CDS: -5.23 Total: -5.29 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -12.85 -10.48 -23.33 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_9818708.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.721 kcal (2) G-P(sol) polarization free energy of solvation -12.846 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.568 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.482 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.328 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.049 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds