Wall clock time and date at job start Sat Mar 6 2021 19:36:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.35532 * 125.68110 * 2 1 4 4 C 1.35449 * 108.87767 * 179.97438 * 3 2 1 5 5 C 1.50693 * 126.07030 * 179.97438 * 4 3 2 6 6 O 1.42904 * 109.47144 * 65.00128 * 5 4 3 7 7 Si 1.86302 * 109.47271 * 184.99917 * 5 4 3 8 8 H 1.48502 * 109.47289 * 60.00048 * 7 5 4 9 9 H 1.48495 * 109.47571 * 180.02562 * 7 5 4 10 10 H 1.48503 * 109.47005 * 300.00164 * 7 5 4 11 11 C 1.39837 * 107.86150 * 0.02562 * 4 3 2 12 12 C 1.37654 * 125.67634 * 179.69047 * 2 1 3 13 13 C 1.46675 * 126.23394 * 0.25996 * 12 2 1 14 14 O 1.21692 * 120.00134 * 4.53981 * 13 12 2 15 15 N 1.34781 * 119.99918 * 184.54304 * 13 12 2 16 16 C 1.46503 * 119.99846 * 185.09843 * 15 13 12 17 17 C 1.50700 * 109.46949 * 180.02562 * 16 15 13 18 18 C 1.38208 * 119.99710 * 270.27220 * 17 16 15 19 19 C 1.38257 * 119.99761 * 180.02562 * 18 17 16 20 20 C 1.38217 * 119.99943 * 359.97438 * 19 18 17 21 21 C 1.38254 * 120.00188 * 359.97438 * 20 19 18 22 Xx 1.80997 * 119.99846 * 179.97438 * 21 20 19 23 22 F 8.73833 * 92.66861 * 226.55860 * 10 1 2 24 23 F 1.61006 * 90.00173 * 315.00173 * 22 21 20 25 24 F 1.60999 * 89.99847 * 135.00425 * 22 21 20 26 25 F 1.60995 * 90.00069 * 45.00577 * 22 21 20 27 26 F 1.61001 * 89.99805 * 225.00346 * 22 21 20 28 27 C 1.38213 * 119.99877 * 359.82319 * 21 20 19 29 28 H 1.08996 * 109.47473 * 264.77384 * 1 2 3 30 29 H 1.09008 * 109.46753 * 24.77712 * 1 2 3 31 30 H 1.08997 * 109.46926 * 144.77350 * 1 2 3 32 31 H 1.08007 * 125.56095 * 359.97438 * 3 2 1 33 32 H 1.08995 * 109.47379 * 304.99869 * 5 4 3 34 33 H 0.96695 * 113.99888 * 60.00101 * 6 5 4 35 34 H 1.08005 * 126.46041 * 179.97438 * 11 4 3 36 35 H 0.96998 * 119.99706 * 5.10189 * 15 13 12 37 36 H 1.09005 * 109.47034 * 299.99856 * 16 15 13 38 37 H 1.08995 * 109.47425 * 59.99758 * 16 15 13 39 38 H 1.07999 * 120.00195 * 359.97438 * 18 17 16 40 39 H 1.08001 * 119.99889 * 179.97438 * 19 18 17 41 40 H 1.08000 * 119.99828 * 179.97438 * 20 19 18 42 41 H 1.08001 * 119.99898 * 179.97438 * 28 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1009 0.0000 4 6 3.5522 0.7093 0.0006 5 6 4.7537 1.6189 0.0002 6 8 4.7895 2.3612 1.2208 7 14 6.3050 0.5985 -0.1518 8 1 6.2678 -0.1729 -1.4201 9 1 7.4890 1.4947 -0.1515 10 1 6.3947 -0.3398 0.9958 11 6 3.5780 -0.6888 0.0004 12 6 2.2678 -1.1182 0.0060 13 6 1.8124 -2.5124 0.0082 14 8 0.6251 -2.7649 -0.0789 15 7 2.7088 -3.5140 0.1067 16 6 2.2666 -4.9064 -0.0033 17 6 3.4537 -5.8234 0.1412 18 6 4.1750 -6.2010 -0.9756 19 6 5.2638 -7.0427 -0.8432 20 6 5.6312 -7.5061 0.4061 21 6 4.9102 -7.1275 1.5234 22 9 5.8217 -8.2719 4.6168 23 9 5.5692 -9.2172 2.5564 24 9 5.2126 -6.2527 3.7619 25 9 6.9328 -7.4137 2.8254 26 9 3.8490 -8.0562 3.4930 27 6 3.8243 -6.2827 1.3915 28 1 -0.3634 -0.0936 1.0233 29 1 -0.3633 0.9331 -0.4307 30 1 -0.3633 -0.8395 -0.5928 31 1 1.9082 2.1236 -0.0004 32 1 4.6878 2.3075 -0.8420 33 1 4.8482 1.8113 2.0140 34 1 4.4583 -1.3145 0.0003 35 1 3.6468 -3.3130 0.2505 36 1 1.5440 -5.1213 0.7840 37 1 1.8014 -5.0641 -0.9763 38 1 3.8877 -5.8392 -1.9518 39 1 5.8273 -7.3381 -1.7159 40 1 6.4814 -8.1639 0.5094 41 1 3.2609 -5.9873 2.2642 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10974094_10803934.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:36:17 Heat of formation + Delta-G solvation = 377.885628 kcal Electronic energy + Delta-G solvation = -33178.266921 eV Core-core repulsion = 27616.109313 eV Total energy + Delta-G solvation = -5562.157608 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 368.107 amu Computer time = 31.93 seconds Orbital eigenvalues (eV) -44.40308 -44.25827 -44.21081 -44.11509 -43.54883 -42.54729 -41.38168 -40.09740 -37.65735 -36.38686 -34.09200 -33.14356 -32.46961 -30.77496 -28.51316 -27.57536 -25.62898 -24.08852 -23.69944 -22.60233 -21.13645 -20.73503 -19.18675 -18.24533 -17.42253 -17.37130 -17.22397 -16.83868 -16.68624 -15.90377 -15.76312 -15.68054 -15.44032 -15.28014 -15.25342 -15.06752 -14.99501 -14.83847 -14.72368 -14.49708 -14.29401 -14.22765 -14.18064 -14.14809 -14.05020 -13.91945 -13.80948 -13.66292 -13.63700 -13.63000 -13.33546 -13.20119 -13.08937 -12.80924 -12.31289 -12.23470 -12.02419 -11.95582 -11.74450 -11.41986 -11.29788 -10.80835 -10.69219 -10.36345 -10.28299 -9.73126 -9.22456 -5.27763 -4.82250 -3.11097 -0.74900 -0.58748 0.38357 1.33066 1.50718 1.52291 1.61548 1.68916 1.88752 2.06320 2.24828 2.37231 2.62724 2.87755 3.28312 3.41135 3.60155 3.64265 3.70916 3.78569 3.94683 4.08811 4.22234 4.24805 4.32904 4.36217 4.39309 4.54494 4.62471 4.71056 4.73119 4.74415 4.79774 4.88315 5.08777 5.13958 5.17206 5.66754 5.92786 6.17190 6.33855 6.84167 7.02674 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.065 3.935 2 N -0.416 5.416 3 C 0.052 3.948 4 C -0.220 4.220 5 C -0.046 4.046 6 O -0.560 6.560 7 Si 0.982 3.018 8 H -0.247 1.247 9 H -0.286 1.286 10 H -0.253 1.253 11 C -0.136 4.136 12 C -0.073 4.073 13 C 0.594 3.406 14 O -0.574 6.574 15 N -0.710 5.710 16 C 0.164 3.836 17 C -0.044 4.044 18 C -0.055 4.055 19 C -0.030 4.030 20 C -0.104 4.104 21 C 0.319 3.681 22 F -0.220 7.220 23 F -0.155 7.155 24 F -0.167 7.167 25 F -0.158 7.158 26 F -0.164 7.164 27 C -0.104 4.104 28 H 0.076 0.924 29 H 0.109 0.891 30 H 0.089 0.911 31 H 0.189 0.811 32 H 0.118 0.882 33 H 0.386 0.614 34 H 0.163 0.837 35 H 0.417 0.583 36 H 0.084 0.916 37 H 0.122 0.878 38 H 0.212 0.788 39 H 0.227 0.773 40 H 0.183 0.817 41 H 0.170 0.830 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.448 3.992 -14.518 15.126 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.088 5.088 3 C -0.085 4.085 4 C -0.226 4.226 5 C -0.157 4.157 6 O -0.367 6.367 7 Si 0.806 3.194 8 H -0.170 1.170 9 H -0.212 1.212 10 H -0.177 1.177 11 C -0.162 4.162 12 C -0.186 4.186 13 C 0.383 3.617 14 O -0.455 6.455 15 N -0.363 5.363 16 C 0.042 3.958 17 C -0.044 4.044 18 C -0.072 4.072 19 C -0.047 4.047 20 C -0.121 4.121 21 C 0.314 3.686 22 F -0.220 7.220 23 F -0.154 7.154 24 F -0.165 7.165 25 F -0.157 7.157 26 F -0.163 7.163 27 C -0.122 4.122 28 H 0.095 0.905 29 H 0.127 0.873 30 H 0.107 0.893 31 H 0.206 0.794 32 H 0.136 0.864 33 H 0.235 0.765 34 H 0.181 0.819 35 H 0.254 0.746 36 H 0.102 0.898 37 H 0.140 0.860 38 H 0.229 0.771 39 H 0.244 0.756 40 H 0.200 0.800 41 H 0.187 0.813 Dipole moment (debyes) X Y Z Total from point charges -2.022 3.756 -15.111 15.702 hybrid contribution 0.298 -0.640 2.585 2.679 sum -1.724 3.116 -12.527 13.023 Atomic orbital electron populations 1.22364 0.75033 1.05830 1.04311 1.44113 1.07596 1.05067 1.51976 1.22296 0.89938 0.92245 1.04012 1.19904 0.94993 0.93993 1.13723 1.24342 1.02211 0.99137 0.90028 1.86467 1.96873 1.37349 1.16036 0.85261 0.74971 0.77849 0.81335 1.17044 1.21170 1.17689 1.21461 0.94884 0.94988 1.04877 1.19983 0.90667 0.87676 1.20275 1.16990 0.85129 0.83939 0.75625 1.90829 1.17352 1.85171 1.52120 1.45539 1.11840 1.04840 1.74126 1.20401 0.92045 0.77313 1.06071 1.19926 0.98323 0.99031 0.87146 1.22359 0.91439 0.92550 1.00885 1.22143 0.96663 0.93986 0.91905 1.22379 1.02316 1.01929 0.85523 1.27689 0.98460 1.00075 0.42351 2.00000 1.54716 1.79058 1.88184 1.99920 1.78705 1.68721 1.68022 1.99920 1.68210 1.53522 1.94870 1.99919 1.46196 1.96426 1.73128 1.99920 1.30925 1.88675 1.96785 1.21786 0.94527 0.95240 1.00610 0.90526 0.87288 0.89254 0.79380 0.86405 0.76530 0.81947 0.74581 0.89762 0.85987 0.77110 0.75615 0.79954 0.81303 Number of geometries 1 Number of calculations of the screened coulomb radii 6 The total number of SCF iterations 553. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.25 10.49 127.77 1.34 1.09 16 2 N -0.42 0.56 3.16 -534.31 -1.69 -1.13 16 3 C 0.05 -0.15 11.28 83.48 0.94 0.79 16 4 C -0.22 0.70 5.40 -20.12 -0.11 0.59 16 5 C -0.05 0.19 3.00 71.23 0.21 0.40 16 6 O -0.56 0.83 12.88 -148.98 -1.92 -1.09 16 7 Si 0.98 -4.48 25.94 68.60 1.78 -2.70 16 8 H -0.25 1.34 7.11 99.48 0.71 2.04 16 9 H -0.29 -0.15 7.11 99.48 0.71 0.55 16 10 H -0.25 1.17 7.11 99.48 0.71 1.88 16 11 C -0.14 0.59 8.83 22.57 0.20 0.79 16 12 C -0.07 0.11 6.89 40.35 0.28 0.38 16 13 C 0.59 -1.14 7.77 86.45 0.67 -0.47 16 14 O -0.57 -2.59 14.78 -4.32 -0.06 -2.66 16 15 N -0.71 7.18 5.52 -470.81 -2.60 4.58 16 16 C 0.16 -2.21 5.80 85.63 0.50 -1.72 16 17 C -0.04 0.71 5.25 -19.87 -0.10 0.60 16 18 C -0.05 1.25 9.70 22.27 0.22 1.47 16 19 C -0.03 0.67 10.05 22.27 0.22 0.89 16 20 C -0.10 1.24 8.62 22.27 0.19 1.43 16 21 C 0.32 -0.97 4.82 22.27 0.11 -0.86 16 22 F -0.22 -5.75 16.68 44.97 0.75 -5.00 16 23 F -0.15 -2.21 15.32 44.97 0.69 -1.52 16 24 F -0.17 -2.55 15.30 44.97 0.69 -1.86 16 25 F -0.16 -2.21 15.31 44.97 0.69 -1.52 16 26 F -0.16 -2.58 15.33 44.97 0.69 -1.89 16 27 C -0.10 0.86 8.28 22.27 0.18 1.05 16 28 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 29 H 0.11 -0.95 8.12 -2.38 -0.02 -0.97 16 30 H 0.09 -0.08 6.53 -2.39 -0.02 -0.10 16 31 H 0.19 -1.27 8.06 -2.91 -0.02 -1.30 16 32 H 0.12 -0.65 7.96 -2.39 -0.02 -0.67 16 33 H 0.39 -2.70 8.70 -74.06 -0.64 -3.34 16 34 H 0.16 -1.57 5.82 -2.91 -0.02 -1.59 16 35 H 0.42 -5.91 7.41 -92.71 -0.69 -6.59 16 36 H 0.08 -0.86 8.09 -2.38 -0.02 -0.88 16 37 H 0.12 -2.00 8.09 -2.39 -0.02 -2.02 16 38 H 0.21 -6.27 8.06 -2.91 -0.02 -6.29 16 39 H 0.23 -6.80 8.06 -2.91 -0.02 -6.82 16 40 H 0.18 -2.11 7.40 -2.91 -0.02 -2.13 16 41 H 0.17 -0.96 7.40 -2.91 -0.02 -0.98 16 Total: 0.00 -42.28 375.54 4.41 -37.87 By element: Atomic # 1 Polarization: -30.05 SS G_CDS: 0.55 Total: -29.50 kcal Atomic # 6 Polarization: 1.58 SS G_CDS: 4.85 Total: 6.43 kcal Atomic # 7 Polarization: 7.73 SS G_CDS: -4.29 Total: 3.44 kcal Atomic # 8 Polarization: -1.76 SS G_CDS: -1.98 Total: -3.75 kcal Atomic # 9 Polarization: -15.30 SS G_CDS: 3.50 Total: -11.79 kcal Atomic # 14 Polarization: -4.48 SS G_CDS: 1.78 Total: -2.70 kcal Total: -42.28 4.41 -37.87 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10974094_10803934.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 415.753 kcal (2) G-P(sol) polarization free energy of solvation -42.278 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 373.475 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.411 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.867 kcal (6) G-S(sol) free energy of system = (1) + (5) 377.886 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 31.93 seconds