Wall clock time and date at job start Sat Mar 6 2021 12:57:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34779 * 1 3 3 O 1.21278 * 119.99407 * 2 1 4 4 C 1.50695 * 120.00020 * 179.97438 * 2 1 3 5 5 H 1.09003 * 109.47011 * 300.00274 * 4 2 1 6 6 C 1.53001 * 109.47471 * 60.00571 * 4 2 1 7 7 C 1.53000 * 109.47215 * 180.02562 * 6 4 2 8 8 C 1.52998 * 109.46853 * 299.99706 * 7 6 4 9 9 H 1.09000 * 109.46792 * 299.99849 * 8 7 6 10 10 C 1.52998 * 109.46900 * 180.02562 * 8 7 6 11 11 N 1.46499 * 109.47265 * 64.99862 * 10 8 7 12 12 C 1.34780 * 119.99990 * 179.97438 * 11 10 8 13 13 O 1.21558 * 119.99742 * 0.02562 * 12 11 10 14 14 C 1.47848 * 120.00156 * 180.02562 * 12 11 10 15 15 C 1.39556 * 120.13958 * 180.25174 * 14 12 11 16 16 C 1.37987 * 119.87289 * 180.24853 * 15 14 12 17 17 C 1.50699 * 119.92389 * 179.77112 * 16 15 14 18 18 O 1.42901 * 109.46830 * 299.72773 * 17 16 15 19 19 Si 1.86298 * 109.46950 * 179.73211 * 17 16 15 20 20 C 1.38319 * 120.15332 * 359.50265 * 16 15 14 21 21 C 1.38466 * 120.28642 * 0.24646 * 20 16 15 22 22 Br 1.89102 * 119.94173 * 179.97438 * 21 20 16 23 23 C 1.38034 * 120.12106 * 0.02562 * 21 20 16 24 24 C 1.52996 * 109.47141 * 60.00434 * 8 7 6 25 25 C 1.53000 * 109.46892 * 299.99541 * 24 8 7 26 26 H 0.97000 * 119.99841 * 179.97438 * 1 2 3 27 27 H 0.96996 * 120.00266 * 0.02562 * 1 2 3 28 28 H 1.09009 * 109.46711 * 299.99514 * 6 4 2 29 29 H 1.08993 * 109.47072 * 59.99100 * 6 4 2 30 30 H 1.09001 * 109.46561 * 179.97438 * 7 6 4 31 31 H 1.09003 * 109.47184 * 59.99754 * 7 6 4 32 32 H 1.09001 * 109.47013 * 304.99666 * 10 8 7 33 33 H 1.08998 * 109.47084 * 185.00092 * 10 8 7 34 34 H 0.96996 * 119.99911 * 359.97438 * 11 10 8 35 35 H 1.07994 * 120.06649 * 0.02562 * 15 14 12 36 36 H 1.08991 * 109.47351 * 59.72921 * 17 16 15 37 37 H 0.96708 * 114.00246 * 299.99864 * 18 17 16 38 38 H 1.48506 * 109.99834 * 180.02562 * 19 17 16 39 39 H 1.48502 * 110.00011 * 301.31529 * 19 17 16 40 40 H 1.08005 * 119.86043 * 180.22895 * 20 16 15 41 41 H 1.08001 * 120.08210 * 180.02562 * 23 21 20 42 42 H 1.08990 * 109.47546 * 59.99968 * 24 8 7 43 43 H 1.09000 * 109.46767 * 180.02562 * 24 8 7 44 44 H 1.09006 * 109.47014 * 180.02562 * 25 24 8 45 45 H 1.09005 * 109.47692 * 300.00151 * 25 24 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9541 1.0504 0.0000 4 6 2.1013 -1.3051 0.0006 5 1 1.8379 -1.8763 0.8908 6 6 1.7318 -2.1079 -1.2484 7 6 2.4964 -3.4332 -1.2474 8 6 4.0007 -3.1541 -1.2471 9 1 4.2644 -2.5831 -2.1373 10 6 4.7652 -4.4793 -1.2468 11 7 4.5039 -5.1942 -2.4985 12 6 5.0764 -6.3938 -2.7216 13 8 5.8092 -6.8827 -1.8840 14 6 4.8131 -7.1150 -3.9851 15 6 5.4002 -8.3597 -4.2169 16 6 5.1548 -9.0257 -5.4002 17 6 5.7923 -10.3674 -5.6539 18 8 7.2146 -10.2317 -5.6271 19 14 5.2604 -11.0020 -7.3228 20 6 4.3207 -8.4672 -6.3518 21 6 3.7306 -7.2350 -6.1264 22 35 2.5924 -6.4801 -7.4343 23 6 3.9725 -6.5561 -4.9491 24 6 4.3702 -2.3513 0.0018 25 6 3.6056 -1.0260 0.0009 26 1 -0.4850 -0.8401 -0.0004 27 1 -0.4850 0.8400 -0.0004 28 1 0.6601 -2.3072 -1.2483 29 1 1.9951 -1.5367 -2.1385 30 1 2.2327 -4.0053 -2.1369 31 1 2.2326 -4.0042 -0.3571 32 1 4.4361 -5.0885 -0.4049 33 1 5.8335 -4.2824 -1.1570 34 1 3.9189 -4.8042 -3.1667 35 1 6.0482 -8.7992 -3.4731 36 1 5.4798 -11.0700 -4.8815 37 1 7.5639 -9.6200 -6.2897 38 1 5.8819 -12.3251 -7.5847 39 1 3.7808 -11.1174 -7.3744 40 1 4.1290 -8.9943 -7.2748 41 1 3.5116 -5.5953 -4.7737 42 1 4.1065 -2.9222 0.8920 43 1 5.4418 -2.1521 0.0017 44 1 3.8692 -0.4538 0.8904 45 1 3.8694 -0.4549 -0.8894 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11352696_12335870.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 12:57:02 Heat of formation + Delta-G solvation = -96.898857 kcal Electronic energy + Delta-G solvation = -28275.358568 eV Core-core repulsion = 24111.274422 eV Total energy + Delta-G solvation = -4164.084146 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.072 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -41.64040 -41.09490 -40.06865 -38.89148 -37.67646 -35.99807 -34.72639 -33.59979 -33.43619 -32.04912 -31.64313 -30.44157 -27.71326 -26.95736 -25.08465 -23.71156 -23.27849 -22.79141 -21.56765 -21.21477 -20.59552 -19.18620 -18.43233 -17.94218 -17.66701 -17.56815 -17.24468 -16.73121 -16.35550 -16.32377 -16.06186 -15.72804 -15.49730 -15.18406 -15.02990 -14.95505 -14.79036 -14.66125 -14.32116 -14.16765 -13.76588 -13.45964 -13.25260 -13.17760 -13.01616 -12.90365 -12.19933 -12.19206 -12.06175 -11.95817 -11.93673 -11.77253 -11.48458 -11.38582 -11.20623 -11.04373 -10.81227 -10.64599 -10.59012 -10.35429 -10.08842 -9.89894 -5.04856 -0.50802 -0.15446 0.44065 1.21806 1.52640 1.59872 1.63685 1.91598 2.00892 2.47987 2.62350 3.27645 3.37310 3.53808 3.59229 3.63855 3.73075 3.82262 3.88418 3.96758 4.00371 4.10431 4.20446 4.24094 4.29661 4.41115 4.46686 4.47571 4.49512 4.56318 4.67876 4.76059 4.76701 4.86544 4.93858 5.01915 5.08991 5.11844 5.15707 5.20404 5.26945 5.29395 5.36197 5.39643 5.52871 5.88829 6.36590 6.46728 6.71517 7.04275 7.35108 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.840 5.840 2 C 0.513 3.487 3 O -0.599 6.599 4 C -0.104 4.104 5 H 0.117 0.883 6 C -0.105 4.105 7 C -0.112 4.112 8 C -0.092 4.092 9 H 0.085 0.915 10 C 0.125 3.875 11 N -0.708 5.708 12 C 0.558 3.442 13 O -0.575 6.575 14 C -0.135 4.135 15 C -0.030 4.030 16 C -0.116 4.116 17 C -0.075 4.075 18 O -0.553 6.553 19 Si 0.771 3.229 20 C -0.062 4.062 21 C -0.098 4.098 22 Br -0.028 7.028 23 C -0.044 4.044 24 C -0.108 4.108 25 C -0.098 4.098 26 H 0.417 0.583 27 H 0.404 0.596 28 H 0.090 0.910 29 H 0.064 0.936 30 H 0.080 0.920 31 H 0.075 0.925 32 H 0.066 0.934 33 H 0.060 0.940 34 H 0.414 0.586 35 H 0.130 0.870 36 H 0.113 0.887 37 H 0.397 0.603 38 H -0.295 1.295 39 H -0.275 1.275 40 H 0.156 0.844 41 H 0.163 0.837 42 H 0.075 0.925 43 H 0.068 0.932 44 H 0.055 0.945 45 H 0.056 0.944 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.650 -0.152 -4.079 6.971 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.403 5.403 2 C 0.299 3.701 3 O -0.480 6.480 4 C -0.125 4.125 5 H 0.135 0.865 6 C -0.142 4.142 7 C -0.149 4.149 8 C -0.111 4.111 9 H 0.103 0.897 10 C 0.001 3.999 11 N -0.360 5.360 12 C 0.345 3.655 13 O -0.455 6.455 14 C -0.139 4.139 15 C -0.050 4.050 16 C -0.117 4.117 17 C -0.185 4.185 18 O -0.361 6.361 19 Si 0.676 3.324 20 C -0.081 4.081 21 C -0.178 4.178 22 Br 0.058 6.942 23 C -0.064 4.064 24 C -0.146 4.146 25 C -0.136 4.136 26 H 0.249 0.751 27 H 0.234 0.766 28 H 0.108 0.892 29 H 0.083 0.917 30 H 0.099 0.901 31 H 0.093 0.907 32 H 0.085 0.915 33 H 0.079 0.921 34 H 0.252 0.748 35 H 0.148 0.852 36 H 0.130 0.870 37 H 0.247 0.753 38 H -0.222 1.222 39 H -0.202 1.202 40 H 0.173 0.827 41 H 0.180 0.820 42 H 0.094 0.906 43 H 0.087 0.913 44 H 0.073 0.927 45 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -5.516 -0.666 -3.911 6.795 hybrid contribution -0.338 0.110 0.946 1.011 sum -5.854 -0.557 -2.965 6.586 Atomic orbital electron populations 1.43841 1.06539 1.13667 1.76298 1.21209 0.83425 0.91603 0.73823 1.90745 1.69482 1.35796 1.51943 1.21402 0.95628 0.92890 1.02573 0.86509 1.21523 1.01521 0.95599 0.95590 1.21623 0.92910 0.96720 1.03678 1.21379 0.95833 0.93941 0.99929 0.89691 1.21467 1.00105 0.92702 0.85578 1.45821 1.49476 1.19170 1.21535 1.18340 0.79576 0.81475 0.86082 1.90810 1.38865 1.68306 1.47545 1.19874 1.02118 0.96766 0.95124 1.21250 0.95053 0.92485 0.96210 1.20330 0.99121 0.98079 0.94185 1.25251 0.84522 0.95581 1.13118 1.86512 1.17988 1.69119 1.62501 0.93830 0.78096 0.81638 0.78815 1.21380 0.94079 0.93562 0.99116 1.21739 1.02196 0.97684 0.96174 1.96864 1.62470 1.83060 1.51807 1.21451 0.94598 0.99821 0.90553 1.21474 1.00260 0.94994 0.97827 1.21276 0.92914 0.97168 1.02223 0.75115 0.76550 0.89194 0.91733 0.90141 0.90660 0.91529 0.92136 0.74798 0.85241 0.86962 0.75289 1.22218 1.20176 0.82667 0.82000 0.90639 0.91335 0.92657 0.92540 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 5.30 8.77 -173.54 -1.52 3.78 16 2 C 0.51 0.56 7.43 87.66 0.65 1.21 16 3 O -0.60 -7.34 16.82 -3.02 -0.05 -7.39 16 4 C -0.10 0.51 2.52 -11.54 -0.03 0.48 16 5 H 0.12 -0.96 8.14 -2.39 -0.02 -0.98 16 6 C -0.10 0.97 5.10 30.59 0.16 1.13 16 7 C -0.11 1.13 5.08 30.59 0.16 1.29 16 8 C -0.09 0.68 2.22 -10.80 -0.02 0.65 16 9 H 0.08 -0.64 8.14 -2.39 -0.02 -0.66 16 10 C 0.12 -0.41 5.07 86.38 0.44 0.03 16 11 N -0.71 2.56 5.23 -465.96 -2.44 0.12 16 12 C 0.56 1.94 7.77 86.79 0.67 2.61 16 13 O -0.57 -7.26 16.35 -3.90 -0.06 -7.32 16 14 C -0.13 -0.04 5.87 -20.09 -0.12 -0.16 16 15 C -0.03 -0.06 9.16 22.53 0.21 0.15 16 16 C -0.12 0.19 5.38 -19.91 -0.11 0.08 16 17 C -0.08 0.14 2.82 71.24 0.20 0.34 16 18 O -0.55 0.25 12.77 -148.98 -1.90 -1.65 16 19 Si 0.77 -3.16 29.78 68.60 2.04 -1.12 16 20 C -0.06 0.24 8.41 22.34 0.19 0.42 16 21 C -0.10 0.37 6.22 22.28 0.14 0.51 16 22 Br -0.03 0.11 33.69 -20.37 -0.69 -0.57 16 23 C -0.04 0.20 9.28 22.55 0.21 0.41 16 24 C -0.11 0.54 5.20 30.59 0.16 0.70 16 25 C -0.10 0.13 4.49 30.59 0.14 0.27 16 26 H 0.42 -5.45 8.25 -92.71 -0.76 -6.21 16 27 H 0.40 -2.55 8.93 -92.71 -0.83 -3.38 16 28 H 0.09 -1.16 7.56 -2.38 -0.02 -1.18 16 29 H 0.06 -0.46 8.14 -2.39 -0.02 -0.48 16 30 H 0.08 -0.98 7.18 -2.39 -0.02 -1.00 16 31 H 0.07 -0.75 8.14 -2.39 -0.02 -0.77 16 32 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 33 H 0.06 -0.01 8.14 -2.39 -0.02 -0.03 16 34 H 0.41 -3.97 5.69 -92.71 -0.53 -4.50 16 35 H 0.13 0.73 7.65 -2.91 -0.02 0.70 16 36 H 0.11 -0.07 7.96 -2.39 -0.02 -0.09 16 37 H 0.40 -3.50 8.70 -74.05 -0.64 -4.14 16 38 H -0.29 -1.08 7.11 99.48 0.71 -0.38 16 39 H -0.28 0.10 7.11 99.48 0.71 0.81 16 40 H 0.16 -1.10 4.86 -2.91 -0.01 -1.11 16 41 H 0.16 -1.67 6.41 -2.91 -0.02 -1.69 16 42 H 0.07 -0.45 8.14 -2.39 -0.02 -0.47 16 43 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 44 H 0.05 0.13 8.10 -2.38 -0.02 0.11 16 45 H 0.06 0.11 8.10 -2.38 -0.02 0.09 16 Total: 0.00 -26.55 384.17 -3.24 -29.79 By element: Atomic # 1 Polarization: -24.11 SS G_CDS: -1.65 Total: -25.76 kcal Atomic # 6 Polarization: 7.09 SS G_CDS: 3.04 Total: 10.12 kcal Atomic # 7 Polarization: 7.86 SS G_CDS: -3.96 Total: 3.90 kcal Atomic # 8 Polarization: -14.34 SS G_CDS: -2.02 Total: -16.36 kcal Atomic # 14 Polarization: -3.16 SS G_CDS: 2.04 Total: -1.12 kcal Atomic # 35 Polarization: 0.11 SS G_CDS: -0.69 Total: -0.57 kcal Total: -26.55 -3.24 -29.79 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11352696_12335870.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.112 kcal (2) G-P(sol) polarization free energy of solvation -26.548 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.660 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.239 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.787 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.899 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds