Wall clock time and date at job start Sat Mar 6 2021 15:37:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34232 * 116.99330 * 2 1 4 4 O 1.20823 * 120.00389 * 0.02562 * 3 2 1 5 5 C 1.50699 * 119.99567 * 179.97438 * 3 2 1 6 6 H 1.09002 * 112.90791 * 311.25185 * 5 3 2 7 7 C 1.53779 * 113.61429 * 82.50513 * 5 3 2 8 8 C 1.53779 * 87.08402 * 139.98140 * 7 5 3 9 9 H 1.08998 * 113.69354 * 89.12517 * 8 7 5 10 10 N 1.46501 * 113.61719 * 220.02087 * 8 7 5 11 11 C 1.34772 * 120.00042 * 252.49461 * 10 8 7 12 12 O 1.21626 * 120.00251 * 0.02562 * 11 10 8 13 13 C 1.47265 * 120.00041 * 179.97438 * 11 10 8 14 14 C 1.36774 * 126.94415 * 179.71234 * 13 11 10 15 15 C 1.50700 * 125.79582 * 359.97438 * 14 13 11 16 16 N 1.34655 * 108.39841 * 179.83904 * 14 13 11 17 17 C 1.36446 * 110.29701 * 0.44264 * 16 14 13 18 18 C 1.50703 * 125.57317 * 179.70804 * 17 16 14 19 19 O 1.42899 * 109.46902 * 245.02691 * 18 17 16 20 20 Si 1.86300 * 109.46765 * 5.02561 * 18 17 16 21 21 C 1.34484 * 108.85866 * 359.72860 * 17 16 14 22 22 C 1.53784 * 113.61308 * 180.02562 * 5 3 2 23 23 H 1.09008 * 109.47278 * 179.97438 * 1 2 3 24 24 H 1.08995 * 109.47577 * 299.99697 * 1 2 3 25 25 H 1.08999 * 109.47611 * 59.99846 * 1 2 3 26 26 H 1.09006 * 113.61307 * 25.43343 * 7 5 3 27 27 H 1.08999 * 113.69146 * 254.53828 * 7 5 3 28 28 H 0.97005 * 120.00129 * 72.49260 * 10 8 7 29 29 H 1.08993 * 109.47611 * 90.00233 * 15 14 13 30 30 H 1.09005 * 109.46453 * 210.00216 * 15 14 13 31 31 H 1.09008 * 109.47423 * 329.99675 * 15 14 13 32 32 H 0.96996 * 124.85137 * 180.14709 * 16 14 13 33 33 H 1.08997 * 109.46904 * 125.02410 * 18 17 16 34 34 H 0.96697 * 114.00639 * 60.00000 * 19 18 17 35 35 H 1.48502 * 109.99868 * 180.02562 * 20 18 17 36 36 H 1.48504 * 110.00016 * 301.31726 * 20 18 17 37 37 H 1.07999 * 126.83697 * 180.02562 * 21 17 16 38 38 H 1.09004 * 113.61451 * 105.47354 * 22 5 3 39 39 H 1.08994 * 113.61477 * 334.56656 * 22 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4032 2.2094 0.0005 5 6 3.5662 1.2750 0.0006 6 1 4.0243 0.6363 0.7558 7 6 4.1915 1.1235 -1.3961 8 6 5.1813 2.2269 -0.9866 9 1 6.0815 1.8497 -0.5013 10 7 5.4707 3.1830 -2.0582 11 6 6.6689 3.1616 -2.6748 12 8 7.5098 2.3483 -2.3421 13 6 6.9596 4.1224 -3.7524 14 6 8.1215 4.2305 -4.4660 15 6 9.3493 3.3755 -4.2859 16 7 7.9806 5.2288 -5.3586 17 6 6.7445 5.7950 -5.2444 18 6 6.2265 6.9436 -6.0711 19 8 6.0068 8.0763 -5.2280 20 14 7.4767 7.3785 -7.3821 21 6 6.0640 5.1609 -4.2730 22 6 4.1075 2.7144 0.0011 23 1 -0.3634 -1.0277 -0.0005 24 1 -0.3634 0.5137 0.8899 25 1 -0.3634 0.5138 -0.8899 26 1 3.5241 1.4147 -2.2073 27 1 4.6622 0.1545 -1.5624 28 1 4.7999 3.8314 -2.3239 29 1 9.2823 2.5022 -4.9347 30 1 10.2360 3.9539 -4.5455 31 1 9.4178 3.0520 -3.2472 32 1 8.6622 5.5084 -5.9896 33 1 5.2881 6.6559 -6.5451 34 1 6.8010 8.3878 -4.7727 35 1 6.9780 8.5104 -8.2039 36 1 8.7703 7.7418 -6.7497 37 1 5.0581 5.3736 -3.9424 38 1 4.5103 3.0291 0.9639 39 1 3.4172 3.4407 -0.4278 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10970304_9865296.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:37:30 Heat of formation + Delta-G solvation = -81.535884 kcal Electronic energy + Delta-G solvation = -23405.171094 eV Core-core repulsion = 19702.190326 eV Total energy + Delta-G solvation = -3702.980768 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.130 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.51114 -41.83106 -40.38058 -38.85976 -37.94238 -37.24818 -34.44329 -32.82998 -32.07048 -29.38774 -28.96698 -27.04244 -26.84338 -25.45938 -23.64791 -22.10671 -21.49263 -21.10813 -20.15148 -18.86989 -18.77536 -17.90082 -17.73506 -17.34371 -16.93337 -16.63900 -16.40761 -16.14568 -15.73926 -15.43540 -15.00242 -14.68580 -14.56706 -14.28463 -14.11293 -14.00824 -13.86577 -13.60927 -13.42624 -13.40873 -12.98519 -12.81302 -12.66332 -12.46427 -12.26366 -12.20266 -11.78068 -11.74886 -11.30069 -10.93321 -10.57066 -10.02952 -9.81707 -9.16747 -5.24572 0.76394 0.98487 1.19895 1.23803 1.28662 1.67398 1.71999 2.00026 2.48977 2.62371 3.18788 3.25374 3.33860 3.57866 3.69256 3.75517 3.81725 3.99643 4.12539 4.18278 4.19141 4.26580 4.38882 4.46586 4.52173 4.56435 4.61847 4.63508 4.68722 4.75323 4.80939 4.87695 4.99343 5.11469 5.26859 5.42134 5.60733 5.69997 5.84954 6.23168 6.31336 6.69012 6.77650 7.45832 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.109 4.109 6 H 0.131 0.869 7 C -0.134 4.134 8 C 0.129 3.871 9 H 0.124 0.876 10 N -0.717 5.717 11 C 0.596 3.404 12 O -0.547 6.547 13 C -0.242 4.242 14 C 0.125 3.875 15 C -0.100 4.100 16 N -0.546 5.546 17 C -0.027 4.027 18 C -0.041 4.041 19 O -0.522 6.522 20 Si 0.671 3.329 21 C -0.127 4.127 22 C -0.127 4.127 23 H 0.103 0.897 24 H 0.064 0.936 25 H 0.063 0.937 26 H 0.091 0.909 27 H 0.089 0.911 28 H 0.402 0.598 29 H 0.083 0.917 30 H 0.066 0.934 31 H 0.104 0.896 32 H 0.414 0.586 33 H 0.130 0.870 34 H 0.377 0.623 35 H -0.246 1.246 36 H -0.256 1.256 37 H 0.147 0.853 38 H 0.088 0.912 39 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.153 -1.110 -2.711 3.148 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.393 6.393 5 C -0.129 4.129 6 H 0.149 0.851 7 C -0.173 4.173 8 C 0.024 3.976 9 H 0.142 0.858 10 N -0.367 5.367 11 C 0.386 3.614 12 O -0.426 6.426 13 C -0.252 4.252 14 C 0.007 3.993 15 C -0.157 4.157 16 N -0.145 5.145 17 C -0.135 4.135 18 C -0.152 4.152 19 O -0.328 6.328 20 Si 0.570 3.430 21 C -0.152 4.152 22 C -0.166 4.166 23 H 0.121 0.879 24 H 0.083 0.917 25 H 0.082 0.918 26 H 0.109 0.891 27 H 0.108 0.892 28 H 0.238 0.762 29 H 0.101 0.899 30 H 0.084 0.916 31 H 0.122 0.878 32 H 0.253 0.747 33 H 0.147 0.853 34 H 0.225 0.775 35 H -0.169 1.169 36 H -0.181 1.181 37 H 0.165 0.835 38 H 0.106 0.894 39 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges 1.501 -0.759 -3.127 3.551 hybrid contribution -0.376 1.140 0.630 1.356 sum 1.126 0.381 -2.497 2.766 Atomic orbital electron populations 1.23318 0.76005 1.03987 1.02679 1.86524 1.23670 1.33318 1.83793 1.23508 0.91620 0.81395 0.72003 1.90681 1.66998 1.36446 1.45144 1.22323 0.87575 1.01081 1.01924 0.85086 1.23458 0.98057 1.01307 0.94444 1.22383 0.97626 0.89525 0.88114 0.85795 1.45699 1.16472 1.37028 1.37510 1.17342 0.81314 0.82334 0.80445 1.90750 1.46561 1.39517 1.65815 1.20094 0.96129 1.04177 1.04803 1.20414 0.97086 0.91007 0.90832 1.20658 0.91305 0.97760 1.05954 1.41738 1.13996 1.28108 1.30653 1.20466 0.86798 1.01921 1.04332 1.24386 1.09349 0.83841 0.97604 1.86659 1.37768 1.46041 1.62334 0.95546 0.77025 0.89208 0.81176 1.21810 0.99449 0.96157 0.97736 1.23397 0.97294 0.94835 1.01028 0.87865 0.91749 0.91793 0.89085 0.89206 0.76249 0.89870 0.91554 0.87781 0.74741 0.85264 0.77493 1.16946 1.18095 0.83548 0.89359 0.87956 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.59 10.57 -39.26 -0.41 -1.01 16 3 C 0.47 0.93 7.48 36.01 0.27 1.20 16 4 O -0.51 -2.36 15.65 -18.75 -0.29 -2.65 16 5 C -0.11 0.09 4.26 -90.96 -0.39 -0.30 16 6 H 0.13 -0.33 8.14 -51.93 -0.42 -0.76 16 7 C -0.13 0.11 7.43 -25.92 -0.19 -0.08 16 8 C 0.13 -0.05 4.24 -67.10 -0.28 -0.33 16 9 H 0.12 0.04 7.46 -51.93 -0.39 -0.34 16 10 N -0.72 -0.23 5.35 -54.12 -0.29 -0.52 16 11 C 0.60 1.66 7.81 -12.59 -0.10 1.56 16 12 O -0.55 -2.96 14.42 5.25 0.08 -2.89 16 13 C -0.24 -0.42 6.29 -103.35 -0.65 -1.07 16 14 C 0.13 0.08 7.17 -81.88 -0.59 -0.51 16 15 C -0.10 0.05 9.88 36.01 0.36 0.41 16 16 N -0.55 0.71 5.41 -5.42 -0.03 0.68 16 17 C -0.03 0.02 6.09 -81.86 -0.50 -0.48 16 18 C -0.04 0.07 2.98 36.01 0.11 0.17 16 19 O -0.52 -0.01 12.88 -35.23 -0.45 -0.46 16 20 Si 0.67 -1.78 30.96 -169.99 -5.26 -7.05 16 21 C -0.13 -0.05 10.45 -37.50 -0.39 -0.44 16 22 C -0.13 0.12 7.16 -25.89 -0.19 -0.06 16 23 H 0.10 -0.28 8.14 -51.92 -0.42 -0.70 16 24 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 25 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 26 H 0.09 -0.04 8.09 -51.93 -0.42 -0.46 16 27 H 0.09 -0.09 8.14 -51.93 -0.42 -0.52 16 28 H 0.40 -0.51 7.85 -40.82 -0.32 -0.83 16 29 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 31 H 0.10 0.15 6.47 -51.92 -0.34 -0.19 16 32 H 0.41 -1.52 6.72 -40.82 -0.27 -1.79 16 33 H 0.13 -0.31 7.96 -51.93 -0.41 -0.73 16 34 H 0.38 -0.98 8.70 45.56 0.40 -0.58 16 35 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 36 H -0.26 0.27 7.11 56.52 0.40 0.67 16 37 H 0.15 -0.13 7.70 -52.49 -0.40 -0.54 16 38 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 39 H 0.10 -0.01 7.41 -51.93 -0.38 -0.40 16 LS Contribution 334.73 15.07 5.04 5.04 Total: 0.00 -9.03 334.73 -8.22 -17.25 By element: Atomic # 1 Polarization: -4.39 SS G_CDS: -5.12 Total: -9.52 kcal Atomic # 6 Polarization: 2.59 SS G_CDS: -1.48 Total: 1.11 kcal Atomic # 7 Polarization: 0.48 SS G_CDS: -0.32 Total: 0.16 kcal Atomic # 8 Polarization: -5.93 SS G_CDS: -1.09 Total: -7.01 kcal Atomic # 14 Polarization: -1.78 SS G_CDS: -5.26 Total: -7.05 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -9.03 -8.22 -17.25 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10970304_9865296.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.281 kcal (2) G-P(sol) polarization free energy of solvation -9.030 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.312 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.224 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.254 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.536 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds