Wall clock time and date at job start Sat Mar 6 2021 12:56:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.35458 * 125.55948 * 2 1 4 4 C 1.50697 * 126.07140 * 0.04162 * 3 2 1 5 5 O 1.42896 * 109.47373 * 125.32013 * 4 3 2 6 6 Si 1.86300 * 109.46979 * 245.31773 * 4 3 2 7 7 C 1.39837 * 107.85975 * 180.23781 * 3 2 1 8 8 C 1.50699 * 126.45732 * 179.75819 * 7 3 2 9 9 C 1.37875 * 107.08481 * 359.76181 * 7 3 2 10 10 C 1.46677 * 126.23116 * 180.02562 * 9 7 3 11 11 O 1.21700 * 119.99878 * 359.97438 * 10 9 7 12 12 N 1.34780 * 120.00279 * 179.97438 * 10 9 7 13 13 C 1.46498 * 120.00259 * 180.02562 * 12 10 9 14 14 C 1.52998 * 109.46963 * 179.97438 * 13 12 10 15 15 H 1.08998 * 109.47262 * 304.99799 * 14 13 12 16 16 C 1.53004 * 109.47042 * 64.99760 * 14 13 12 17 17 C 1.53007 * 109.46626 * 180.02562 * 16 14 13 18 18 C 1.52999 * 109.47123 * 299.99647 * 17 16 14 19 19 H 1.09005 * 109.47093 * 300.00260 * 18 17 16 20 20 C 1.50698 * 109.47083 * 180.02562 * 18 17 16 21 21 N 1.34772 * 119.99885 * 60.00403 * 20 18 17 22 22 O 1.21278 * 120.00257 * 240.00081 * 20 18 17 23 23 C 1.52996 * 109.46941 * 60.00184 * 18 17 16 24 24 C 1.52998 * 109.47478 * 299.99949 * 23 18 17 25 25 N 1.35528 * 125.56553 * 179.82532 * 2 1 3 26 26 H 1.09001 * 109.47433 * 275.38631 * 1 2 3 27 27 H 1.09002 * 109.47553 * 35.39014 * 1 2 3 28 28 H 1.08998 * 109.47108 * 155.38848 * 1 2 3 29 29 H 1.08999 * 109.46982 * 5.31891 * 4 3 2 30 30 H 0.96701 * 114.00410 * 180.02562 * 5 4 3 31 31 H 1.48494 * 109.99998 * 301.39603 * 6 4 3 32 32 H 1.48505 * 109.99939 * 62.71320 * 6 4 3 33 33 H 1.09000 * 109.47114 * 269.98374 * 8 7 3 34 34 H 1.09005 * 109.46979 * 29.97983 * 8 7 3 35 35 H 1.09002 * 109.47095 * 149.97982 * 8 7 3 36 36 H 0.96999 * 119.99436 * 0.02562 * 12 10 9 37 37 H 1.09000 * 109.46597 * 299.99537 * 13 12 10 38 38 H 1.08994 * 109.47533 * 59.99257 * 13 12 10 39 39 H 1.08994 * 109.47204 * 299.99771 * 16 14 13 40 40 H 1.08995 * 109.47218 * 60.00409 * 16 14 13 41 41 H 1.09008 * 109.46746 * 180.02562 * 17 16 14 42 42 H 1.08998 * 109.47548 * 60.00119 * 17 16 14 43 43 H 0.97001 * 120.00532 * 359.97438 * 21 20 18 44 44 H 0.97003 * 119.99873 * 180.02562 * 21 20 18 45 45 H 1.09007 * 109.46898 * 179.97438 * 23 18 17 46 46 H 1.09005 * 109.47165 * 60.00120 * 23 18 17 47 47 H 1.08998 * 109.47262 * 299.99865 * 24 23 18 48 48 H 1.08999 * 109.47256 * 179.97438 * 24 23 18 49 49 H 0.96999 * 125.67727 * 0.02562 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1020 0.0000 4 6 1.8198 2.5322 0.0009 5 8 2.4096 3.2293 1.1001 6 14 2.3193 3.3533 -1.5951 7 6 3.6269 0.6768 -0.0055 8 6 4.8485 1.5593 -0.0126 9 6 3.6121 -0.7018 -0.0033 10 6 4.7859 -1.5814 -0.0069 11 8 5.9049 -1.1029 -0.0128 12 7 4.6253 -2.9196 -0.0036 13 6 5.7977 -3.7981 -0.0066 14 6 5.3408 -5.2582 -0.0012 15 1 4.6734 -5.4270 0.8438 16 6 4.6010 -5.5659 -1.3047 17 6 4.1436 -7.0260 -1.2990 18 6 5.3629 -7.9420 -1.1762 19 1 6.0305 -7.7736 -2.0214 20 6 4.9124 -9.3800 -1.1712 21 7 4.2361 -9.8779 -2.2252 22 8 5.1586 -10.0893 -0.2187 23 6 6.1027 -7.6342 0.1272 24 6 6.5601 -6.1742 0.1216 25 7 2.2953 -1.1024 0.0034 26 1 -0.3634 0.0965 1.0231 27 1 -0.3634 0.8378 -0.5952 28 1 -0.3633 -0.9343 -0.4280 29 1 0.7343 2.5544 0.0968 30 1 2.1474 4.1579 1.1632 31 1 3.7948 3.2995 -1.7538 32 1 1.6602 2.6779 -2.7417 33 1 5.1384 1.7701 -1.0420 34 1 4.6241 2.4945 0.5005 35 1 5.6665 1.0516 0.4985 36 1 3.7335 -3.3010 0.0007 37 1 6.3929 -3.6065 -0.8994 38 1 6.4002 -3.6030 0.8805 39 1 3.7321 -4.9137 -1.3920 40 1 5.2684 -5.3972 -2.1498 41 1 3.6169 -7.2453 -2.2279 42 1 3.4761 -7.1944 -0.4540 43 1 4.0389 -9.3106 -2.9869 44 1 3.9458 -10.8035 -2.2218 45 1 6.9712 -8.2871 0.2149 46 1 5.4352 -7.8026 0.9723 47 1 7.2277 -6.0058 -0.7235 48 1 7.0868 -5.9549 1.0503 49 1 1.9834 -2.0209 0.0058 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11352696_12297754.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 12:56:18 Heat of formation + Delta-G solvation = -96.801221 kcal Electronic energy + Delta-G solvation = -29411.686813 eV Core-core repulsion = 25339.149896 eV Total energy + Delta-G solvation = -4072.536918 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.188 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -42.76494 -41.25280 -40.43088 -38.94658 -37.59285 -36.07270 -34.77339 -33.94100 -33.31096 -32.25066 -31.72475 -29.32218 -28.32400 -27.01684 -25.95578 -23.78979 -23.60935 -22.38957 -21.46413 -20.87162 -20.59593 -20.06256 -19.39994 -18.47679 -18.22588 -17.66341 -17.06370 -16.91649 -16.77779 -16.28562 -15.95131 -15.64226 -15.35948 -15.13174 -15.09695 -14.92265 -14.84069 -14.63814 -14.43428 -14.19760 -13.96525 -13.82956 -13.62725 -13.50594 -13.27007 -13.24990 -13.21098 -12.96283 -12.63936 -12.46514 -12.25512 -12.13255 -11.85658 -11.80928 -11.47627 -11.20138 -11.09444 -10.86298 -10.68993 -10.51352 -10.33909 -9.60371 -9.08572 -4.91779 0.24155 1.16842 1.58949 1.59597 1.73634 1.84849 2.03455 2.12475 2.20669 2.57286 3.51182 3.56086 3.58613 3.65251 3.72672 3.80766 3.92888 4.00998 4.04243 4.15630 4.16713 4.34138 4.35646 4.38935 4.41494 4.43375 4.49305 4.52864 4.60291 4.65118 4.68407 4.72667 4.78752 4.89566 4.94263 4.98534 5.04121 5.07592 5.10481 5.13494 5.17847 5.19918 5.24789 5.29969 5.45226 5.56744 5.73570 5.84667 6.26959 6.42171 6.43536 6.99821 7.07913 7.30652 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.092 3.908 3 C -0.201 4.201 4 C -0.024 4.024 5 O -0.563 6.563 6 Si 0.747 3.253 7 C -0.078 4.078 8 C -0.089 4.089 9 C -0.082 4.082 10 C 0.587 3.413 11 O -0.567 6.567 12 N -0.713 5.713 13 C 0.127 3.873 14 C -0.090 4.090 15 H 0.083 0.917 16 C -0.111 4.111 17 C -0.103 4.103 18 C -0.104 4.104 19 H 0.117 0.883 20 C 0.514 3.486 21 N -0.840 5.840 22 O -0.598 6.598 23 C -0.097 4.097 24 C -0.108 4.108 25 N -0.518 5.518 26 H 0.095 0.905 27 H 0.097 0.903 28 H 0.092 0.908 29 H 0.097 0.903 30 H 0.400 0.600 31 H -0.300 1.300 32 H -0.302 1.302 33 H 0.050 0.950 34 H 0.078 0.922 35 H 0.063 0.937 36 H 0.409 0.591 37 H 0.065 0.935 38 H 0.058 0.942 39 H 0.077 0.923 40 H 0.074 0.926 41 H 0.090 0.910 42 H 0.064 0.936 43 H 0.417 0.583 44 H 0.404 0.596 45 H 0.056 0.944 46 H 0.056 0.944 47 H 0.075 0.925 48 H 0.068 0.932 49 H 0.434 0.566 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.814 1.125 -4.386 10.808 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.028 4.028 3 C -0.207 4.207 4 C -0.135 4.135 5 O -0.373 6.373 6 Si 0.654 3.346 7 C -0.086 4.086 8 C -0.146 4.146 9 C -0.193 4.193 10 C 0.375 3.625 11 O -0.447 6.447 12 N -0.365 5.365 13 C 0.004 3.996 14 C -0.109 4.109 15 H 0.102 0.898 16 C -0.148 4.148 17 C -0.141 4.141 18 C -0.125 4.125 19 H 0.135 0.865 20 C 0.300 3.700 21 N -0.403 5.403 22 O -0.479 6.479 23 C -0.135 4.135 24 C -0.146 4.146 25 N -0.117 5.117 26 H 0.114 0.886 27 H 0.115 0.885 28 H 0.111 0.889 29 H 0.115 0.885 30 H 0.251 0.749 31 H -0.228 1.228 32 H -0.230 1.230 33 H 0.068 0.932 34 H 0.097 0.903 35 H 0.081 0.919 36 H 0.245 0.755 37 H 0.083 0.917 38 H 0.077 0.923 39 H 0.096 0.904 40 H 0.092 0.908 41 H 0.109 0.891 42 H 0.083 0.917 43 H 0.249 0.751 44 H 0.235 0.765 45 H 0.075 0.925 46 H 0.075 0.925 47 H 0.094 0.906 48 H 0.086 0.914 49 H 0.275 0.725 Dipole moment (debyes) X Y Z Total from point charges -8.112 0.273 -4.392 9.229 hybrid contribution -0.169 -1.525 -0.106 1.538 sum -8.281 -1.252 -4.499 9.507 Atomic orbital electron populations 1.20692 0.84130 1.05504 1.04950 1.20840 0.95237 0.84800 1.01966 1.18895 0.92058 0.94738 1.15026 1.23899 1.00341 0.89865 0.99371 1.86469 1.72801 1.29010 1.49001 0.95810 0.78034 0.87137 0.73660 1.20034 0.95669 0.91875 1.01052 1.20357 0.94470 0.98788 1.00953 1.19972 0.83958 0.93689 1.21702 1.17141 0.87013 0.82266 0.76057 1.90821 1.25784 1.75922 1.52158 1.45714 1.11001 1.04605 1.75211 1.21446 0.87248 0.88902 1.02037 1.21368 0.98191 0.91517 0.99848 0.89825 1.21606 1.00617 0.95684 0.96891 1.21517 0.95278 0.93775 1.03552 1.21400 0.99840 0.89942 1.01351 0.86501 1.21171 0.76479 0.90647 0.81714 1.43835 1.58502 1.17072 1.20903 1.90747 1.57989 1.62484 1.36668 1.21270 0.99831 0.96149 0.96280 1.21477 0.96959 0.93029 1.03119 1.41726 1.04053 1.09288 1.56635 0.88630 0.88466 0.88943 0.88498 0.74923 1.22814 1.22970 0.93156 0.90278 0.91855 0.75492 0.91680 0.92346 0.90402 0.90760 0.89104 0.91703 0.75117 0.76490 0.92522 0.92526 0.90630 0.91375 0.72510 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.83 9.89 71.24 0.70 1.54 16 2 C 0.09 -0.04 7.13 41.35 0.29 0.26 16 3 C -0.20 -1.09 4.49 -20.12 -0.09 -1.18 16 4 C -0.02 0.00 2.76 71.24 0.20 0.19 16 5 O -0.56 -0.56 11.56 -148.98 -1.72 -2.29 16 6 Si 0.75 0.62 31.74 68.60 2.18 2.80 16 7 C -0.08 -0.84 5.87 -19.56 -0.11 -0.95 16 8 C -0.09 -1.18 8.19 71.24 0.58 -0.59 16 9 C -0.08 -0.57 7.06 40.35 0.28 -0.29 16 10 C 0.59 4.92 7.79 86.45 0.67 5.59 16 11 O -0.57 -9.65 14.80 -4.35 -0.06 -9.72 16 12 N -0.71 0.50 5.28 -467.08 -2.47 -1.97 16 13 C 0.13 -0.12 5.07 86.38 0.44 0.32 16 14 C -0.09 0.53 2.22 -10.79 -0.02 0.51 16 15 H 0.08 -0.51 8.14 -2.39 -0.02 -0.53 16 16 C -0.11 1.00 5.08 30.60 0.16 1.16 16 17 C -0.10 0.91 5.10 30.60 0.16 1.07 16 18 C -0.10 0.46 2.52 -11.54 -0.03 0.43 16 19 H 0.12 -0.89 8.14 -2.38 -0.02 -0.91 16 20 C 0.51 0.70 7.43 87.66 0.65 1.36 16 21 N -0.84 5.17 8.77 -173.54 -1.52 3.65 16 22 O -0.60 -7.49 16.82 -3.02 -0.05 -7.54 16 23 C -0.10 0.06 4.49 30.59 0.14 0.20 16 24 C -0.11 0.41 5.20 30.59 0.16 0.57 16 25 N -0.52 0.79 5.99 -171.93 -1.03 -0.24 16 26 H 0.10 -0.95 8.14 -2.39 -0.02 -0.97 16 27 H 0.10 -0.98 7.44 -2.39 -0.02 -1.00 16 28 H 0.09 -1.16 8.14 -2.39 -0.02 -1.18 16 29 H 0.10 -0.59 6.78 -2.39 -0.02 -0.61 16 30 H 0.40 -3.87 8.74 -74.06 -0.65 -4.52 16 31 H -0.30 -2.97 5.98 99.48 0.59 -2.37 16 32 H -0.30 -2.03 7.11 99.48 0.71 -1.32 16 33 H 0.05 0.74 7.46 -2.39 -0.02 0.72 16 34 H 0.08 0.93 6.67 -2.38 -0.02 0.91 16 35 H 0.06 1.03 6.48 -2.39 -0.02 1.02 16 36 H 0.41 -3.10 6.78 -92.71 -0.63 -3.73 16 37 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 38 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 39 H 0.08 -0.87 7.18 -2.39 -0.02 -0.89 16 40 H 0.07 -0.64 8.14 -2.39 -0.02 -0.66 16 41 H 0.09 -1.15 7.56 -2.38 -0.02 -1.17 16 42 H 0.06 -0.45 8.14 -2.39 -0.02 -0.47 16 43 H 0.42 -5.38 8.25 -92.71 -0.76 -6.14 16 44 H 0.40 -2.52 8.93 -92.71 -0.83 -3.35 16 45 H 0.06 0.17 8.10 -2.38 -0.02 0.15 16 46 H 0.06 0.14 8.10 -2.38 -0.02 0.12 16 47 H 0.08 -0.35 8.14 -2.39 -0.02 -0.37 16 48 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 49 H 0.43 -4.22 8.19 -92.71 -0.76 -4.98 16 Total: 0.00 -34.20 386.41 -3.18 -37.38 By element: Atomic # 1 Polarization: -29.56 SS G_CDS: -2.68 Total: -32.24 kcal Atomic # 6 Polarization: 5.99 SS G_CDS: 4.18 Total: 10.16 kcal Atomic # 7 Polarization: 6.45 SS G_CDS: -5.02 Total: 1.43 kcal Atomic # 8 Polarization: -17.70 SS G_CDS: -1.84 Total: -19.54 kcal Atomic # 14 Polarization: 0.62 SS G_CDS: 2.18 Total: 2.80 kcal Total: -34.20 -3.18 -37.38 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11352696_12297754.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.418 kcal (2) G-P(sol) polarization free energy of solvation -34.202 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.620 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.181 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.383 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.801 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds