Wall clock time and date at job start Sat Mar 6 2021 12:58:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34770 * 1 3 3 O 1.21281 * 120.00244 * 2 1 4 4 C 1.50703 * 119.99761 * 180.02562 * 2 1 3 5 5 H 1.09002 * 109.47152 * 59.99841 * 4 2 1 6 6 C 1.53005 * 109.47304 * 179.97438 * 4 2 1 7 7 C 1.52997 * 109.47452 * 180.02562 * 6 4 2 8 8 C 1.53002 * 109.46817 * 300.00239 * 7 6 4 9 9 H 1.08992 * 109.47063 * 299.99823 * 8 7 6 10 10 C 1.53001 * 109.46637 * 179.97438 * 8 7 6 11 11 N 1.46500 * 109.47094 * 65.00239 * 10 8 7 12 12 C 1.34777 * 120.00297 * 179.97438 * 11 10 8 13 13 O 1.21594 * 119.99804 * 0.02562 * 12 11 10 14 14 C 1.47537 * 120.00397 * 179.97438 * 12 11 10 15 15 C 1.39669 * 120.18926 * 0.02562 * 14 12 11 16 16 C 1.37827 * 119.90690 * 180.02562 * 15 14 12 17 17 C 1.38501 * 120.29783 * 0.02562 * 16 15 14 18 18 C 1.50705 * 119.80162 * 179.97438 * 17 16 15 19 19 O 1.42896 * 109.47386 * 244.99513 * 18 17 16 20 20 Si 1.86299 * 109.47097 * 5.00026 * 18 17 16 21 21 C 1.38101 * 120.39506 * 0.02562 * 17 16 15 22 22 C 1.38667 * 120.07971 * 359.67857 * 21 17 16 23 23 O 1.35651 * 120.15102 * 180.32311 * 22 21 17 24 24 C 1.53000 * 109.47233 * 60.00194 * 8 7 6 25 25 C 1.52997 * 109.47060 * 299.99657 * 24 8 7 26 26 H 0.97006 * 120.00451 * 179.97438 * 1 2 3 27 27 H 0.97001 * 120.00051 * 359.97438 * 1 2 3 28 28 H 1.09002 * 109.46935 * 59.99966 * 6 4 2 29 29 H 1.09001 * 109.46812 * 300.00308 * 6 4 2 30 30 H 1.08993 * 109.47194 * 179.97438 * 7 6 4 31 31 H 1.09002 * 109.46695 * 59.99734 * 7 6 4 32 32 H 1.09008 * 109.46864 * 185.00001 * 10 8 7 33 33 H 1.09000 * 109.47679 * 305.00033 * 10 8 7 34 34 H 0.97004 * 120.00359 * 359.97438 * 11 10 8 35 35 H 1.07997 * 120.04683 * 359.97438 * 15 14 12 36 36 H 1.08005 * 119.85198 * 180.02562 * 16 15 14 37 37 H 1.09006 * 109.46753 * 124.99568 * 18 17 16 38 38 H 0.96706 * 113.99589 * 60.00584 * 19 18 17 39 39 H 1.48502 * 109.99847 * 179.97438 * 20 18 17 40 40 H 1.48490 * 110.00128 * 301.31646 * 20 18 17 41 41 H 1.07998 * 119.95766 * 179.97438 * 21 17 16 42 42 H 0.96704 * 113.99852 * 270.27949 * 23 22 21 43 43 H 1.09002 * 109.47398 * 59.99826 * 24 8 7 44 44 H 1.09001 * 109.47194 * 180.02562 * 24 8 7 45 45 H 1.08996 * 109.47853 * 180.02562 * 25 24 8 46 46 H 1.09002 * 109.47153 * 300.00319 * 25 24 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1012 -1.3052 -0.0006 5 1 1.8378 -1.8763 -0.8908 6 6 3.6055 -1.0257 -0.0011 7 6 4.3704 -2.3507 -0.0023 8 6 4.0013 -3.1538 1.2466 9 1 4.2650 -2.5828 2.1367 10 6 4.7658 -4.4791 1.2449 11 7 6.2018 -4.2146 1.3646 12 6 7.0764 -5.2398 1.3852 13 8 6.6737 -6.3843 1.3039 14 6 8.5226 -4.9735 1.5051 15 6 8.9896 -3.6605 1.5982 16 6 10.3419 -3.4184 1.7095 17 6 11.2410 -4.4716 1.7291 18 6 12.7173 -4.1940 1.8506 19 8 13.3804 -4.6112 0.6556 20 14 12.9869 -2.3683 2.1056 21 6 10.7929 -5.7747 1.6368 22 6 9.4355 -6.0369 1.5304 23 8 8.9933 -7.3166 1.4463 24 6 2.4970 -3.4334 1.2470 25 6 1.7321 -2.1083 1.2482 26 1 -0.4851 -0.8401 -0.0004 27 1 -0.4850 0.8401 0.0004 28 1 3.8692 -0.4543 0.8889 29 1 3.8684 -0.4539 -0.8911 30 1 5.4420 -2.1516 -0.0032 31 1 4.1066 -2.9216 -0.8926 32 1 4.4373 -5.0890 2.0866 33 1 4.5706 -5.0101 0.3133 34 1 6.5231 -3.3017 1.4291 35 1 8.2921 -2.8361 1.5821 36 1 10.7020 -2.4027 1.7818 37 1 13.1214 -4.7432 2.7011 38 1 13.0706 -4.1627 -0.1432 39 1 14.4389 -2.0816 2.2275 40 1 12.4120 -1.6063 0.9681 41 1 11.5003 -6.5906 1.6523 42 1 8.9311 -7.6526 0.5416 43 1 2.2333 -4.0043 0.3567 44 1 2.2340 -4.0051 2.1370 45 1 0.6604 -2.3074 1.2490 46 1 1.9958 -1.5374 2.1385 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11352696_13422076.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 12:58:37 Heat of formation + Delta-G solvation = -136.420873 kcal Electronic energy + Delta-G solvation = -28618.714747 eV Core-core repulsion = 24474.052609 eV Total energy + Delta-G solvation = -4144.662138 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.161 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -41.66770 -41.16927 -40.01973 -38.95159 -38.39123 -37.22730 -35.79085 -34.71194 -33.29488 -32.11449 -31.77583 -31.12386 -28.14280 -26.78318 -24.03153 -23.96729 -23.84261 -22.98455 -21.59732 -21.35976 -20.76866 -19.49611 -18.74142 -18.52582 -18.30401 -17.64026 -17.36421 -16.80840 -16.50524 -16.34730 -16.24283 -16.02523 -15.85306 -15.56025 -15.36212 -15.20789 -15.02464 -14.83891 -14.72258 -14.29264 -13.80860 -13.76409 -13.56833 -13.33611 -13.28853 -13.09805 -12.99017 -12.41398 -12.30433 -12.24856 -12.09759 -11.86570 -11.62379 -11.57918 -11.26833 -10.87947 -10.79326 -10.69786 -10.63940 -10.20797 -10.03416 -9.80258 -5.05277 -0.41692 0.09091 1.15172 1.49039 1.63119 1.77025 1.87572 2.08141 2.48836 2.58281 3.06920 3.28563 3.39482 3.43307 3.45730 3.51675 3.61199 3.70238 3.86790 3.91930 3.99737 4.01003 4.17987 4.19761 4.26625 4.30895 4.34040 4.35829 4.53232 4.55684 4.64305 4.67489 4.69307 4.81730 4.90357 4.94106 4.95287 5.03871 5.05808 5.11046 5.17308 5.18284 5.30376 5.40325 5.51614 5.75528 6.27235 6.29210 6.43892 6.70097 7.22350 7.25178 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.857 5.857 2 C 0.519 3.481 3 O -0.542 6.542 4 C -0.109 4.109 5 H 0.099 0.901 6 C -0.100 4.100 7 C -0.116 4.116 8 C -0.102 4.102 9 H 0.081 0.919 10 C 0.125 3.875 11 N -0.728 5.728 12 C 0.558 3.442 13 O -0.518 6.518 14 C -0.163 4.163 15 C -0.065 4.065 16 C -0.137 4.137 17 C -0.074 4.074 18 C -0.081 4.081 19 O -0.526 6.526 20 Si 0.691 3.309 21 C -0.129 4.129 22 C 0.172 3.828 23 O -0.476 6.476 24 C -0.110 4.110 25 C -0.109 4.109 26 H 0.401 0.599 27 H 0.402 0.598 28 H 0.072 0.928 29 H 0.072 0.928 30 H 0.066 0.934 31 H 0.068 0.932 32 H 0.071 0.929 33 H 0.070 0.930 34 H 0.399 0.601 35 H 0.133 0.867 36 H 0.136 0.864 37 H 0.123 0.877 38 H 0.377 0.623 39 H -0.255 1.255 40 H -0.258 1.258 41 H 0.140 0.860 42 H 0.398 0.602 43 H 0.071 0.929 44 H 0.073 0.927 45 H 0.070 0.930 46 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.288 1.881 0.056 3.788 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.420 5.420 2 C 0.304 3.696 3 O -0.418 6.418 4 C -0.130 4.130 5 H 0.117 0.883 6 C -0.138 4.138 7 C -0.153 4.153 8 C -0.121 4.121 9 H 0.099 0.901 10 C 0.001 3.999 11 N -0.381 5.381 12 C 0.345 3.655 13 O -0.395 6.395 14 C -0.167 4.167 15 C -0.084 4.084 16 C -0.155 4.155 17 C -0.075 4.075 18 C -0.191 4.191 19 O -0.333 6.333 20 Si 0.591 3.409 21 C -0.147 4.147 22 C 0.126 3.874 23 O -0.287 6.287 24 C -0.148 4.148 25 C -0.147 4.147 26 H 0.230 0.770 27 H 0.232 0.768 28 H 0.090 0.910 29 H 0.091 0.909 30 H 0.085 0.915 31 H 0.086 0.914 32 H 0.089 0.911 33 H 0.089 0.911 34 H 0.235 0.765 35 H 0.151 0.849 36 H 0.154 0.846 37 H 0.141 0.859 38 H 0.225 0.775 39 H -0.180 1.180 40 H -0.183 1.183 41 H 0.158 0.842 42 H 0.256 0.744 43 H 0.089 0.911 44 H 0.092 0.908 45 H 0.089 0.911 46 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -2.387 1.988 0.702 3.185 hybrid contribution -0.447 -0.040 -1.612 1.674 sum -2.835 1.948 -0.910 3.558 Atomic orbital electron populations 1.43939 1.07390 1.12610 1.78080 1.20723 0.82627 0.91500 0.74735 1.90767 1.68207 1.33779 1.49063 1.21393 0.96884 0.93868 1.00898 0.88272 1.21354 0.91746 0.96956 1.03759 1.21648 1.00055 0.95882 0.97732 1.21467 0.95611 0.95477 0.99526 0.90093 1.21433 0.78875 0.96920 1.02644 1.45928 1.07105 1.09422 1.75686 1.18035 0.85485 0.85078 0.76944 1.90840 1.79532 1.20820 1.48263 1.20435 0.93663 0.94039 1.08572 1.21144 0.95744 0.95069 0.96445 1.20998 0.93070 0.98880 1.02511 1.20376 0.96217 0.93186 0.97735 1.25157 0.89347 1.13603 0.90950 1.86636 1.63578 1.66380 1.16668 0.94849 0.82599 0.73823 0.89595 1.21355 0.94506 0.97214 1.01647 1.18507 0.90107 0.84069 0.94753 1.84762 1.87581 1.23495 1.32890 1.21488 0.93261 0.96916 1.03145 1.21521 1.00297 0.96016 0.96880 0.77005 0.76760 0.90953 0.90942 0.91540 0.91351 0.91086 0.91132 0.76541 0.84890 0.84646 0.85933 0.77538 1.18000 1.18266 0.84200 0.74382 0.91067 0.90840 0.91130 0.91063 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.86 2.40 8.77 31.22 0.27 2.68 16 2 C 0.52 0.18 7.43 -10.99 -0.08 0.10 16 3 O -0.54 -2.78 16.82 5.56 0.09 -2.69 16 4 C -0.11 0.25 2.52 -91.77 -0.23 0.02 16 5 H 0.10 -0.34 8.14 -51.93 -0.42 -0.77 16 6 C -0.10 0.15 4.49 -26.73 -0.12 0.03 16 7 C -0.12 0.35 5.08 -26.73 -0.14 0.22 16 8 C -0.10 0.33 2.23 -90.62 -0.20 0.13 16 9 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 10 C 0.12 -0.17 5.06 -4.04 -0.02 -0.19 16 11 N -0.73 0.72 5.23 -61.34 -0.32 0.40 16 12 C 0.56 1.25 7.76 -12.47 -0.10 1.15 16 13 O -0.52 -3.10 15.16 -16.59 -0.25 -3.36 16 14 C -0.16 -0.16 5.89 -104.85 -0.62 -0.78 16 15 C -0.07 0.11 9.54 -39.20 -0.37 -0.26 16 16 C -0.14 0.26 8.64 -39.63 -0.34 -0.08 16 17 C -0.07 0.06 5.36 -104.57 -0.56 -0.50 16 18 C -0.08 0.10 2.79 36.01 0.10 0.20 16 19 O -0.53 -0.11 12.83 -35.23 -0.45 -0.56 16 20 Si 0.69 -1.46 29.86 -169.99 -5.08 -6.54 16 21 C -0.13 -0.06 9.60 -39.47 -0.38 -0.44 16 22 C 0.17 0.31 6.72 -38.70 -0.26 0.05 16 23 O -0.48 -1.31 11.58 -40.53 -0.47 -1.78 16 24 C -0.11 0.41 5.20 -26.73 -0.14 0.27 16 25 C -0.11 0.39 5.10 -26.73 -0.14 0.26 16 26 H 0.40 -2.26 8.25 -40.82 -0.34 -2.60 16 27 H 0.40 -1.21 8.93 -40.82 -0.36 -1.57 16 28 H 0.07 -0.03 8.10 -51.93 -0.42 -0.45 16 29 H 0.07 -0.01 8.10 -51.93 -0.42 -0.43 16 30 H 0.07 -0.23 7.18 -51.93 -0.37 -0.60 16 31 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 32 H 0.07 -0.02 8.14 -51.92 -0.42 -0.44 16 33 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 34 H 0.40 -1.37 5.68 -40.82 -0.23 -1.60 16 35 H 0.13 -0.61 6.40 -52.49 -0.34 -0.94 16 36 H 0.14 -0.51 4.81 -52.48 -0.25 -0.76 16 37 H 0.12 -0.22 7.96 -51.93 -0.41 -0.63 16 38 H 0.38 -1.04 8.70 45.56 0.40 -0.64 16 39 H -0.26 -0.37 7.11 56.52 0.40 0.03 16 40 H -0.26 0.15 7.00 56.52 0.40 0.54 16 41 H 0.14 0.03 8.06 -52.49 -0.42 -0.39 16 42 H 0.40 -0.36 9.06 45.56 0.41 0.06 16 43 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 44 H 0.07 -0.27 8.14 -51.93 -0.42 -0.70 16 45 H 0.07 -0.34 7.57 -51.93 -0.39 -0.73 16 46 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 LS Contribution 371.71 15.07 5.60 5.60 Total: 0.00 -11.85 371.71 -9.94 -21.79 By element: Atomic # 1 Polarization: -9.96 SS G_CDS: -5.74 Total: -15.71 kcal Atomic # 6 Polarization: 3.76 SS G_CDS: -3.60 Total: 0.16 kcal Atomic # 7 Polarization: 3.13 SS G_CDS: -0.05 Total: 3.08 kcal Atomic # 8 Polarization: -7.31 SS G_CDS: -1.08 Total: -8.39 kcal Atomic # 14 Polarization: -1.46 SS G_CDS: -5.08 Total: -6.54 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -11.85 -9.94 -21.79 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11352696_13422076.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -114.635 kcal (2) G-P(sol) polarization free energy of solvation -11.848 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -126.483 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.938 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.786 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.421 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds