Wall clock time and date at job start Sat Mar 6 2021 12:59:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.37866 * 126.46084 * 2 1 4 4 C 1.46686 * 126.23105 * 359.97438 * 3 2 1 5 5 O 1.21693 * 119.99787 * 359.71350 * 4 3 2 6 6 N 1.34777 * 120.00238 * 179.72079 * 4 3 2 7 7 C 1.46497 * 120.00267 * 180.02562 * 6 4 3 8 8 C 1.52997 * 109.47195 * 179.97438 * 7 6 4 9 9 H 1.09002 * 109.47153 * 304.99547 * 8 7 6 10 10 C 1.53000 * 109.47060 * 64.99866 * 8 7 6 11 11 C 1.53001 * 109.46886 * 180.02562 * 10 8 7 12 12 C 1.53002 * 109.46963 * 299.99499 * 11 10 8 13 13 H 1.09002 * 109.47067 * 300.00341 * 12 11 10 14 14 C 1.50703 * 109.47292 * 180.02562 * 12 11 10 15 15 N 1.34770 * 119.99761 * 60.00214 * 14 12 11 16 16 O 1.21286 * 120.00016 * 240.00194 * 14 12 11 17 17 C 1.52997 * 109.47092 * 60.00194 * 12 11 10 18 18 C 1.53002 * 109.46817 * 184.99778 * 8 7 6 19 19 N 1.37649 * 107.53798 * 179.73893 * 3 2 1 20 20 C 1.35533 * 108.64169 * 0.25815 * 19 3 2 21 21 C 1.50703 * 125.56002 * 180.02562 * 20 19 3 22 22 O 1.42901 * 109.46658 * 244.97390 * 21 20 19 23 23 Si 1.86298 * 109.47427 * 4.97389 * 21 20 19 24 24 C 1.35446 * 108.87163 * 0.02562 * 20 19 3 25 25 H 1.09006 * 109.46841 * 90.00388 * 1 2 3 26 26 H 1.09001 * 109.47124 * 210.00234 * 1 2 3 27 27 H 1.09000 * 109.47314 * 330.00453 * 1 2 3 28 28 H 0.96999 * 119.99691 * 359.97438 * 6 4 3 29 29 H 1.09001 * 109.47117 * 59.98914 * 7 6 4 30 30 H 1.09004 * 109.46581 * 299.99567 * 7 6 4 31 31 H 1.09001 * 109.47194 * 299.99650 * 10 8 7 32 32 H 1.08992 * 109.47399 * 59.99823 * 10 8 7 33 33 H 1.09000 * 109.47437 * 180.02562 * 11 10 8 34 34 H 1.09002 * 109.47508 * 59.99571 * 11 10 8 35 35 H 0.97000 * 120.00479 * 359.97438 * 15 14 12 36 36 H 0.97001 * 120.00051 * 180.02562 * 15 14 12 37 37 H 1.09001 * 109.47375 * 180.02562 * 17 12 11 38 38 H 1.09002 * 109.47497 * 59.99850 * 17 12 11 39 39 H 1.09002 * 109.47075 * 299.99262 * 18 8 7 40 40 H 1.08996 * 109.47407 * 60.00219 * 18 8 7 41 41 H 0.97007 * 125.67849 * 180.28769 * 19 3 2 42 42 H 1.08995 * 109.47222 * 124.98220 * 21 20 19 43 43 H 0.96699 * 114.00320 * 60.00105 * 22 21 20 44 44 H 1.48500 * 109.99901 * 180.02562 * 23 21 20 45 45 H 1.48494 * 109.99873 * 301.32031 * 23 21 20 46 46 H 1.08007 * 126.06764 * 179.97438 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1088 0.0000 4 6 1.8899 2.5092 -0.0005 5 8 0.7027 2.7766 -0.0063 6 7 2.8037 3.4999 0.0052 7 6 2.3679 4.8985 0.0053 8 6 3.5933 5.8146 0.0130 9 1 4.2328 5.5587 0.8577 10 6 4.3734 5.6338 -1.2907 11 6 5.5992 6.5494 -1.2826 12 6 5.1471 8.0057 -1.1567 13 1 4.5076 8.2619 -2.0014 14 6 6.3544 8.9076 -1.1493 15 7 7.1945 8.9175 -2.2031 16 8 6.5699 9.6246 -0.1951 17 6 4.3669 8.1865 0.1469 18 6 3.1406 7.2707 0.1387 19 7 3.6284 0.6624 0.0060 20 6 3.6217 -0.6929 0.0038 21 6 4.8434 -1.5753 0.0093 22 8 4.9025 -2.3143 -1.2124 23 14 6.3706 -0.5208 0.1717 24 6 2.3380 -1.1247 -0.0040 25 1 -0.3633 -0.0001 -1.0277 26 1 -0.3633 -0.8900 0.5139 27 1 -0.3634 0.8900 0.5138 28 1 3.7500 3.2868 0.0101 29 1 1.7649 5.0912 0.8926 30 1 1.7734 5.0938 -0.8873 31 1 4.6959 4.5964 -1.3802 32 1 3.7339 5.8896 -2.1353 33 1 6.1548 6.4210 -2.2115 34 1 6.2387 6.2931 -0.4379 35 1 7.0223 8.3439 -2.9661 36 1 7.9718 9.4978 -2.1983 37 1 4.0444 9.2239 0.2365 38 1 5.0063 7.9302 0.9917 39 1 2.5011 7.5266 -0.7061 40 1 2.5848 7.3996 1.0674 41 1 4.4191 1.2244 0.0113 42 1 4.7883 -2.2670 0.8499 43 1 4.9532 -1.7617 -2.0043 44 1 7.5823 -1.3792 0.1777 45 1 6.4406 0.4480 -0.9515 46 1 2.0136 -2.1549 -0.0078 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11352696_13940406.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 12:59:02 Heat of formation + Delta-G solvation = -83.776562 kcal Electronic energy + Delta-G solvation = -27391.364945 eV Core-core repulsion = 23474.930438 eV Total energy + Delta-G solvation = -3916.434507 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.173 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -42.61865 -41.28066 -40.27190 -38.94231 -37.95037 -35.97792 -34.77671 -33.66550 -32.68359 -31.91022 -31.29599 -28.32636 -27.94165 -26.29023 -23.97072 -23.73456 -22.30770 -21.64496 -21.53523 -20.83502 -20.28810 -19.75420 -18.58692 -18.03071 -17.67860 -16.97514 -16.87795 -16.74539 -16.60718 -16.12783 -15.67907 -15.43717 -15.29786 -15.11027 -14.92364 -14.84083 -14.56224 -14.16005 -13.93961 -13.81587 -13.56946 -13.49423 -13.42629 -13.35220 -13.06602 -12.98508 -12.62791 -12.40236 -12.26921 -12.23363 -11.90481 -11.61910 -11.31824 -10.96348 -10.82822 -10.80108 -10.72479 -10.22290 -9.79107 -9.16236 -5.31995 0.33802 0.92300 1.19578 1.58516 1.60354 1.64661 1.89800 2.04520 2.37651 2.45819 3.14180 3.36871 3.38688 3.48169 3.52981 3.75417 3.83515 3.87872 4.00406 4.13450 4.18189 4.22807 4.25524 4.30985 4.32236 4.36065 4.51352 4.56118 4.66058 4.77962 4.78352 4.82584 4.89496 4.94432 4.99448 5.03836 5.06955 5.14982 5.21049 5.26245 5.32721 5.47703 5.67824 5.72657 5.92574 6.14424 6.22601 6.26079 6.40405 7.13757 7.22470 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 C -0.068 4.068 3 C -0.052 4.052 4 C 0.589 3.411 5 O -0.520 6.520 6 N -0.733 5.733 7 C 0.124 3.876 8 C -0.102 4.102 9 H 0.081 0.919 10 C -0.114 4.114 11 C -0.111 4.111 12 C -0.109 4.109 13 H 0.100 0.900 14 C 0.519 3.481 15 N -0.857 5.857 16 O -0.540 6.540 17 C -0.099 4.099 18 C -0.112 4.112 19 N -0.536 5.536 20 C 0.016 3.984 21 C -0.045 4.045 22 O -0.519 6.519 23 Si 0.667 3.333 24 C -0.171 4.171 25 H 0.068 0.932 26 H 0.065 0.935 27 H 0.081 0.919 28 H 0.392 0.608 29 H 0.074 0.926 30 H 0.072 0.928 31 H 0.063 0.937 32 H 0.071 0.929 33 H 0.068 0.932 34 H 0.070 0.930 35 H 0.401 0.599 36 H 0.402 0.598 37 H 0.074 0.926 38 H 0.072 0.928 39 H 0.069 0.931 40 H 0.074 0.926 41 H 0.410 0.590 42 H 0.133 0.867 43 H 0.377 0.623 44 H -0.243 1.243 45 H -0.255 1.255 46 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.576 -0.369 -1.978 4.103 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.077 4.077 3 C -0.164 4.164 4 C 0.377 3.623 5 O -0.395 6.395 6 N -0.385 5.385 7 C 0.001 3.999 8 C -0.121 4.121 9 H 0.099 0.901 10 C -0.152 4.152 11 C -0.148 4.148 12 C -0.130 4.130 13 H 0.118 0.882 14 C 0.304 3.696 15 N -0.421 5.421 16 O -0.417 6.417 17 C -0.137 4.137 18 C -0.150 4.150 19 N -0.137 5.137 20 C -0.100 4.100 21 C -0.156 4.156 22 O -0.325 6.325 23 Si 0.567 3.433 24 C -0.196 4.196 25 H 0.087 0.913 26 H 0.084 0.916 27 H 0.100 0.900 28 H 0.226 0.774 29 H 0.092 0.908 30 H 0.091 0.909 31 H 0.082 0.918 32 H 0.090 0.910 33 H 0.087 0.913 34 H 0.089 0.911 35 H 0.229 0.771 36 H 0.233 0.767 37 H 0.093 0.907 38 H 0.091 0.909 39 H 0.088 0.912 40 H 0.092 0.908 41 H 0.249 0.751 42 H 0.150 0.850 43 H 0.225 0.775 44 H -0.167 1.167 45 H -0.180 1.180 46 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 3.526 0.111 -1.236 3.738 hybrid contribution 0.979 -0.158 -1.657 1.931 sum 4.505 -0.047 -2.893 5.354 Atomic orbital electron populations 1.20390 0.88905 1.03228 1.02479 1.20049 0.96093 0.90531 1.01000 1.20192 0.83285 0.93534 1.19387 1.17010 0.85855 0.82911 0.76496 1.90851 1.15882 1.83127 1.49676 1.45912 1.09191 1.06662 1.76764 1.21464 0.96519 0.78783 1.03095 1.21477 0.96236 0.95606 0.98782 0.90097 1.21615 0.96552 0.99215 0.97790 1.21538 0.98077 0.92548 1.02673 1.21392 0.95060 0.94961 1.01618 0.88240 1.20723 0.84239 0.82620 0.82039 1.43942 1.29719 1.47190 1.21216 1.90775 1.74431 1.42176 1.34276 1.21354 0.96052 1.00448 0.95882 1.21536 0.97694 0.92663 1.03081 1.41998 1.07092 1.06420 1.58176 1.20782 0.97668 0.82589 1.08974 1.24492 1.00771 0.99659 0.90689 1.86676 1.95088 1.35565 1.15158 0.95647 0.77573 0.81352 0.88716 1.20652 0.90524 0.99137 1.09278 0.91322 0.91649 0.90004 0.77396 0.90791 0.90928 0.91799 0.91037 0.91306 0.91084 0.77067 0.76749 0.90732 0.90920 0.91221 0.90772 0.75073 0.84962 0.77486 1.16670 1.18006 0.83546 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.18 9.83 36.01 0.35 0.17 16 2 C -0.07 -0.15 6.21 -104.16 -0.65 -0.79 16 3 C -0.05 -0.06 7.06 -81.98 -0.58 -0.64 16 4 C 0.59 1.09 7.79 -12.85 -0.10 0.99 16 5 O -0.52 -2.78 14.81 5.20 0.08 -2.71 16 6 N -0.73 1.18 5.28 -61.62 -0.33 0.85 16 7 C 0.12 -0.23 5.06 -4.04 -0.02 -0.25 16 8 C -0.10 0.37 2.22 -90.62 -0.20 0.17 16 9 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 10 C -0.11 0.49 5.08 -26.73 -0.14 0.35 16 11 C -0.11 0.44 5.10 -26.73 -0.14 0.31 16 12 C -0.11 0.26 2.52 -91.77 -0.23 0.03 16 13 H 0.10 -0.35 8.14 -51.93 -0.42 -0.78 16 14 C 0.52 0.14 7.43 -10.99 -0.08 0.06 16 15 N -0.86 2.49 8.77 31.22 0.27 2.77 16 16 O -0.54 -2.78 16.82 5.55 0.09 -2.68 16 17 C -0.10 0.13 4.49 -26.71 -0.12 0.01 16 18 C -0.11 0.32 5.21 -26.70 -0.14 0.18 16 19 N -0.54 0.86 5.47 -5.70 -0.03 0.83 16 20 C 0.02 -0.01 6.10 -81.95 -0.50 -0.51 16 21 C -0.05 0.09 2.98 36.01 0.11 0.20 16 22 O -0.52 0.18 12.88 -35.23 -0.45 -0.28 16 23 Si 0.67 -2.24 30.98 -169.99 -5.27 -7.51 16 24 C -0.17 -0.18 10.66 -39.98 -0.43 -0.60 16 25 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 26 H 0.06 0.05 8.14 -51.93 -0.42 -0.38 16 27 H 0.08 0.28 6.49 -51.93 -0.34 -0.06 16 28 H 0.39 -1.66 6.78 -40.82 -0.28 -1.94 16 29 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 30 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 31 H 0.06 -0.31 7.18 -51.93 -0.37 -0.68 16 32 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 33 H 0.07 -0.36 7.56 -51.93 -0.39 -0.75 16 34 H 0.07 -0.23 8.14 -51.93 -0.42 -0.66 16 35 H 0.40 -2.30 8.25 -40.82 -0.34 -2.64 16 36 H 0.40 -1.24 8.93 -40.82 -0.36 -1.61 16 37 H 0.07 0.00 8.10 -51.93 -0.42 -0.42 16 38 H 0.07 -0.01 8.10 -51.93 -0.42 -0.43 16 39 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 40 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 41 H 0.41 -1.81 6.00 -40.82 -0.24 -2.05 16 42 H 0.13 -0.36 7.96 -51.93 -0.41 -0.77 16 43 H 0.38 -1.17 8.70 45.56 0.40 -0.77 16 44 H -0.24 -0.05 7.11 56.52 0.40 0.36 16 45 H -0.26 0.57 7.11 56.52 0.40 0.97 16 46 H 0.15 0.06 8.06 -52.48 -0.42 -0.37 16 LS Contribution 370.48 15.07 5.58 5.58 Total: 0.00 -10.45 370.48 -9.94 -20.39 By element: Atomic # 1 Polarization: -9.88 SS G_CDS: -7.03 Total: -16.91 kcal Atomic # 6 Polarization: 2.52 SS G_CDS: -2.86 Total: -0.33 kcal Atomic # 7 Polarization: 4.53 SS G_CDS: -0.08 Total: 4.45 kcal Atomic # 8 Polarization: -5.38 SS G_CDS: -0.28 Total: -5.67 kcal Atomic # 14 Polarization: -2.24 SS G_CDS: -5.27 Total: -7.51 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -10.45 -9.94 -20.39 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11352696_13940406.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.389 kcal (2) G-P(sol) polarization free energy of solvation -10.451 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.840 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.937 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.388 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.777 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds