Wall clock time and date at job start Sat Mar 6 2021 12:59:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34777 * 1 3 3 O 1.21283 * 120.00463 * 2 1 4 4 C 1.50700 * 119.99675 * 179.72123 * 2 1 3 5 5 H 1.09009 * 109.47352 * 300.27556 * 4 2 1 6 6 C 1.52996 * 109.47442 * 60.27868 * 4 2 1 7 7 C 1.52997 * 109.47627 * 180.02562 * 6 4 2 8 8 C 1.53004 * 109.46997 * 299.99959 * 7 6 4 9 9 H 1.09000 * 109.46887 * 300.00275 * 8 7 6 10 10 C 1.52992 * 109.47322 * 179.97438 * 8 7 6 11 11 N 1.46501 * 109.47269 * 65.00077 * 10 8 7 12 12 C 1.34770 * 120.00665 * 180.02562 * 11 10 8 13 13 O 1.21630 * 119.99895 * 359.97438 * 12 11 10 14 14 C 1.47262 * 120.00421 * 179.97438 * 12 11 10 15 15 C 1.36339 * 126.97188 * 179.70574 * 14 12 11 16 16 C 1.51004 * 126.78601 * 0.07231 * 15 14 12 17 17 C 1.53392 * 108.24266 * 164.25220 * 16 15 14 18 18 C 1.53166 * 109.04415 * 48.48158 * 17 16 15 19 19 C 1.53377 * 109.31420 * 290.19718 * 18 17 16 20 20 N 1.35203 * 108.66214 * 179.86324 * 15 14 12 21 21 C 1.36427 * 109.89986 * 0.41852 * 20 15 14 22 22 C 1.50701 * 125.49444 * 179.78301 * 21 20 15 23 23 O 1.42904 * 109.47007 * 329.98324 * 22 21 20 24 24 Si 1.86300 * 109.47075 * 209.98496 * 22 21 20 25 25 C 1.34495 * 109.01262 * 359.74850 * 21 20 15 26 26 C 1.53005 * 109.46795 * 59.99795 * 8 7 6 27 27 C 1.52997 * 109.47190 * 299.99692 * 26 8 7 28 28 H 0.97004 * 119.99652 * 0.02562 * 1 2 3 29 29 H 0.97000 * 119.99894 * 179.97438 * 1 2 3 30 30 H 1.09004 * 109.46762 * 299.99804 * 6 4 2 31 31 H 1.08995 * 109.47223 * 59.99497 * 6 4 2 32 32 H 1.08998 * 109.47770 * 179.97438 * 7 6 4 33 33 H 1.09003 * 109.47201 * 59.99145 * 7 6 4 34 34 H 1.09004 * 109.47552 * 184.99551 * 10 8 7 35 35 H 1.08999 * 109.47347 * 305.00401 * 10 8 7 36 36 H 0.97004 * 119.99608 * 0.02562 * 11 10 8 37 37 H 1.08993 * 109.71162 * 283.93963 * 16 15 14 38 38 H 1.08999 * 109.70520 * 44.52897 * 16 15 14 39 39 H 1.08997 * 109.54506 * 168.35211 * 17 16 15 40 40 H 1.09004 * 109.54919 * 288.61167 * 17 16 15 41 41 H 1.09000 * 109.45643 * 50.44330 * 18 17 16 42 42 H 1.08996 * 109.46111 * 170.41397 * 18 17 16 43 43 H 1.08999 * 110.11955 * 291.23460 * 19 18 17 44 44 H 1.08995 * 109.08791 * 170.83956 * 19 18 17 45 45 H 1.08997 * 109.47319 * 89.98297 * 22 21 20 46 46 H 0.96706 * 113.99709 * 179.97438 * 23 22 21 47 47 H 1.48502 * 109.99740 * 60.00126 * 24 22 21 48 48 H 1.48504 * 109.99870 * 181.31643 * 24 22 21 49 49 H 1.08000 * 126.81917 * 179.97438 * 25 21 20 50 50 H 1.09004 * 109.46658 * 180.02562 * 26 8 7 51 51 H 1.08995 * 109.47438 * 60.00600 * 26 8 7 52 52 H 1.09000 * 109.47849 * 300.00351 * 27 26 8 53 53 H 1.08998 * 109.47443 * 180.02562 * 27 26 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9543 1.0503 0.0000 4 6 2.1012 -1.3051 0.0064 5 1 1.8341 -1.8746 0.8967 6 6 1.7369 -2.1105 -1.2424 7 6 2.5013 -3.4358 -1.2357 8 6 4.0057 -3.1568 -1.2297 9 1 4.2731 -2.5876 -2.1200 10 6 4.7701 -4.4820 -1.2224 11 7 4.5142 -5.2005 -2.4732 12 6 5.0866 -6.4011 -2.6902 13 8 5.8162 -6.8881 -1.8476 14 6 4.8289 -7.1234 -3.9473 15 6 5.3341 -8.3351 -4.3152 16 6 6.2703 -9.2061 -3.5120 17 6 6.2566 -10.6142 -4.1201 18 6 6.4411 -10.5055 -5.6367 19 6 5.1810 -9.8905 -6.2583 20 7 4.8540 -8.6505 -5.5391 21 6 4.0409 -7.6523 -5.9904 22 6 3.3245 -7.6393 -7.3161 23 8 4.0870 -8.3726 -8.2769 24 14 3.1223 -5.8802 -7.8955 25 6 3.9812 -6.6820 -5.0610 26 6 4.3700 -2.3515 0.0191 27 6 3.6056 -1.0262 0.0123 28 1 -0.4850 0.8401 -0.0004 29 1 -0.4850 -0.8401 -0.0004 30 1 0.6652 -2.3097 -1.2464 31 1 2.0039 -1.5411 -2.1327 32 1 2.2414 -4.0098 -2.1251 33 1 2.2339 -4.0050 -0.3454 34 1 5.8381 -4.2850 -1.1287 35 1 4.4373 -5.0889 -0.3803 36 1 3.9326 -4.8119 -3.1454 37 1 7.2798 -8.7973 -3.5542 38 1 5.9342 -9.2492 -2.4760 39 1 7.0696 -11.2029 -3.6952 40 1 5.3034 -11.0962 -3.9025 41 1 7.3039 -9.8755 -5.8532 42 1 6.6028 -11.4989 -6.0550 43 1 4.3467 -10.5877 -6.1817 44 1 5.3748 -9.6641 -7.3067 45 1 2.3430 -8.0997 -7.2033 46 1 3.6846 -8.4064 -9.1555 47 1 4.4535 -5.2414 -8.0534 48 1 2.3891 -5.8519 -9.1866 49 1 3.4210 -5.7607 -5.1222 50 1 5.4417 -2.1523 0.0231 51 1 4.1026 -2.9206 0.9094 52 1 3.8730 -0.4569 -0.8779 53 1 3.8654 -0.4522 0.9017 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11352696_16915396.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 12:59:15 Heat of formation + Delta-G solvation = -92.007173 kcal Electronic energy + Delta-G solvation = -33220.255067 eV Core-core repulsion = 28864.162275 eV Total energy + Delta-G solvation = -4356.092791 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.204 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -42.72048 -41.13219 -40.24670 -38.78059 -37.99965 -36.88445 -35.69269 -34.64848 -33.54049 -32.29808 -31.58425 -31.19240 -29.56282 -27.36661 -26.36280 -24.55507 -24.11910 -23.61109 -22.91329 -21.65259 -21.29869 -20.99636 -20.50682 -19.49648 -18.61200 -18.37885 -18.11733 -17.55965 -16.92564 -16.72260 -16.53738 -16.41939 -16.02883 -15.88140 -15.44156 -15.28827 -15.22199 -15.11292 -14.98441 -14.75986 -14.60200 -14.56634 -14.33758 -14.04544 -13.84133 -13.66643 -13.35873 -13.16717 -13.09160 -12.91283 -12.81638 -12.48960 -12.16853 -12.09519 -12.01053 -11.98815 -11.87476 -11.71374 -11.67089 -11.31971 -11.00654 -10.88041 -10.75189 -10.70184 -10.59670 -10.02958 -9.51321 -8.97891 -4.90376 0.75734 1.05990 1.51169 1.64687 1.68518 1.85318 2.06704 2.49645 2.59782 2.67313 3.11157 3.56373 3.59230 3.67845 3.71837 3.76199 3.80559 3.81835 3.83170 4.08630 4.16452 4.19687 4.30064 4.32131 4.39662 4.43241 4.46820 4.48557 4.54878 4.56591 4.63179 4.67236 4.76816 4.77718 4.77839 4.84388 4.88097 4.94128 4.97997 5.01111 5.10274 5.18788 5.19938 5.20161 5.24344 5.30150 5.34425 5.43769 5.55195 5.64431 5.78006 5.93411 6.09844 6.24713 6.51703 6.53441 6.74725 7.39963 7.42672 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.840 5.840 2 C 0.514 3.486 3 O -0.600 6.600 4 C -0.104 4.104 5 H 0.117 0.883 6 C -0.104 4.104 7 C -0.110 4.110 8 C -0.091 4.091 9 H 0.083 0.917 10 C 0.129 3.871 11 N -0.712 5.712 12 C 0.588 3.412 13 O -0.592 6.592 14 C -0.254 4.254 15 C 0.096 3.904 16 C -0.053 4.053 17 C -0.123 4.123 18 C -0.134 4.134 19 C 0.100 3.900 20 N -0.428 5.428 21 C 0.018 3.982 22 C -0.056 4.056 23 O -0.558 6.558 24 Si 0.795 3.205 25 C -0.164 4.164 26 C -0.108 4.108 27 C -0.097 4.097 28 H 0.404 0.596 29 H 0.418 0.582 30 H 0.092 0.908 31 H 0.065 0.935 32 H 0.084 0.916 33 H 0.073 0.927 34 H 0.051 0.949 35 H 0.061 0.939 36 H 0.413 0.587 37 H 0.076 0.924 38 H 0.083 0.917 39 H 0.089 0.911 40 H 0.070 0.930 41 H 0.064 0.936 42 H 0.107 0.893 43 H 0.089 0.911 44 H 0.107 0.893 45 H 0.101 0.899 46 H 0.399 0.601 47 H -0.310 1.310 48 H -0.279 1.279 49 H 0.186 0.814 50 H 0.064 0.936 51 H 0.074 0.926 52 H 0.055 0.945 53 H 0.053 0.947 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.371 -4.072 -3.827 10.064 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.403 5.403 2 C 0.300 3.700 3 O -0.481 6.481 4 C -0.125 4.125 5 H 0.135 0.865 6 C -0.141 4.141 7 C -0.148 4.148 8 C -0.110 4.110 9 H 0.101 0.899 10 C 0.006 3.994 11 N -0.363 5.363 12 C 0.378 3.622 13 O -0.475 6.475 14 C -0.264 4.264 15 C -0.022 4.022 16 C -0.091 4.091 17 C -0.161 4.161 18 C -0.172 4.172 19 C -0.020 4.020 20 N -0.104 5.104 21 C -0.091 4.091 22 C -0.164 4.164 23 O -0.369 6.369 24 Si 0.698 3.302 25 C -0.188 4.188 26 C -0.146 4.146 27 C -0.135 4.135 28 H 0.234 0.766 29 H 0.249 0.751 30 H 0.110 0.890 31 H 0.083 0.917 32 H 0.102 0.898 33 H 0.091 0.909 34 H 0.069 0.931 35 H 0.079 0.921 36 H 0.251 0.749 37 H 0.094 0.906 38 H 0.102 0.898 39 H 0.107 0.893 40 H 0.089 0.911 41 H 0.083 0.917 42 H 0.126 0.874 43 H 0.107 0.893 44 H 0.125 0.875 45 H 0.119 0.881 46 H 0.251 0.749 47 H -0.238 1.238 48 H -0.206 1.206 49 H 0.203 0.797 50 H 0.083 0.917 51 H 0.093 0.907 52 H 0.074 0.926 53 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges -6.749 -3.658 -3.579 8.470 hybrid contribution -0.118 -0.432 -1.026 1.119 sum -6.867 -4.090 -4.605 9.224 Atomic orbital electron populations 1.43831 1.06495 1.13671 1.76295 1.21205 0.83437 0.91569 0.73778 1.90744 1.69500 1.35837 1.52003 1.21408 0.95488 0.92909 1.02715 0.86539 1.21524 1.01602 0.95537 0.95469 1.21605 0.92654 0.96695 1.03801 1.21363 0.96106 0.93896 0.99620 0.89908 1.21339 0.99469 0.92598 0.86018 1.45627 1.50416 1.19233 1.21057 1.17522 0.78688 0.80917 0.85081 1.90739 1.40081 1.68930 1.47733 1.19966 1.10461 0.98267 0.97689 1.20597 0.98861 0.95859 0.86921 1.20423 0.96980 0.93464 0.98231 1.21704 1.03592 0.95685 0.95103 1.21968 0.96389 1.02924 0.95889 1.22411 0.98782 0.83244 0.97570 1.44035 1.35854 1.16949 1.13571 1.20055 1.01061 0.90893 0.97043 1.24698 0.95814 1.09965 0.85948 1.86450 1.51589 1.74310 1.24565 0.93673 0.79938 0.73748 0.82817 1.21932 1.03869 1.00417 0.92545 1.21478 1.00075 0.95059 0.97964 1.21267 0.93076 0.97075 1.02103 0.76567 0.75063 0.88995 0.91662 0.89754 0.90863 0.93094 0.92052 0.74926 0.90588 0.89809 0.89267 0.91142 0.91720 0.87434 0.89250 0.87492 0.88095 0.74882 1.23847 1.20551 0.79674 0.91691 0.90734 0.92601 0.92778 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 5.05 8.77 -173.53 -1.52 3.53 16 2 C 0.51 0.86 7.42 87.66 0.65 1.51 16 3 O -0.60 -7.74 16.82 -3.04 -0.05 -7.79 16 4 C -0.10 0.42 2.52 -11.54 -0.03 0.39 16 5 H 0.12 -0.85 8.14 -2.38 -0.02 -0.87 16 6 C -0.10 0.89 5.10 30.59 0.16 1.04 16 7 C -0.11 0.95 5.08 30.59 0.16 1.10 16 8 C -0.09 0.45 2.23 -10.79 -0.02 0.43 16 9 H 0.08 -0.41 8.14 -2.39 -0.02 -0.43 16 10 C 0.13 0.01 5.06 86.38 0.44 0.45 16 11 N -0.71 -0.48 5.28 -466.54 -2.46 -2.94 16 12 C 0.59 5.05 7.81 86.62 0.68 5.73 16 13 O -0.59 -9.60 15.33 -4.13 -0.06 -9.66 16 14 C -0.25 -1.72 6.28 -19.12 -0.12 -1.84 16 15 C 0.10 0.70 6.57 41.69 0.27 0.98 16 16 C -0.05 -0.31 5.33 30.08 0.16 -0.15 16 17 C -0.12 0.00 5.97 30.78 0.18 0.18 16 18 C -0.13 0.22 5.94 30.78 0.18 0.40 16 19 C 0.10 -0.01 6.22 86.41 0.54 0.53 16 20 N -0.43 -1.79 3.11 -493.16 -1.53 -3.32 16 21 C 0.02 0.03 6.18 40.99 0.25 0.29 16 22 C -0.06 0.22 2.99 71.24 0.21 0.43 16 23 O -0.56 1.66 9.97 -148.98 -1.49 0.17 16 24 Si 0.79 -4.09 31.11 68.60 2.13 -1.96 16 25 C -0.16 -0.08 9.09 23.64 0.21 0.13 16 26 C -0.11 0.32 5.20 30.59 0.16 0.48 16 27 C -0.10 0.00 4.49 30.59 0.14 0.13 16 28 H 0.40 -2.46 8.93 -92.71 -0.83 -3.29 16 29 H 0.42 -5.37 8.26 -92.71 -0.77 -6.14 16 30 H 0.09 -1.16 7.57 -2.38 -0.02 -1.18 16 31 H 0.06 -0.43 8.14 -2.39 -0.02 -0.45 16 32 H 0.08 -0.91 7.18 -2.39 -0.02 -0.93 16 33 H 0.07 -0.62 8.14 -2.39 -0.02 -0.64 16 34 H 0.05 0.19 8.14 -2.38 -0.02 0.17 16 35 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 36 H 0.41 -2.27 6.78 -92.71 -0.63 -2.90 16 37 H 0.08 0.56 8.14 -2.39 -0.02 0.54 16 38 H 0.08 0.74 7.39 -2.39 -0.02 0.72 16 39 H 0.09 -0.19 8.14 -2.39 -0.02 -0.21 16 40 H 0.07 -0.02 8.12 -2.38 -0.02 -0.03 16 41 H 0.06 0.04 8.11 -2.39 -0.02 0.02 16 42 H 0.11 -0.62 8.14 -2.39 -0.02 -0.64 16 43 H 0.09 -0.19 8.14 -2.39 -0.02 -0.21 16 44 H 0.11 0.02 5.94 -2.39 -0.01 0.00 16 45 H 0.10 -0.82 7.96 -2.39 -0.02 -0.84 16 46 H 0.40 -4.34 8.74 -74.05 -0.65 -4.99 16 47 H -0.31 -1.51 7.11 99.48 0.71 -0.80 16 48 H -0.28 0.51 7.11 99.48 0.71 1.22 16 49 H 0.19 -1.51 6.52 -2.91 -0.02 -1.53 16 50 H 0.06 -0.10 8.14 -2.38 -0.02 -0.12 16 51 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 52 H 0.06 0.18 8.10 -2.39 -0.02 0.16 16 53 H 0.05 0.20 8.10 -2.39 -0.02 0.18 16 Total: 0.00 -30.51 409.50 -2.64 -33.15 By element: Atomic # 1 Polarization: -21.52 SS G_CDS: -1.87 Total: -23.39 kcal Atomic # 6 Polarization: 7.98 SS G_CDS: 4.22 Total: 12.20 kcal Atomic # 7 Polarization: 2.79 SS G_CDS: -5.52 Total: -2.73 kcal Atomic # 8 Polarization: -15.68 SS G_CDS: -1.60 Total: -17.28 kcal Atomic # 14 Polarization: -4.09 SS G_CDS: 2.13 Total: -1.96 kcal Total: -30.51 -2.64 -33.15 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11352696_16915396.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.855 kcal (2) G-P(sol) polarization free energy of solvation -30.514 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.370 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.637 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.152 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.007 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds