Wall clock time and date at job start Sat Mar 6 2021 12:59:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34776 * 1 3 3 O 1.21281 * 120.00227 * 2 1 4 4 C 1.50701 * 120.00175 * 179.97438 * 2 1 3 5 5 H 1.09002 * 109.47060 * 60.00522 * 4 2 1 6 6 C 1.53002 * 109.47419 * 180.02562 * 4 2 1 7 7 C 1.52997 * 109.47415 * 179.97438 * 6 4 2 8 8 C 1.53002 * 109.46978 * 300.00098 * 7 6 4 9 9 H 1.09002 * 109.46838 * 299.99316 * 8 7 6 10 10 C 1.53000 * 109.46806 * 179.97438 * 8 7 6 11 11 N 1.46497 * 109.46926 * 174.99580 * 10 8 7 12 12 C 1.34776 * 119.99939 * 180.02562 * 11 10 8 13 13 O 1.21281 * 120.00393 * 359.97438 * 12 11 10 14 14 C 1.50703 * 119.99815 * 180.02562 * 12 11 10 15 15 C 1.53543 * 109.82326 * 80.86598 * 14 12 11 16 16 C 1.53044 * 108.56251 * 180.48983 * 15 14 12 17 17 C 1.50204 * 110.31220 * 310.42299 * 16 15 14 18 18 C 1.50701 * 118.54550 * 200.07464 * 17 16 15 19 19 O 1.42904 * 109.47053 * 300.00447 * 18 17 16 20 20 Si 1.86298 * 109.47076 * 180.02562 * 18 17 16 21 21 C 1.31118 * 122.91110 * 20.05896 * 17 16 15 22 22 N 1.38967 * 121.86761 * 359.65254 * 21 17 16 23 23 C 1.53002 * 109.47128 * 59.99726 * 8 7 6 24 24 C 1.52992 * 109.47106 * 300.00123 * 23 8 7 25 25 H 0.96995 * 119.99730 * 179.97438 * 1 2 3 26 26 H 0.97001 * 119.99812 * 0.02562 * 1 2 3 27 27 H 1.09000 * 109.46986 * 300.00096 * 6 4 2 28 28 H 1.09002 * 109.47075 * 59.99368 * 6 4 2 29 29 H 1.09002 * 109.47045 * 59.99931 * 7 6 4 30 30 H 1.08998 * 109.47171 * 179.97438 * 7 6 4 31 31 H 1.08991 * 109.47625 * 294.99856 * 10 8 7 32 32 H 1.09002 * 109.47069 * 55.00175 * 10 8 7 33 33 H 0.96997 * 120.00347 * 0.02562 * 11 10 8 34 34 H 1.09000 * 109.81725 * 319.99566 * 14 12 11 35 35 H 1.09008 * 109.61619 * 300.20473 * 15 14 12 36 36 H 1.08991 * 109.62525 * 60.76276 * 15 14 12 37 37 H 1.08995 * 109.32991 * 70.68284 * 16 15 14 38 38 H 1.08999 * 109.32686 * 190.33747 * 16 15 14 39 39 H 1.09000 * 109.46868 * 59.99920 * 18 17 16 40 40 H 0.96703 * 113.99970 * 300.00050 * 19 18 17 41 41 H 1.48508 * 109.99899 * 180.02562 * 20 18 17 42 42 H 1.48497 * 110.00089 * 301.31649 * 20 18 17 43 43 H 1.07994 * 119.07597 * 179.61311 * 21 17 16 44 44 H 0.96996 * 120.58314 * 193.29018 * 22 21 17 45 45 H 1.09002 * 109.47070 * 60.00059 * 23 8 7 46 46 H 1.08996 * 109.46550 * 179.97438 * 23 8 7 47 47 H 1.09002 * 109.47103 * 299.99915 * 24 23 8 48 48 H 1.08998 * 109.46862 * 180.02562 * 24 23 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3051 0.0006 5 1 1.8381 -1.8770 -0.8892 6 6 3.6056 -1.0255 0.0011 7 6 4.3706 -2.3505 0.0023 8 6 4.0004 -3.1520 1.2520 9 1 4.2634 -2.5798 2.1417 10 6 4.7649 -4.4772 1.2528 11 7 4.5031 -5.1912 2.5050 12 6 5.0755 -6.3906 2.7292 13 8 5.8069 -6.8791 1.8942 14 6 4.8057 -7.1253 4.0171 15 6 3.4575 -7.8547 3.9278 16 6 3.2071 -8.5795 5.2523 17 6 4.4138 -9.3842 5.6426 18 6 4.2406 -10.5088 6.6307 19 8 3.7366 -9.9875 7.8621 20 14 5.8855 -11.3300 6.9315 21 6 5.6112 -9.1519 5.1614 22 7 5.8480 -8.1378 4.2412 23 6 2.4961 -3.4315 1.2514 24 6 1.7312 -2.1066 1.2502 25 1 -0.4849 -0.8400 -0.0004 26 1 -0.4850 0.8401 -0.0004 27 1 3.8692 -0.4542 -0.8889 28 1 3.8685 -0.4537 0.8910 29 1 4.1077 -2.9227 -0.8874 30 1 5.4422 -2.1513 0.0023 31 1 4.4362 -5.0870 0.4114 32 1 5.8333 -4.2804 1.1634 33 1 3.9178 -4.8007 3.1727 34 1 4.7903 -6.4204 4.8484 35 1 2.6613 -7.1317 3.7500 36 1 3.4864 -8.5790 3.1139 37 1 2.9954 -7.8462 6.0304 38 1 2.3519 -9.2463 5.1426 39 1 3.5373 -11.2391 6.2304 40 1 4.3126 -9.3302 8.2760 41 1 5.7281 -12.4414 7.9039 42 1 6.4357 -11.8484 5.6533 43 1 6.4369 -9.7654 5.4899 44 1 6.6858 -8.0993 3.7540 45 1 2.2332 -4.0037 0.3617 46 1 2.2325 -4.0029 2.1414 47 1 1.9941 -1.5344 2.1399 48 1 0.6595 -2.3058 1.2503 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11352696_15413834.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 12:59:08 Heat of formation + Delta-G solvation = -113.167328 kcal Electronic energy + Delta-G solvation = -27741.971960 eV Core-core repulsion = 23796.951495 eV Total energy + Delta-G solvation = -3945.020465 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.188 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -41.47403 -41.03347 -39.63939 -38.83550 -37.31912 -35.90627 -34.71521 -33.26885 -33.14649 -32.10198 -31.63808 -28.19879 -26.61544 -25.27496 -23.88119 -23.68462 -23.21011 -21.67262 -21.27130 -20.60439 -19.31422 -19.07549 -18.43273 -17.94479 -17.61787 -17.20299 -16.75064 -16.55217 -16.24994 -15.95649 -15.76071 -15.47510 -15.32023 -15.18016 -15.01121 -14.79336 -14.60134 -14.42641 -14.12532 -14.04179 -13.67861 -13.42590 -13.16359 -12.99151 -12.92463 -12.84188 -12.20453 -12.17557 -12.05333 -11.92874 -11.84709 -11.74477 -11.38783 -11.22517 -11.06617 -10.88739 -10.78242 -10.64226 -10.15450 -10.13176 -8.42839 -4.99772 1.33879 1.43545 1.50188 1.63078 1.63852 1.95404 2.00614 2.62563 2.67327 3.57132 3.60597 3.64896 3.70556 3.75661 3.84002 3.90473 4.01527 4.07068 4.11832 4.23546 4.35408 4.41927 4.47535 4.48448 4.50149 4.56912 4.64854 4.66707 4.69326 4.77270 4.80954 4.88197 5.03553 5.03880 5.13255 5.16691 5.22584 5.26516 5.27935 5.31207 5.34997 5.39660 5.54418 5.59777 5.88932 6.27285 6.47000 6.48990 6.82726 6.97102 7.14111 7.35293 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.840 5.840 2 C 0.513 3.487 3 O -0.599 6.599 4 C -0.104 4.104 5 H 0.116 0.884 6 C -0.098 4.098 7 C -0.108 4.108 8 C -0.091 4.091 9 H 0.085 0.915 10 C 0.126 3.874 11 N -0.708 5.708 12 C 0.510 3.490 13 O -0.578 6.578 14 C 0.139 3.861 15 C -0.122 4.122 16 C -0.050 4.050 17 C -0.287 4.287 18 C -0.044 4.044 19 O -0.562 6.562 20 Si 0.757 3.243 21 C 0.140 3.860 22 N -0.739 5.739 23 C -0.111 4.111 24 C -0.105 4.105 25 H 0.417 0.583 26 H 0.404 0.596 27 H 0.053 0.947 28 H 0.056 0.944 29 H 0.073 0.927 30 H 0.067 0.933 31 H 0.061 0.939 32 H 0.057 0.943 33 H 0.418 0.582 34 H 0.117 0.883 35 H 0.103 0.897 36 H 0.051 0.949 37 H 0.082 0.918 38 H 0.063 0.937 39 H 0.090 0.910 40 H 0.392 0.608 41 H -0.307 1.307 42 H -0.295 1.295 43 H 0.141 0.859 44 H 0.406 0.594 45 H 0.073 0.927 46 H 0.084 0.916 47 H 0.064 0.936 48 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.962 1.818 2.143 4.857 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.403 5.403 2 C 0.299 3.701 3 O -0.480 6.480 4 C -0.125 4.125 5 H 0.134 0.866 6 C -0.136 4.136 7 C -0.146 4.146 8 C -0.110 4.110 9 H 0.103 0.897 10 C 0.003 3.997 11 N -0.361 5.361 12 C 0.296 3.704 13 O -0.457 6.457 14 C 0.030 3.970 15 C -0.160 4.160 16 C -0.087 4.087 17 C -0.298 4.298 18 C -0.156 4.156 19 O -0.370 6.370 20 Si 0.666 3.334 21 C 0.019 3.981 22 N -0.371 5.371 23 C -0.148 4.148 24 C -0.143 4.143 25 H 0.249 0.751 26 H 0.234 0.766 27 H 0.072 0.928 28 H 0.075 0.925 29 H 0.092 0.908 30 H 0.085 0.915 31 H 0.080 0.920 32 H 0.075 0.925 33 H 0.256 0.744 34 H 0.134 0.866 35 H 0.122 0.878 36 H 0.070 0.930 37 H 0.100 0.900 38 H 0.081 0.919 39 H 0.107 0.893 40 H 0.242 0.758 41 H -0.236 1.236 42 H -0.223 1.223 43 H 0.158 0.842 44 H 0.242 0.758 45 H 0.091 0.909 46 H 0.102 0.898 47 H 0.082 0.918 48 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -3.043 1.009 1.359 3.482 hybrid contribution -0.685 0.055 -0.556 0.884 sum -3.728 1.064 0.803 3.959 Atomic orbital electron populations 1.43841 1.06538 1.13673 1.76283 1.21226 0.83432 0.91625 0.73818 1.90746 1.69478 1.35829 1.51968 1.21405 0.95589 0.92883 1.02622 0.86586 1.21273 0.92954 0.97196 1.02160 1.21482 1.00165 0.95025 0.97969 1.21363 0.95880 0.94014 0.99702 0.89682 1.21385 0.99773 0.92629 0.85933 1.45834 1.49654 1.19207 1.21358 1.20898 0.79362 0.81528 0.88566 1.90730 1.39007 1.68022 1.47984 1.21124 0.89923 0.91190 0.94719 1.21846 0.95351 1.00197 0.98638 1.19916 0.95287 0.97856 0.95641 1.21002 0.94623 1.05323 1.08832 1.24713 1.08248 0.97831 0.84815 1.86428 1.51972 1.62640 1.35930 0.94233 0.79081 0.82065 0.78006 1.20480 0.96181 0.90449 0.90951 1.44410 1.19186 1.28239 1.45285 1.21611 0.92838 0.96608 1.03738 1.21524 1.01541 0.95713 0.95477 0.75102 0.76554 0.92785 0.92539 0.90821 0.91456 0.92019 0.92508 0.74435 0.86558 0.87847 0.93014 0.90008 0.91859 0.89254 0.75815 1.23605 1.22317 0.84208 0.75756 0.90856 0.89765 0.91761 0.89221 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 5.57 8.77 -173.53 -1.52 4.05 16 2 C 0.51 0.39 7.42 87.66 0.65 1.04 16 3 O -0.60 -7.19 16.82 -3.03 -0.05 -7.24 16 4 C -0.10 0.56 2.53 -11.54 -0.03 0.53 16 5 H 0.12 -0.99 8.14 -2.39 -0.02 -1.01 16 6 C -0.10 0.17 4.49 30.59 0.14 0.31 16 7 C -0.11 0.60 5.20 30.59 0.16 0.76 16 8 C -0.09 0.77 2.23 -10.79 -0.02 0.75 16 9 H 0.08 -0.74 8.14 -2.39 -0.02 -0.76 16 10 C 0.13 -0.62 5.06 86.38 0.44 -0.19 16 11 N -0.71 4.73 5.28 -463.07 -2.45 2.28 16 12 C 0.51 -0.23 7.09 87.66 0.62 0.39 16 13 O -0.58 -5.29 16.08 -3.03 -0.05 -5.34 16 14 C 0.14 -0.56 3.36 44.33 0.15 -0.41 16 15 C -0.12 0.51 5.47 30.79 0.17 0.68 16 16 C -0.05 0.13 5.75 29.71 0.17 0.30 16 17 C -0.29 0.29 5.44 -16.76 -0.09 0.20 16 18 C -0.04 -0.01 2.83 71.24 0.20 0.19 16 19 O -0.56 -0.18 12.78 -148.98 -1.90 -2.09 16 20 Si 0.76 -0.52 29.68 68.60 2.04 1.52 16 21 C 0.14 -0.21 9.63 83.40 0.80 0.59 16 22 N -0.74 0.62 5.47 -328.95 -1.80 -1.18 16 23 C -0.11 1.25 5.08 30.59 0.16 1.40 16 24 C -0.10 1.05 5.10 30.59 0.16 1.21 16 25 H 0.42 -5.60 8.25 -92.71 -0.76 -6.36 16 26 H 0.40 -2.66 8.93 -92.71 -0.83 -3.49 16 27 H 0.05 0.12 8.10 -2.39 -0.02 0.10 16 28 H 0.06 0.08 8.10 -2.39 -0.02 0.06 16 29 H 0.07 -0.46 8.14 -2.39 -0.02 -0.48 16 30 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 31 H 0.06 -0.15 8.14 -2.39 -0.02 -0.17 16 32 H 0.06 -0.08 8.14 -2.39 -0.02 -0.10 16 33 H 0.42 -5.39 7.65 -92.71 -0.71 -6.10 16 34 H 0.12 -1.03 8.14 -2.39 -0.02 -1.05 16 35 H 0.10 -0.97 8.14 -2.38 -0.02 -0.99 16 36 H 0.05 0.06 8.14 -2.39 -0.02 0.04 16 37 H 0.08 -0.40 8.14 -2.39 -0.02 -0.42 16 38 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 39 H 0.09 0.25 7.96 -2.39 -0.02 0.23 16 40 H 0.39 -3.16 8.70 -74.06 -0.64 -3.80 16 41 H -0.31 -2.33 7.11 99.48 0.71 -1.62 16 42 H -0.30 -1.42 7.10 99.48 0.71 -0.72 16 43 H 0.14 -0.58 4.37 -2.91 -0.01 -0.59 16 44 H 0.41 0.20 8.10 -92.71 -0.75 -0.55 16 45 H 0.07 -0.80 8.14 -2.39 -0.02 -0.82 16 46 H 0.08 -1.17 7.18 -2.39 -0.02 -1.19 16 47 H 0.06 -0.50 8.14 -2.39 -0.02 -0.52 16 48 H 0.09 -1.22 7.56 -2.39 -0.02 -1.23 16 Total: 0.00 -27.44 376.52 -4.71 -32.15 By element: Atomic # 1 Polarization: -29.28 SS G_CDS: -2.64 Total: -31.92 kcal Atomic # 6 Polarization: 4.09 SS G_CDS: 3.67 Total: 7.75 kcal Atomic # 7 Polarization: 10.93 SS G_CDS: -5.77 Total: 5.16 kcal Atomic # 8 Polarization: -12.66 SS G_CDS: -2.00 Total: -14.66 kcal Atomic # 14 Polarization: -0.52 SS G_CDS: 2.04 Total: 1.52 kcal Total: -27.44 -4.71 -32.15 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11352696_15413834.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.019 kcal (2) G-P(sol) polarization free energy of solvation -27.438 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.456 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.711 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.149 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.167 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds