Wall clock time and date at job start Sat Mar 6 2021 12:56:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34775 * 1 3 3 O 1.21282 * 119.99910 * 2 1 4 4 C 1.50696 * 119.99993 * 180.02562 * 2 1 3 5 5 H 1.08996 * 109.47051 * 59.99748 * 4 2 1 6 6 C 1.53000 * 109.47118 * 179.97438 * 4 2 1 7 7 C 1.53001 * 109.47322 * 180.02562 * 6 4 2 8 8 C 1.53002 * 109.47034 * 300.00122 * 7 6 4 9 9 H 1.09010 * 109.47106 * 300.00242 * 8 7 6 10 10 C 1.52994 * 109.47465 * 179.97438 * 8 7 6 11 11 N 1.46497 * 109.47638 * 174.99865 * 10 8 7 12 12 C 1.34779 * 120.00504 * 180.02562 * 11 10 8 13 13 O 1.21592 * 119.99725 * 359.97438 * 12 11 10 14 14 C 1.47575 * 120.00141 * 179.97438 * 12 11 10 15 15 C 1.40196 * 119.83200 * 0.02562 * 14 12 11 16 16 C 1.36234 * 120.37794 * 180.02562 * 15 14 12 17 17 C 1.39869 * 119.95797 * 359.97438 * 16 15 14 18 18 C 1.46260 * 133.83893 * 179.97438 * 17 16 15 19 19 C 1.50693 * 126.48440 * 359.97438 * 18 17 16 20 20 O 1.42907 * 109.47661 * 285.00402 * 19 18 17 21 21 Si 1.86298 * 109.47618 * 165.00093 * 19 18 17 22 22 C 1.34460 * 107.03424 * 180.26520 * 18 17 16 23 23 N 1.36558 * 109.98373 * 359.57025 * 22 18 17 24 24 C 1.37825 * 109.86319 * 0.44375 * 23 22 18 25 25 C 1.38647 * 133.38876 * 179.70755 * 24 23 22 26 26 C 1.53000 * 109.47166 * 59.99782 * 8 7 6 27 27 C 1.53001 * 109.47322 * 300.00041 * 26 8 7 28 28 H 0.96996 * 120.00393 * 179.97438 * 1 2 3 29 29 H 0.97003 * 119.99906 * 359.97438 * 1 2 3 30 30 H 1.08996 * 109.47270 * 59.99998 * 6 4 2 31 31 H 1.08998 * 109.47243 * 300.00291 * 6 4 2 32 32 H 1.08991 * 109.47220 * 180.02562 * 7 6 4 33 33 H 1.08996 * 109.47046 * 59.99742 * 7 6 4 34 34 H 1.09006 * 109.47096 * 55.00021 * 10 8 7 35 35 H 1.08997 * 109.47050 * 295.00280 * 10 8 7 36 36 H 0.97002 * 120.00005 * 359.97438 * 11 10 8 37 37 H 1.07999 * 119.81400 * 0.02562 * 15 14 12 38 38 H 1.08004 * 120.01801 * 179.97438 * 16 15 14 39 39 H 1.09000 * 109.46936 * 45.00026 * 19 18 17 40 40 H 0.96697 * 114.00527 * 179.97438 * 20 19 18 41 41 H 1.48506 * 109.99834 * 298.68714 * 21 19 18 42 42 H 1.48502 * 110.00011 * 59.99978 * 21 19 18 43 43 H 1.07997 * 125.00524 * 179.73540 * 22 18 17 44 44 H 0.97001 * 125.07039 * 180.18614 * 23 22 18 45 45 H 1.08004 * 120.16119 * 0.03988 * 25 24 23 46 46 H 1.08996 * 109.47270 * 60.00162 * 26 8 7 47 47 H 1.08998 * 109.46907 * 180.02562 * 26 8 7 48 48 H 1.08996 * 109.47046 * 300.00258 * 27 26 8 49 49 H 1.09002 * 109.47417 * 180.02562 * 27 26 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9541 1.0503 0.0000 4 6 2.1012 -1.3051 -0.0006 5 1 1.8379 -1.8762 -0.8908 6 6 3.6055 -1.0255 -0.0011 7 6 4.3705 -2.3505 -0.0023 8 6 4.0015 -3.1536 1.2465 9 1 4.2652 -2.5826 2.1369 10 6 4.7660 -4.4789 1.2451 11 7 4.5053 -5.1945 2.4965 12 6 5.0778 -6.3943 2.7187 13 8 5.8104 -6.8829 1.8802 14 6 4.8156 -7.1149 3.9796 15 6 3.9699 -6.5484 4.9437 16 6 3.7206 -7.2037 6.1117 17 6 4.3096 -8.4491 6.3535 18 6 4.2576 -9.3951 7.4677 19 6 3.4775 -9.2314 8.7465 20 8 4.1352 -8.2815 9.5876 21 14 3.3734 -10.8710 9.6249 22 6 5.0428 -10.4357 7.1378 23 7 5.5850 -10.2373 5.9003 24 6 5.1606 -9.0289 5.3913 25 6 5.4088 -8.3550 4.2053 26 6 2.4972 -3.4332 1.2471 27 6 1.7322 -2.1082 1.2483 28 1 -0.4850 -0.8400 -0.0004 29 1 -0.4850 0.8401 0.0004 30 1 3.8692 -0.4541 0.8889 31 1 3.8685 -0.4537 -0.8910 32 1 5.4421 -2.1513 -0.0023 33 1 4.1068 -2.9215 -0.8925 34 1 5.8343 -4.2820 1.1550 35 1 4.4364 -5.0875 0.4030 36 1 3.9211 -4.8046 3.1656 37 1 3.5135 -5.5872 4.7593 38 1 3.0684 -6.7618 6.8506 39 1 2.4724 -8.8781 8.5163 40 1 3.6872 -8.1255 10.4302 41 1 2.6632 -11.8591 8.7735 42 1 4.7375 -11.3636 9.9444 43 1 5.2166 -11.3020 7.7589 44 1 6.1829 -10.8532 5.4485 45 1 6.0592 -8.7892 3.4604 46 1 2.2335 -4.0042 0.3569 47 1 2.2343 -4.0050 2.1370 48 1 1.9959 -1.5372 2.1385 49 1 0.6605 -2.3074 1.2491 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11352696_12335838.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 12:56:36 Heat of formation + Delta-G solvation = -62.348651 kcal Electronic energy + Delta-G solvation = -30944.206849 eV Core-core repulsion = 26644.023105 eV Total energy + Delta-G solvation = -4300.183744 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.173 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -42.48972 -41.26820 -40.63576 -38.98165 -37.81896 -37.47383 -35.82465 -34.70120 -33.36609 -32.60435 -31.81795 -30.78808 -30.57077 -27.45766 -26.44101 -24.67403 -23.88911 -23.61365 -23.21579 -21.52886 -21.23174 -20.70761 -20.58749 -19.25353 -18.54878 -18.37755 -18.24825 -17.63501 -17.39282 -16.92261 -16.64138 -16.07175 -15.76680 -15.68593 -15.49916 -15.46917 -15.18155 -15.06856 -14.96940 -14.79262 -14.73189 -14.64028 -14.41805 -13.85809 -13.81685 -13.49852 -13.33767 -13.22895 -13.00542 -12.61747 -12.57342 -12.31014 -12.17669 -12.09085 -11.92078 -11.81209 -11.53344 -11.22984 -10.88463 -10.76627 -10.75127 -10.66240 -10.24638 -10.06341 -9.36023 -8.83168 -5.06015 -0.26268 0.38881 1.25654 1.31482 1.61327 1.66784 1.86273 1.91908 2.03297 2.25710 2.52433 2.93809 3.46067 3.47475 3.50892 3.56694 3.58548 3.68832 3.78450 3.90531 3.95501 3.99050 4.07872 4.08941 4.22465 4.22776 4.32085 4.33738 4.37348 4.41083 4.45765 4.55544 4.60563 4.66052 4.70202 4.77241 4.88132 4.91885 4.97782 4.98981 5.09319 5.14422 5.23062 5.23533 5.36263 5.42019 5.42153 5.50788 5.58843 5.78770 5.97049 6.32411 6.33630 6.50911 6.68565 7.26592 7.28756 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.857 5.857 2 C 0.519 3.481 3 O -0.541 6.541 4 C -0.109 4.109 5 H 0.099 0.901 6 C -0.099 4.099 7 C -0.112 4.112 8 C -0.102 4.102 9 H 0.081 0.919 10 C 0.123 3.877 11 N -0.725 5.725 12 C 0.562 3.438 13 O -0.538 6.538 14 C -0.120 4.120 15 C -0.113 4.113 16 C -0.070 4.070 17 C -0.062 4.062 18 C -0.163 4.163 19 C -0.033 4.033 20 O -0.547 6.547 21 Si 0.684 3.316 22 C 0.072 3.928 23 N -0.583 5.583 24 C 0.083 3.917 25 C -0.056 4.056 26 C -0.114 4.114 27 C -0.110 4.110 28 H 0.401 0.599 29 H 0.401 0.599 30 H 0.072 0.928 31 H 0.073 0.927 32 H 0.072 0.928 33 H 0.068 0.932 34 H 0.071 0.929 35 H 0.071 0.929 36 H 0.400 0.600 37 H 0.126 0.874 38 H 0.131 0.869 39 H 0.071 0.929 40 H 0.379 0.621 41 H -0.256 1.256 42 H -0.254 1.254 43 H 0.170 0.830 44 H 0.422 0.578 45 H 0.137 0.863 46 H 0.070 0.930 47 H 0.067 0.933 48 H 0.070 0.930 49 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.428 -2.844 4.245 8.212 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.420 5.420 2 C 0.304 3.696 3 O -0.417 6.417 4 C -0.130 4.130 5 H 0.117 0.883 6 C -0.137 4.137 7 C -0.150 4.150 8 C -0.121 4.121 9 H 0.099 0.901 10 C 0.000 4.000 11 N -0.378 5.378 12 C 0.350 3.650 13 O -0.416 6.416 14 C -0.125 4.125 15 C -0.133 4.133 16 C -0.088 4.088 17 C -0.067 4.067 18 C -0.171 4.171 19 C -0.145 4.145 20 O -0.353 6.353 21 Si 0.585 3.415 22 C -0.057 4.057 23 N -0.185 5.185 24 C -0.024 4.024 25 C -0.077 4.077 26 C -0.152 4.152 27 C -0.148 4.148 28 H 0.230 0.770 29 H 0.232 0.768 30 H 0.091 0.909 31 H 0.092 0.908 32 H 0.091 0.909 33 H 0.087 0.913 34 H 0.089 0.911 35 H 0.089 0.911 36 H 0.237 0.763 37 H 0.144 0.856 38 H 0.149 0.851 39 H 0.089 0.911 40 H 0.226 0.774 41 H -0.180 1.180 42 H -0.178 1.178 43 H 0.187 0.813 44 H 0.260 0.740 45 H 0.155 0.845 46 H 0.089 0.911 47 H 0.086 0.914 48 H 0.089 0.911 49 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -4.617 -3.546 3.037 6.566 hybrid contribution -0.465 0.039 -0.342 0.579 sum -5.083 -3.508 2.694 6.738 Atomic orbital electron populations 1.43937 1.07390 1.12569 1.78150 1.20731 0.82611 0.91522 0.74741 1.90770 1.68200 1.33773 1.48987 1.21390 0.96962 0.93825 1.00843 0.88276 1.21341 0.91579 0.96943 1.03859 1.21527 1.00676 0.95632 0.97158 1.21469 0.95197 0.95280 1.00125 0.90082 1.21449 1.00385 0.92028 0.86146 1.45895 1.50552 1.20268 1.21065 1.18129 0.79725 0.80837 0.86281 1.90800 1.37096 1.67303 1.46428 1.19433 1.01949 0.95756 0.95317 1.20671 0.98989 0.99987 0.93672 1.20171 0.99093 0.92756 0.96828 1.19149 0.98870 0.95247 0.93475 1.19620 1.05705 0.95814 0.95958 1.23933 0.96049 1.03574 0.90921 1.86543 1.53345 1.63137 1.32259 0.95096 0.83182 0.75607 0.87623 1.21654 0.96621 1.00277 0.87151 1.41673 1.42988 1.17844 1.16026 1.18079 1.00240 0.88021 0.96030 1.20074 0.99686 0.93568 0.94404 1.21618 0.94071 0.96692 1.02807 1.21534 1.00221 0.96092 0.96946 0.77046 0.76785 0.90939 0.90818 0.90891 0.91282 0.91059 0.91085 0.76343 0.85601 0.85130 0.91108 0.77351 1.18042 1.17821 0.81319 0.73957 0.84547 0.91129 0.91409 0.91092 0.91264 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.86 2.15 8.77 31.22 0.27 2.43 16 2 C 0.52 0.40 7.43 -10.99 -0.08 0.32 16 3 O -0.54 -3.06 16.82 5.56 0.09 -2.96 16 4 C -0.11 0.19 2.52 -91.77 -0.23 -0.04 16 5 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 6 C -0.10 0.06 4.49 -26.73 -0.12 -0.06 16 7 C -0.11 0.22 5.20 -26.73 -0.14 0.08 16 8 C -0.10 0.26 2.23 -90.62 -0.20 0.06 16 9 H 0.08 -0.20 8.14 -51.92 -0.42 -0.62 16 10 C 0.12 -0.07 5.06 -4.05 -0.02 -0.09 16 11 N -0.73 0.15 5.23 -61.34 -0.32 -0.17 16 12 C 0.56 1.76 7.76 -12.45 -0.10 1.66 16 13 O -0.54 -3.68 16.31 5.28 0.09 -3.59 16 14 C -0.12 -0.28 5.87 -104.95 -0.62 -0.90 16 15 C -0.11 -0.05 9.46 -39.57 -0.37 -0.42 16 16 C -0.07 -0.09 10.03 -39.69 -0.40 -0.49 16 17 C -0.06 -0.18 6.35 -105.05 -0.67 -0.85 16 18 C -0.16 -0.35 5.60 -102.74 -0.58 -0.92 16 19 C -0.03 0.01 3.05 36.00 0.11 0.12 16 20 O -0.55 -0.02 12.86 -35.23 -0.45 -0.47 16 21 Si 0.68 -1.33 30.80 -169.99 -5.24 -6.57 16 22 C 0.07 0.08 10.43 -16.78 -0.18 -0.10 16 23 N -0.58 -0.40 6.07 -10.68 -0.06 -0.46 16 24 C 0.08 0.22 7.26 -84.00 -0.61 -0.39 16 25 C -0.06 -0.16 9.61 -39.03 -0.37 -0.53 16 26 C -0.11 0.39 5.08 -26.73 -0.14 0.26 16 27 C -0.11 0.37 5.10 -26.73 -0.14 0.23 16 28 H 0.40 -2.16 8.25 -40.82 -0.34 -2.49 16 29 H 0.40 -1.10 8.93 -40.82 -0.36 -1.46 16 30 H 0.07 0.05 8.10 -51.93 -0.42 -0.37 16 31 H 0.07 0.05 8.10 -51.93 -0.42 -0.37 16 32 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 33 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 34 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 35 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 36 H 0.40 -1.07 5.64 -40.82 -0.23 -1.30 16 37 H 0.13 -0.34 6.36 -52.49 -0.33 -0.67 16 38 H 0.13 -0.06 8.06 -52.48 -0.42 -0.49 16 39 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 40 H 0.38 -1.93 8.74 45.56 0.40 -1.53 16 41 H -0.26 -0.16 7.11 56.52 0.40 0.24 16 42 H -0.25 -0.18 7.03 56.52 0.40 0.22 16 43 H 0.17 -0.16 6.31 -52.49 -0.33 -0.49 16 44 H 0.42 -0.95 8.96 -40.82 -0.37 -1.31 16 45 H 0.14 0.35 7.62 -52.48 -0.40 -0.05 16 46 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 47 H 0.07 -0.27 7.18 -51.93 -0.37 -0.64 16 48 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 49 H 0.07 -0.32 7.57 -51.93 -0.39 -0.71 16 LS Contribution 396.45 15.07 5.97 5.97 Total: 0.00 -12.90 396.45 -11.48 -24.38 By element: Atomic # 1 Polarization: -9.50 SS G_CDS: -6.99 Total: -16.49 kcal Atomic # 6 Polarization: 2.79 SS G_CDS: -4.85 Total: -2.06 kcal Atomic # 7 Polarization: 1.90 SS G_CDS: -0.11 Total: 1.79 kcal Atomic # 8 Polarization: -6.76 SS G_CDS: -0.27 Total: -7.03 kcal Atomic # 14 Polarization: -1.33 SS G_CDS: -5.24 Total: -6.57 kcal Total LS contribution 5.97 Total: 5.97 kcal Total: -12.90 -11.48 -24.38 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11352696_12335838.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.971 kcal (2) G-P(sol) polarization free energy of solvation -12.895 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.866 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.482 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.378 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.349 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds