Wall clock time and date at job start Sat Mar 6 2021 12:57:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34779 * 1 3 3 O 1.21278 * 119.99407 * 2 1 4 4 C 1.50695 * 120.00020 * 179.97438 * 2 1 3 5 5 H 1.09003 * 109.47011 * 300.00274 * 4 2 1 6 6 C 1.53001 * 109.47471 * 60.00571 * 4 2 1 7 7 C 1.53000 * 109.47215 * 180.02562 * 6 4 2 8 8 C 1.52998 * 109.46853 * 299.99706 * 7 6 4 9 9 H 1.09000 * 109.46792 * 299.99849 * 8 7 6 10 10 C 1.52998 * 109.46900 * 180.02562 * 8 7 6 11 11 N 1.46499 * 109.47265 * 64.99862 * 10 8 7 12 12 C 1.34780 * 119.99990 * 179.97438 * 11 10 8 13 13 O 1.21558 * 119.99742 * 0.02562 * 12 11 10 14 14 C 1.47848 * 120.00156 * 180.02562 * 12 11 10 15 15 C 1.39556 * 120.13958 * 180.25174 * 14 12 11 16 16 C 1.37987 * 119.87289 * 180.24853 * 15 14 12 17 17 C 1.50699 * 119.92389 * 179.77112 * 16 15 14 18 18 O 1.42901 * 109.46830 * 299.72773 * 17 16 15 19 19 Si 1.86298 * 109.46950 * 179.73211 * 17 16 15 20 20 C 1.38319 * 120.15332 * 359.50265 * 16 15 14 21 21 C 1.38466 * 120.28642 * 0.24646 * 20 16 15 22 22 Br 1.89102 * 119.94173 * 179.97438 * 21 20 16 23 23 C 1.38034 * 120.12106 * 0.02562 * 21 20 16 24 24 C 1.52996 * 109.47141 * 60.00434 * 8 7 6 25 25 C 1.53000 * 109.46892 * 299.99541 * 24 8 7 26 26 H 0.97000 * 119.99841 * 179.97438 * 1 2 3 27 27 H 0.96996 * 120.00266 * 0.02562 * 1 2 3 28 28 H 1.09009 * 109.46711 * 299.99514 * 6 4 2 29 29 H 1.08993 * 109.47072 * 59.99100 * 6 4 2 30 30 H 1.09001 * 109.46561 * 179.97438 * 7 6 4 31 31 H 1.09003 * 109.47184 * 59.99754 * 7 6 4 32 32 H 1.09001 * 109.47013 * 304.99666 * 10 8 7 33 33 H 1.08998 * 109.47084 * 185.00092 * 10 8 7 34 34 H 0.96996 * 119.99911 * 359.97438 * 11 10 8 35 35 H 1.07994 * 120.06649 * 0.02562 * 15 14 12 36 36 H 1.08991 * 109.47351 * 59.72921 * 17 16 15 37 37 H 0.96708 * 114.00246 * 299.99864 * 18 17 16 38 38 H 1.48506 * 109.99834 * 180.02562 * 19 17 16 39 39 H 1.48502 * 110.00011 * 301.31529 * 19 17 16 40 40 H 1.08005 * 119.86043 * 180.22895 * 20 16 15 41 41 H 1.08001 * 120.08210 * 180.02562 * 23 21 20 42 42 H 1.08990 * 109.47546 * 59.99968 * 24 8 7 43 43 H 1.09000 * 109.46767 * 180.02562 * 24 8 7 44 44 H 1.09006 * 109.47014 * 180.02562 * 25 24 8 45 45 H 1.09005 * 109.47692 * 300.00151 * 25 24 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9541 1.0504 0.0000 4 6 2.1013 -1.3051 0.0006 5 1 1.8379 -1.8763 0.8908 6 6 1.7318 -2.1079 -1.2484 7 6 2.4964 -3.4332 -1.2474 8 6 4.0007 -3.1541 -1.2471 9 1 4.2644 -2.5831 -2.1373 10 6 4.7652 -4.4793 -1.2468 11 7 4.5039 -5.1942 -2.4985 12 6 5.0764 -6.3938 -2.7216 13 8 5.8092 -6.8827 -1.8840 14 6 4.8131 -7.1150 -3.9851 15 6 5.4002 -8.3597 -4.2169 16 6 5.1548 -9.0257 -5.4002 17 6 5.7923 -10.3674 -5.6539 18 8 7.2146 -10.2317 -5.6271 19 14 5.2604 -11.0020 -7.3228 20 6 4.3207 -8.4672 -6.3518 21 6 3.7306 -7.2350 -6.1264 22 35 2.5924 -6.4801 -7.4343 23 6 3.9725 -6.5561 -4.9491 24 6 4.3702 -2.3513 0.0018 25 6 3.6056 -1.0260 0.0009 26 1 -0.4850 -0.8401 -0.0004 27 1 -0.4850 0.8400 -0.0004 28 1 0.6601 -2.3072 -1.2483 29 1 1.9951 -1.5367 -2.1385 30 1 2.2327 -4.0053 -2.1369 31 1 2.2326 -4.0042 -0.3571 32 1 4.4361 -5.0885 -0.4049 33 1 5.8335 -4.2824 -1.1570 34 1 3.9189 -4.8042 -3.1667 35 1 6.0482 -8.7992 -3.4731 36 1 5.4798 -11.0700 -4.8815 37 1 7.5639 -9.6200 -6.2897 38 1 5.8819 -12.3251 -7.5847 39 1 3.7808 -11.1174 -7.3744 40 1 4.1290 -8.9943 -7.2748 41 1 3.5116 -5.5953 -4.7737 42 1 4.1065 -2.9222 0.8920 43 1 5.4418 -2.1521 0.0017 44 1 3.8692 -0.4538 0.8904 45 1 3.8694 -0.4549 -0.8894 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11352696_12335870.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 12:57:03 Heat of formation + Delta-G solvation = -94.195147 kcal Electronic energy + Delta-G solvation = -28275.241326 eV Core-core repulsion = 24111.274422 eV Total energy + Delta-G solvation = -4163.966904 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.072 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -41.65229 -41.14672 -40.06783 -38.93451 -37.74066 -35.97373 -34.74782 -33.67129 -33.49894 -32.18287 -31.83934 -30.52889 -27.79643 -27.04026 -25.13196 -23.93559 -23.35583 -22.85883 -21.63156 -21.29615 -20.73564 -19.24193 -18.55462 -18.01269 -17.68792 -17.61859 -17.28373 -16.79177 -16.42835 -16.37463 -16.07842 -15.76105 -15.57044 -15.28933 -15.17978 -15.01026 -14.80947 -14.71946 -14.36232 -14.25280 -13.82915 -13.57039 -13.39873 -13.33661 -13.05596 -13.03399 -12.37672 -12.24441 -12.23082 -12.01106 -11.97521 -11.88540 -11.60069 -11.52364 -11.29526 -11.09273 -10.79460 -10.69411 -10.65240 -10.36378 -10.14863 -9.97390 -5.17311 -0.55228 -0.23071 0.34468 1.11344 1.48246 1.56842 1.63513 1.84389 1.96757 2.46837 2.49025 3.16888 3.27391 3.36942 3.41735 3.42699 3.51827 3.70975 3.78442 3.84840 3.90257 3.91418 4.02754 4.15706 4.17390 4.20536 4.25709 4.29022 4.35435 4.41302 4.53051 4.59023 4.66162 4.67831 4.81541 4.85378 4.88194 4.92848 5.00515 5.03852 5.09097 5.17627 5.24191 5.33164 5.36577 5.75838 6.29289 6.30083 6.43297 7.05283 7.25614 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.857 5.857 2 C 0.519 3.481 3 O -0.541 6.541 4 C -0.109 4.109 5 H 0.099 0.901 6 C -0.110 4.110 7 C -0.115 4.115 8 C -0.102 4.102 9 H 0.081 0.919 10 C 0.123 3.877 11 N -0.724 5.724 12 C 0.560 3.440 13 O -0.526 6.526 14 C -0.127 4.127 15 C -0.018 4.018 16 C -0.119 4.119 17 C -0.067 4.067 18 O -0.535 6.535 19 Si 0.684 3.316 20 C -0.065 4.065 21 C -0.094 4.094 22 Br -0.033 7.033 23 C -0.055 4.055 24 C -0.112 4.112 25 C -0.099 4.099 26 H 0.401 0.599 27 H 0.402 0.598 28 H 0.069 0.931 29 H 0.071 0.929 30 H 0.066 0.934 31 H 0.070 0.930 32 H 0.073 0.927 33 H 0.074 0.926 34 H 0.400 0.600 35 H 0.149 0.851 36 H 0.121 0.879 37 H 0.381 0.619 38 H -0.248 1.248 39 H -0.253 1.253 40 H 0.142 0.858 41 H 0.138 0.862 42 H 0.069 0.931 43 H 0.073 0.927 44 H 0.074 0.926 45 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.961 -0.077 -2.937 4.932 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.420 5.420 2 C 0.304 3.696 3 O -0.417 6.417 4 C -0.130 4.130 5 H 0.117 0.883 6 C -0.148 4.148 7 C -0.152 4.152 8 C -0.121 4.121 9 H 0.099 0.901 10 C 0.000 4.000 11 N -0.377 5.377 12 C 0.346 3.654 13 O -0.403 6.403 14 C -0.131 4.131 15 C -0.037 4.037 16 C -0.120 4.120 17 C -0.178 4.178 18 O -0.340 6.340 19 Si 0.585 3.415 20 C -0.084 4.084 21 C -0.174 4.174 22 Br 0.053 6.947 23 C -0.075 4.075 24 C -0.150 4.150 25 C -0.137 4.137 26 H 0.229 0.771 27 H 0.232 0.768 28 H 0.088 0.912 29 H 0.089 0.911 30 H 0.085 0.915 31 H 0.089 0.911 32 H 0.091 0.909 33 H 0.092 0.908 34 H 0.235 0.765 35 H 0.166 0.834 36 H 0.138 0.862 37 H 0.228 0.772 38 H -0.173 1.173 39 H -0.178 1.178 40 H 0.159 0.841 41 H 0.155 0.845 42 H 0.088 0.912 43 H 0.092 0.908 44 H 0.092 0.908 45 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -3.769 -0.619 -2.755 4.709 hybrid contribution -0.839 0.094 0.582 1.026 sum -4.608 -0.525 -2.173 5.121 Atomic orbital electron populations 1.43939 1.07389 1.12581 1.78136 1.20722 0.82616 0.91509 0.74768 1.90771 1.68201 1.33755 1.48968 1.21390 0.96968 0.93852 1.00814 0.88258 1.21533 1.00243 0.96039 0.96992 1.21621 0.94067 0.96762 1.02764 1.21472 0.95180 0.95203 1.00236 0.90053 1.21494 1.00574 0.92111 0.85868 1.45925 1.50306 1.20203 1.21278 1.18093 0.80134 0.80992 0.86142 1.90835 1.36534 1.66982 1.45940 1.19972 1.01178 0.96804 0.95143 1.21302 0.94633 0.91831 0.95915 1.20386 0.98967 0.98136 0.94532 1.25082 0.84646 0.95679 1.12391 1.86551 1.17644 1.68396 1.61414 0.94816 0.81160 0.84539 0.80960 1.21222 0.94782 0.93533 0.98902 1.21645 1.02151 0.97596 0.95971 1.96848 1.62664 1.83174 1.52013 1.21271 0.95658 0.99169 0.91411 1.21524 1.00721 0.95647 0.97085 1.21344 0.91566 0.96917 1.03909 0.77051 0.76763 0.91242 0.91068 0.91526 0.91079 0.90895 0.90817 0.76458 0.83360 0.86177 0.77164 1.17269 1.17798 0.84101 0.84461 0.91238 0.90834 0.90760 0.90928 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.86 2.38 8.77 31.22 0.27 2.66 16 2 C 0.52 0.22 7.43 -10.99 -0.08 0.14 16 3 O -0.54 -2.87 16.82 5.56 0.09 -2.78 16 4 C -0.11 0.24 2.52 -91.77 -0.23 0.01 16 5 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 6 C -0.11 0.42 5.10 -26.73 -0.14 0.28 16 7 C -0.11 0.47 5.08 -26.73 -0.14 0.34 16 8 C -0.10 0.34 2.22 -90.62 -0.20 0.14 16 9 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 10 C 0.12 -0.21 5.07 -4.04 -0.02 -0.23 16 11 N -0.72 1.15 5.23 -61.25 -0.32 0.83 16 12 C 0.56 0.80 7.77 -12.33 -0.10 0.71 16 13 O -0.53 -2.83 16.35 5.31 0.09 -2.75 16 14 C -0.13 -0.01 5.87 -104.97 -0.62 -0.63 16 15 C -0.02 -0.01 9.16 -39.18 -0.36 -0.37 16 16 C -0.12 0.11 5.38 -104.68 -0.56 -0.46 16 17 C -0.07 0.08 2.82 36.01 0.10 0.18 16 18 O -0.53 0.29 12.77 -35.23 -0.45 -0.16 16 19 Si 0.68 -1.36 29.78 -169.99 -5.06 -6.42 16 20 C -0.06 0.09 8.41 -39.47 -0.33 -0.24 16 21 C -0.09 0.11 6.22 -39.57 -0.25 -0.13 16 22 Br -0.03 0.04 33.69 -68.01 -2.29 -2.25 16 23 C -0.05 0.09 9.28 -39.16 -0.36 -0.27 16 24 C -0.11 0.30 5.20 -26.73 -0.14 0.16 16 25 C -0.10 0.11 4.49 -26.73 -0.12 -0.01 16 26 H 0.40 -2.26 8.25 -40.82 -0.34 -2.60 16 27 H 0.40 -1.19 8.93 -40.82 -0.36 -1.55 16 28 H 0.07 -0.35 7.56 -51.92 -0.39 -0.74 16 29 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 30 H 0.07 -0.31 7.18 -51.93 -0.37 -0.69 16 31 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 32 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 33 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 34 H 0.40 -1.59 5.69 -40.82 -0.23 -1.83 16 35 H 0.15 0.23 7.65 -52.49 -0.40 -0.17 16 36 H 0.12 -0.11 7.96 -51.93 -0.41 -0.52 16 37 H 0.38 -1.70 8.70 45.56 0.40 -1.30 16 38 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 39 H -0.25 -0.03 7.11 56.52 0.40 0.37 16 40 H 0.14 -0.40 4.86 -52.48 -0.26 -0.65 16 41 H 0.14 -0.54 6.41 -52.49 -0.34 -0.88 16 42 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 43 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 44 H 0.07 0.01 8.10 -51.93 -0.42 -0.41 16 45 H 0.07 0.01 8.10 -51.93 -0.42 -0.41 16 LS Contribution 384.17 15.07 5.79 5.79 Total: 0.00 -10.16 384.17 -11.55 -21.71 By element: Atomic # 1 Polarization: -10.13 SS G_CDS: -6.13 Total: -16.26 kcal Atomic # 6 Polarization: 3.17 SS G_CDS: -3.54 Total: -0.37 kcal Atomic # 7 Polarization: 3.53 SS G_CDS: -0.05 Total: 3.49 kcal Atomic # 8 Polarization: -5.42 SS G_CDS: -0.27 Total: -5.69 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: -5.06 Total: -6.42 kcal Atomic # 35 Polarization: 0.04 SS G_CDS: -2.29 Total: -2.25 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -10.16 -11.55 -21.71 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11352696_12335870.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.484 kcal (2) G-P(sol) polarization free energy of solvation -10.160 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.644 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.551 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.711 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.195 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds