Wall clock time and date at job start Sat Mar 6 2021 17:36:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 O 1.42905 * 109.46730 * 2 1 4 4 C 1.35892 * 117.00277 * 275.32587 * 3 2 1 5 5 C 1.38738 * 120.05681 * 5.08264 * 4 3 2 6 6 C 1.38136 * 119.94305 * 179.74818 * 5 4 3 7 7 C 1.38266 * 120.05924 * 0.50587 * 6 5 4 8 8 C 1.50697 * 119.94666 * 179.74459 * 7 6 5 9 9 O 1.42895 * 109.47522 * 245.02365 * 8 7 6 10 10 Si 1.86302 * 109.47139 * 5.02757 * 8 7 6 11 11 C 1.38270 * 120.10798 * 359.77131 * 7 6 5 12 12 C 1.38144 * 120.05548 * 359.97438 * 11 7 6 13 13 C 1.50700 * 109.47014 * 119.99915 * 2 1 3 14 14 O 1.21281 * 119.99880 * 244.99991 * 13 2 1 15 15 N 1.34780 * 119.99893 * 65.00583 * 13 2 1 16 16 C 1.46499 * 119.99907 * 179.97438 * 15 13 2 17 17 C 1.52995 * 109.47021 * 179.97438 * 16 15 13 18 18 H 1.09005 * 109.47164 * 55.00151 * 17 16 15 19 19 C 1.53000 * 109.47180 * 175.00146 * 17 16 15 20 20 C 1.53004 * 109.47261 * 179.97438 * 19 17 16 21 21 C 1.52994 * 109.47450 * 300.00313 * 20 19 17 22 22 H 1.09005 * 109.46770 * 299.99884 * 21 20 19 23 23 C 1.50698 * 109.47352 * 179.97438 * 21 20 19 24 24 N 1.34775 * 120.00054 * 179.97438 * 23 21 20 25 25 O 1.21280 * 119.99624 * 359.97438 * 23 21 20 26 26 C 1.53000 * 109.47144 * 59.99616 * 21 20 19 27 27 C 1.52994 * 109.47406 * 295.00382 * 17 16 15 28 28 H 1.08997 * 109.47374 * 60.00276 * 1 2 3 29 29 H 1.09003 * 109.46578 * 180.02562 * 1 2 3 30 30 H 1.08996 * 109.46936 * 299.99605 * 1 2 3 31 31 H 1.08996 * 109.46936 * 240.00395 * 2 1 3 32 32 H 1.08006 * 120.02128 * 0.02562 * 5 4 3 33 33 H 1.08004 * 119.97016 * 180.23639 * 6 5 4 34 34 H 1.09005 * 109.47032 * 125.02471 * 8 7 6 35 35 H 0.96703 * 114.00009 * 60.00159 * 9 8 7 36 36 H 1.48503 * 110.00163 * 58.67894 * 10 8 7 37 37 H 1.48503 * 109.99980 * 179.97438 * 10 8 7 38 38 H 1.07998 * 119.96890 * 179.97438 * 11 7 6 39 39 H 1.08002 * 120.02631 * 179.97438 * 12 11 7 40 40 H 0.96999 * 120.00115 * 359.97438 * 15 13 2 41 41 H 1.09001 * 109.46889 * 59.99722 * 16 15 13 42 42 H 1.08997 * 109.47381 * 300.00210 * 16 15 13 43 43 H 1.08996 * 109.46988 * 60.00002 * 19 17 16 44 44 H 1.09006 * 109.47106 * 299.99971 * 19 17 16 45 45 H 1.09003 * 109.46899 * 179.97438 * 20 19 17 46 46 H 1.09005 * 109.46514 * 60.00002 * 20 19 17 47 47 H 0.97000 * 119.99819 * 359.97438 * 24 23 21 48 48 H 0.96998 * 120.00194 * 179.97438 * 24 23 21 49 49 H 1.08996 * 109.47276 * 59.99928 * 26 21 20 50 50 H 1.09006 * 109.47106 * 180.02562 * 26 21 20 51 51 H 1.09007 * 109.47232 * 300.00258 * 27 17 16 52 52 H 1.09003 * 109.47558 * 59.99931 * 27 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3474 0.0000 4 6 2.1060 1.9665 -1.2056 5 6 1.6544 1.3305 -2.3529 6 6 1.7521 1.9642 -3.5764 7 6 2.3089 3.2270 -3.6598 8 6 2.4195 3.9136 -4.9967 9 8 3.7980 4.0837 -5.3324 10 14 1.5867 2.8742 -6.2994 11 6 2.7650 3.8607 -2.5186 12 6 2.6647 3.2334 -1.2919 13 6 2.0324 -0.7104 1.2305 14 8 2.6530 -0.0979 2.0734 15 7 1.7920 -2.0264 1.3941 16 6 2.2808 -2.7172 2.5900 17 6 1.8755 -4.1912 2.5290 18 1 2.2345 -4.6285 1.5973 19 6 2.4908 -4.9388 3.7137 20 6 2.0850 -6.4128 3.6531 21 6 0.5604 -6.5250 3.7155 22 1 0.2018 -6.0874 4.6472 23 6 0.1607 -7.9768 3.6551 24 7 -1.1422 -8.3192 3.6957 25 8 1.0115 -8.8369 3.5700 26 6 -0.0549 -5.7774 2.5308 27 6 0.3509 -4.3040 2.5911 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3632 -1.0277 0.0005 30 1 -0.3633 0.5138 0.8900 31 1 1.8933 -0.5138 -0.8900 32 1 1.2227 0.3425 -2.2887 33 1 1.3972 1.4710 -4.4693 34 1 1.9350 4.8887 -4.9455 35 1 4.2926 3.2551 -5.3954 36 1 0.1599 2.6634 -5.9456 37 1 1.6883 3.5408 -7.6225 38 1 3.1999 4.8469 -2.5864 39 1 3.0215 3.7286 -0.4009 40 1 1.2954 -2.5163 0.7201 41 1 1.8465 -2.2577 3.4779 42 1 3.3671 -2.6402 2.6356 43 1 2.1318 -4.5015 4.6453 44 1 3.5770 -4.8585 3.6694 45 1 2.5238 -6.9454 4.4968 46 1 2.4437 -6.8503 2.7213 47 1 -1.8226 -7.6313 3.7641 48 1 -1.3995 -9.2536 3.6565 49 1 0.3038 -6.2149 1.5992 50 1 -1.1411 -5.8571 2.5755 51 1 -0.0081 -3.8666 3.5228 52 1 -0.0875 -3.7714 1.7471 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11352696_10157680.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:36:35 Heat of formation + Delta-G solvation = -137.611602 kcal Electronic energy + Delta-G solvation = -32146.385119 eV Core-core repulsion = 27690.596109 eV Total energy + Delta-G solvation = -4455.789010 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.192 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -41.80001 -41.16476 -40.58389 -39.23770 -38.73366 -37.14742 -35.93480 -34.71939 -33.61349 -32.27528 -31.79214 -31.64606 -31.36644 -27.54197 -26.62421 -25.26192 -24.15366 -23.68305 -23.32429 -22.34656 -21.52210 -21.15081 -20.56780 -19.51256 -18.68883 -18.40273 -18.06597 -17.60083 -17.12870 -16.92016 -16.74287 -16.44756 -16.28464 -15.92747 -15.75440 -15.67922 -15.45885 -15.20284 -15.01392 -14.79724 -14.64884 -14.57184 -14.43026 -14.07640 -13.88738 -13.66295 -13.48132 -13.36624 -13.26558 -13.15375 -12.88556 -12.85305 -12.24238 -12.17269 -12.05580 -12.04225 -12.00947 -11.76126 -11.67998 -11.37631 -11.06396 -10.90926 -10.78450 -10.63331 -10.39112 -10.18099 -10.04257 -9.22185 -4.98184 0.27132 0.30074 1.34954 1.44303 1.53116 1.64938 1.66267 2.00265 2.52629 2.63594 2.65291 3.48548 3.57569 3.60938 3.65490 3.69213 3.73611 3.76282 3.85186 3.88724 3.95470 4.02298 4.12418 4.23905 4.29493 4.37101 4.42961 4.48831 4.49287 4.50007 4.57942 4.59970 4.65160 4.69309 4.72280 4.78961 4.88891 4.96828 5.04275 5.11165 5.14238 5.17201 5.19200 5.23209 5.25563 5.28819 5.32762 5.38956 5.49793 5.55051 5.70171 5.89899 6.27460 6.47706 6.48137 6.80149 7.12517 7.36386 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C 0.062 3.938 3 O -0.315 6.315 4 C 0.122 3.878 5 C -0.201 4.201 6 C -0.072 4.072 7 C -0.162 4.162 8 C -0.074 4.074 9 O -0.559 6.559 10 Si 0.782 3.218 11 C -0.061 4.061 12 C -0.168 4.168 13 C 0.514 3.486 14 O -0.574 6.574 15 N -0.704 5.704 16 C 0.126 3.874 17 C -0.090 4.090 18 H 0.087 0.913 19 C -0.109 4.109 20 C -0.097 4.097 21 C -0.104 4.104 22 H 0.116 0.884 23 C 0.513 3.487 24 N -0.840 5.840 25 O -0.600 6.600 26 C -0.104 4.104 27 C -0.111 4.111 28 H 0.086 0.914 29 H 0.113 0.887 30 H 0.057 0.943 31 H 0.131 0.869 32 H 0.165 0.835 33 H 0.157 0.843 34 H 0.102 0.898 35 H 0.395 0.605 36 H -0.280 1.280 37 H -0.304 1.304 38 H 0.131 0.869 39 H 0.124 0.876 40 H 0.420 0.580 41 H 0.062 0.938 42 H 0.055 0.945 43 H 0.073 0.927 44 H 0.066 0.934 45 H 0.053 0.947 46 H 0.056 0.944 47 H 0.418 0.582 48 H 0.404 0.596 49 H 0.065 0.935 50 H 0.090 0.910 51 H 0.073 0.927 52 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.355 -4.932 -3.294 9.448 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.230 4.230 2 C 0.003 3.997 3 O -0.228 6.228 4 C 0.076 3.924 5 C -0.220 4.220 6 C -0.089 4.089 7 C -0.163 4.163 8 C -0.184 4.184 9 O -0.367 6.367 10 Si 0.688 3.312 11 C -0.079 4.079 12 C -0.187 4.187 13 C 0.300 3.700 14 O -0.452 6.452 15 N -0.358 5.358 16 C 0.003 3.997 17 C -0.109 4.109 18 H 0.105 0.895 19 C -0.147 4.147 20 C -0.136 4.136 21 C -0.125 4.125 22 H 0.134 0.866 23 C 0.299 3.701 24 N -0.403 5.403 25 O -0.481 6.481 26 C -0.142 4.142 27 C -0.148 4.148 28 H 0.104 0.896 29 H 0.132 0.868 30 H 0.076 0.924 31 H 0.148 0.852 32 H 0.182 0.818 33 H 0.174 0.826 34 H 0.119 0.881 35 H 0.245 0.755 36 H -0.207 1.207 37 H -0.233 1.233 38 H 0.149 0.851 39 H 0.142 0.858 40 H 0.258 0.742 41 H 0.081 0.919 42 H 0.074 0.926 43 H 0.092 0.908 44 H 0.085 0.915 45 H 0.072 0.928 46 H 0.075 0.925 47 H 0.249 0.751 48 H 0.234 0.766 49 H 0.084 0.916 50 H 0.109 0.891 51 H 0.091 0.909 52 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -7.021 -4.256 -3.116 8.782 hybrid contribution -0.338 0.309 0.543 0.710 sum -7.359 -3.947 -2.574 8.738 Atomic orbital electron populations 1.22380 0.90395 1.05909 1.04300 1.22471 0.97261 0.82000 0.97943 1.86197 1.81448 1.27211 1.27977 1.19235 0.95748 0.92863 0.84513 1.21508 1.06243 1.02776 0.91424 1.21059 0.96553 0.93394 0.97929 1.20358 1.03564 0.96364 0.95965 1.25206 0.88698 1.05589 0.98886 1.86469 1.20665 1.37411 1.92185 0.93802 0.78522 0.85334 0.73586 1.20909 0.96518 0.99725 0.90730 1.20615 1.04458 0.94533 0.99062 1.20547 0.79169 0.82872 0.87438 1.90760 1.41699 1.67159 1.45588 1.45708 1.57537 1.07874 1.24723 1.21416 0.98933 0.92161 0.87224 1.21362 0.97074 0.92225 1.00215 0.89456 1.21488 1.00824 0.93892 0.98517 1.21269 0.93689 0.96400 1.02194 1.21409 0.97666 0.90475 1.02997 0.86610 1.21222 0.82751 0.92217 0.73894 1.43840 1.07329 1.13193 1.75966 1.90747 1.51820 1.53683 1.51802 1.21521 1.01335 0.95122 0.96232 1.21617 0.93752 0.95633 1.03839 0.89560 0.86808 0.92388 0.85186 0.81802 0.82622 0.88062 0.75542 1.20693 1.23261 0.85073 0.85763 0.74206 0.91917 0.92643 0.90842 0.91527 0.92848 0.92469 0.75086 0.76564 0.91646 0.89130 0.90853 0.89533 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 1.40 9.12 71.98 0.66 2.05 16 2 C 0.06 -0.18 2.64 29.85 0.08 -0.10 16 3 O -0.31 -1.89 9.34 -73.35 -0.68 -2.58 16 4 C 0.12 0.41 6.60 22.51 0.15 0.55 16 5 C -0.20 0.62 8.24 22.37 0.18 0.81 16 6 C -0.07 0.26 8.66 22.25 0.19 0.45 16 7 C -0.16 0.01 5.35 -19.85 -0.11 -0.10 16 8 C -0.07 0.05 2.80 71.23 0.20 0.25 16 9 O -0.56 -0.36 12.83 -148.98 -1.91 -2.27 16 10 Si 0.78 -2.88 29.80 68.60 2.04 -0.84 16 11 C -0.06 -0.18 9.68 22.26 0.22 0.03 16 12 C -0.17 -0.86 9.99 22.36 0.22 -0.63 16 13 C 0.51 1.06 7.18 87.66 0.63 1.69 16 14 O -0.57 -8.14 16.51 15.95 0.26 -7.87 16 15 N -0.70 4.38 5.25 -463.07 -2.43 1.95 16 16 C 0.13 -0.55 5.06 86.38 0.44 -0.11 16 17 C -0.09 0.79 2.23 -10.80 -0.02 0.76 16 18 H 0.09 -0.81 8.14 -2.38 -0.02 -0.83 16 19 C -0.11 0.61 5.20 30.60 0.16 0.77 16 20 C -0.10 0.19 4.49 30.59 0.14 0.33 16 21 C -0.10 0.61 2.53 -11.54 -0.03 0.58 16 22 H 0.12 -1.03 8.14 -2.38 -0.02 -1.05 16 23 C 0.51 0.16 7.42 87.66 0.65 0.81 16 24 N -0.84 6.01 8.77 -173.54 -1.52 4.49 16 25 O -0.60 -6.97 16.82 -3.03 -0.05 -7.03 16 26 C -0.10 1.13 5.10 30.58 0.16 1.29 16 27 C -0.11 1.33 5.07 30.58 0.16 1.49 16 28 H 0.09 -0.78 6.90 -2.39 -0.02 -0.79 16 29 H 0.11 -1.73 7.92 -2.39 -0.02 -1.75 16 30 H 0.06 -0.20 8.14 -2.39 -0.02 -0.22 16 31 H 0.13 -1.23 6.31 -2.39 -0.02 -1.24 16 32 H 0.16 -1.66 5.43 -2.91 -0.02 -1.68 16 33 H 0.16 -1.48 4.90 -2.91 -0.01 -1.49 16 34 H 0.10 0.10 7.96 -2.38 -0.02 0.08 16 35 H 0.39 -2.99 8.70 -74.06 -0.64 -3.63 16 36 H -0.28 -0.03 7.11 99.48 0.71 0.67 16 37 H -0.30 -1.40 7.11 99.48 0.71 -0.69 16 38 H 0.13 0.30 8.06 -2.91 -0.02 0.28 16 39 H 0.12 0.73 8.06 -2.91 -0.02 0.71 16 40 H 0.42 -5.84 7.44 -92.71 -0.69 -6.53 16 41 H 0.06 -0.11 8.14 -2.39 -0.02 -0.13 16 42 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 43 H 0.07 -0.45 8.14 -2.39 -0.02 -0.47 16 44 H 0.07 -0.28 8.14 -2.38 -0.02 -0.29 16 45 H 0.05 0.11 8.10 -2.39 -0.02 0.09 16 46 H 0.06 0.06 8.10 -2.38 -0.02 0.04 16 47 H 0.42 -5.85 8.25 -92.71 -0.76 -6.61 16 48 H 0.40 -2.86 8.93 -92.71 -0.83 -3.68 16 49 H 0.06 -0.58 8.14 -2.39 -0.02 -0.60 16 50 H 0.09 -1.32 7.57 -2.38 -0.02 -1.33 16 51 H 0.07 -0.84 8.14 -2.38 -0.02 -0.86 16 52 H 0.09 -1.32 7.18 -2.39 -0.02 -1.34 16 Total: 0.00 -34.48 413.97 -2.13 -36.62 By element: Atomic # 1 Polarization: -31.50 SS G_CDS: -1.91 Total: -33.41 kcal Atomic # 6 Polarization: 6.86 SS G_CDS: 4.06 Total: 10.93 kcal Atomic # 7 Polarization: 10.39 SS G_CDS: -3.95 Total: 6.44 kcal Atomic # 8 Polarization: -17.36 SS G_CDS: -2.38 Total: -19.74 kcal Atomic # 14 Polarization: -2.88 SS G_CDS: 2.04 Total: -0.84 kcal Total: -34.48 -2.13 -36.62 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11352696_10157680.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.994 kcal (2) G-P(sol) polarization free energy of solvation -34.485 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.479 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.133 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.618 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.612 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.48 seconds