Wall clock time and date at job start Sat Mar 6 2021 12:59:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34776 * 1 3 3 O 1.21282 * 119.99940 * 2 1 4 4 C 1.50698 * 120.00035 * 179.97438 * 2 1 3 5 5 H 1.08993 * 109.47304 * 300.00054 * 4 2 1 6 6 C 1.52999 * 109.46824 * 60.00862 * 4 2 1 7 7 C 1.52997 * 109.46991 * 179.97438 * 6 4 2 8 8 C 1.52996 * 109.47131 * 299.99311 * 7 6 4 9 9 H 1.08996 * 109.47452 * 300.00000 * 8 7 6 10 10 C 1.52997 * 109.47131 * 179.97438 * 8 7 6 11 11 N 1.46500 * 109.47170 * 65.00316 * 10 8 7 12 12 C 1.34777 * 120.00168 * 179.97438 * 11 10 8 13 13 O 1.21278 * 119.99916 * 0.02562 * 12 11 10 14 14 C 1.50698 * 119.99931 * 179.97438 * 12 11 10 15 15 O 1.42903 * 109.47067 * 179.97438 * 14 12 11 16 16 C 1.35898 * 117.00001 * 180.02562 * 15 14 12 17 17 C 1.38731 * 120.05786 * 359.72437 * 16 15 14 18 18 C 1.38148 * 119.94613 * 179.74114 * 17 16 15 19 19 C 1.38268 * 120.05364 * 0.51669 * 18 17 16 20 20 C 1.50694 * 119.94488 * 179.74249 * 19 18 17 21 21 O 1.42898 * 109.47392 * 245.02319 * 20 19 18 22 22 Si 1.86307 * 109.47148 * 5.02246 * 20 19 18 23 23 C 1.38266 * 120.11078 * 359.76403 * 19 18 17 24 24 C 1.38147 * 120.05669 * 359.97438 * 23 19 18 25 25 C 1.53002 * 109.46972 * 60.00459 * 8 7 6 26 26 C 1.52997 * 109.46817 * 299.99733 * 25 8 7 27 27 H 0.96998 * 119.99962 * 180.02562 * 1 2 3 28 28 H 0.97001 * 119.99863 * 0.02562 * 1 2 3 29 29 H 1.09002 * 109.46719 * 299.99679 * 6 4 2 30 30 H 1.08993 * 109.47839 * 59.99520 * 6 4 2 31 31 H 1.09001 * 109.47289 * 179.97438 * 7 6 4 32 32 H 1.09000 * 109.47611 * 59.99933 * 7 6 4 33 33 H 1.09000 * 109.47325 * 185.00280 * 10 8 7 34 34 H 1.09006 * 109.47500 * 305.00368 * 10 8 7 35 35 H 0.97004 * 120.00188 * 359.97438 * 11 10 8 36 36 H 1.09000 * 109.47697 * 299.99813 * 14 12 11 37 37 H 1.09002 * 109.47475 * 60.00444 * 14 12 11 38 38 H 1.08000 * 120.02499 * 359.97438 * 17 16 15 39 39 H 1.07998 * 119.97320 * 180.27818 * 18 17 16 40 40 H 1.09004 * 109.47258 * 125.01779 * 20 19 18 41 41 H 0.96698 * 114.00154 * 59.99312 * 21 20 19 42 42 H 1.48494 * 110.00021 * 180.02562 * 22 20 19 43 43 H 1.48505 * 109.99527 * 301.31916 * 22 20 19 44 44 H 1.07999 * 119.96851 * 179.97438 * 23 19 18 45 45 H 1.08002 * 120.02779 * 179.97438 * 24 23 19 46 46 H 1.09002 * 109.47070 * 179.97438 * 25 8 7 47 47 H 1.08996 * 109.47407 * 59.99513 * 25 8 7 48 48 H 1.09001 * 109.47502 * 300.00518 * 26 25 8 49 49 H 1.09001 * 109.47289 * 180.02562 * 26 25 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3051 0.0006 5 1 1.8380 -1.8762 0.8907 6 6 1.7318 -2.1078 -1.2484 7 6 2.4972 -3.4325 -1.2482 8 6 4.0013 -3.1524 -1.2486 9 1 4.2643 -2.5810 -2.1388 10 6 4.7668 -4.4771 -1.2477 11 7 4.5056 -5.1929 -2.4990 12 6 5.0788 -6.3922 -2.7216 13 8 5.8105 -6.8791 -1.8859 14 6 4.8096 -7.1287 -4.0085 15 8 5.5256 -8.3654 -4.0083 16 6 5.3912 -9.1563 -5.1052 17 6 4.5823 -8.7531 -6.1577 18 6 4.4516 -9.5564 -7.2740 19 6 5.1178 -10.7664 -7.3383 20 6 4.9688 -11.6434 -8.5547 21 8 4.3131 -12.8589 -8.1882 22 14 3.9555 -10.7545 -9.8408 23 6 5.9200 -11.1732 -6.2882 24 6 6.0582 -10.3710 -5.1720 25 6 4.3709 -2.3497 0.0004 26 6 3.6055 -1.0250 0.0002 27 1 -0.4850 -0.8400 0.0004 28 1 -0.4850 0.8401 -0.0004 29 1 0.6601 -2.3069 -1.2484 30 1 1.9950 -1.5366 -2.1386 31 1 2.2337 -4.0046 -2.1378 32 1 2.2343 -4.0040 -0.3581 33 1 5.8350 -4.2795 -1.1584 34 1 4.4383 -5.0861 -0.4054 35 1 3.9201 -4.8037 -3.1673 36 1 3.7414 -7.3269 -4.0973 37 1 5.1374 -6.5198 -4.8511 38 1 4.0582 -7.8102 -6.1060 39 1 3.8256 -9.2409 -8.0955 40 1 5.9542 -11.8705 -8.9617 41 1 3.4289 -12.7326 -7.8175 42 1 3.8009 -11.6092 -11.0453 43 1 2.6209 -10.4110 -9.2875 44 1 6.4389 -12.1189 -6.3406 45 1 6.6846 -10.6894 -4.3518 46 1 5.4426 -2.1505 0.0003 47 1 4.1079 -2.9211 0.8906 48 1 3.8683 -0.4535 -0.8900 49 1 3.8691 -0.4528 0.8897 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11352696_2989410.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 12:59:24 Heat of formation + Delta-G solvation = -130.776055 kcal Electronic energy + Delta-G solvation = -29570.863270 eV Core-core repulsion = 25270.908290 eV Total energy + Delta-G solvation = -4299.954979 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.177 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -41.61217 -41.24772 -40.55026 -39.26353 -38.77943 -37.23372 -35.91392 -34.76020 -32.84837 -32.31542 -31.89844 -31.77705 -29.87621 -27.17594 -26.17992 -24.17381 -23.95940 -23.48196 -22.38537 -21.74568 -21.38627 -20.77250 -19.55028 -18.66211 -18.50580 -18.18202 -17.66472 -17.56143 -17.08208 -16.84873 -16.62185 -16.32183 -16.08518 -15.86546 -15.66704 -15.54400 -15.24592 -15.11766 -14.86107 -14.74245 -14.65518 -14.32793 -14.01083 -13.74920 -13.60276 -13.50674 -13.45186 -13.39043 -13.04538 -12.40527 -12.29519 -12.26403 -12.14580 -12.13963 -11.91522 -11.63500 -11.60354 -11.31331 -10.93512 -10.81180 -10.71391 -10.59258 -10.24131 -10.06737 -9.25739 -4.99729 0.26094 0.27402 1.26507 1.40500 1.45507 1.54767 1.61411 1.93616 2.46715 2.51605 2.62514 3.35418 3.37752 3.39235 3.43034 3.49958 3.65675 3.70367 3.80915 3.83201 3.84240 3.85081 3.88607 4.00500 4.14573 4.23076 4.23848 4.26357 4.33001 4.40989 4.50503 4.50778 4.56283 4.62383 4.65527 4.78793 4.82752 4.90311 4.92712 4.99368 5.06847 5.12142 5.15425 5.22002 5.22923 5.32378 5.47861 5.65182 5.73772 6.18009 6.27243 6.32577 6.39940 7.04591 7.23544 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.857 5.857 2 C 0.519 3.481 3 O -0.541 6.541 4 C -0.109 4.109 5 H 0.100 0.900 6 C -0.110 4.110 7 C -0.114 4.114 8 C -0.101 4.101 9 H 0.081 0.919 10 C 0.124 3.876 11 N -0.727 5.727 12 C 0.515 3.485 13 O -0.512 6.512 14 C 0.040 3.960 15 O -0.288 6.288 16 C 0.135 3.865 17 C -0.207 4.207 18 C -0.077 4.077 19 C -0.155 4.155 20 C -0.070 4.070 21 O -0.530 6.530 22 Si 0.684 3.316 23 C -0.050 4.050 24 C -0.145 4.145 25 C -0.112 4.112 26 C -0.099 4.099 27 H 0.401 0.599 28 H 0.402 0.598 29 H 0.069 0.931 30 H 0.070 0.930 31 H 0.067 0.933 32 H 0.070 0.930 33 H 0.073 0.927 34 H 0.072 0.928 35 H 0.402 0.598 36 H 0.094 0.906 37 H 0.096 0.904 38 H 0.131 0.869 39 H 0.130 0.870 40 H 0.118 0.882 41 H 0.375 0.625 42 H -0.258 1.258 43 H -0.261 1.261 44 H 0.134 0.866 45 H 0.136 0.864 46 H 0.073 0.927 47 H 0.069 0.931 48 H 0.072 0.928 49 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.084 2.195 -2.346 6.014 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.420 5.420 2 C 0.304 3.696 3 O -0.417 6.417 4 C -0.130 4.130 5 H 0.118 0.882 6 C -0.148 4.148 7 C -0.152 4.152 8 C -0.120 4.120 9 H 0.100 0.900 10 C 0.001 3.999 11 N -0.382 5.382 12 C 0.299 3.701 13 O -0.385 6.385 14 C -0.039 4.039 15 O -0.200 6.200 16 C 0.089 3.911 17 C -0.225 4.225 18 C -0.094 4.094 19 C -0.156 4.156 20 C -0.180 4.180 21 O -0.336 6.336 22 Si 0.586 3.414 23 C -0.068 4.068 24 C -0.164 4.164 25 C -0.150 4.150 26 C -0.137 4.137 27 H 0.229 0.771 28 H 0.232 0.768 29 H 0.087 0.913 30 H 0.089 0.911 31 H 0.085 0.915 32 H 0.089 0.911 33 H 0.091 0.909 34 H 0.090 0.910 35 H 0.236 0.764 36 H 0.112 0.888 37 H 0.114 0.886 38 H 0.149 0.851 39 H 0.147 0.853 40 H 0.135 0.865 41 H 0.223 0.777 42 H -0.183 1.183 43 H -0.187 1.187 44 H 0.152 0.848 45 H 0.154 0.846 46 H 0.092 0.908 47 H 0.088 0.912 48 H 0.091 0.909 49 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -4.026 2.111 -2.247 5.071 hybrid contribution -1.690 -0.357 0.362 1.765 sum -5.716 1.754 -1.885 6.269 Atomic orbital electron populations 1.43940 1.07388 1.12586 1.78131 1.20725 0.82619 0.91514 0.74777 1.90773 1.68193 1.33763 1.48962 1.21393 0.96968 0.93859 1.00821 0.88244 1.21531 1.00227 0.96066 0.96983 1.21618 0.94052 0.96748 1.02764 1.21466 0.95161 0.95153 1.00223 0.90029 1.21478 1.00551 0.92035 0.85793 1.45830 1.50753 1.20061 1.21526 1.20018 0.80684 0.81450 0.87964 1.90797 1.35439 1.66387 1.45921 1.22476 0.98096 0.85843 0.97480 1.86177 1.66586 1.29506 1.37750 1.19085 0.95012 0.91086 0.85908 1.21165 1.03879 1.02368 0.95121 1.20833 0.97980 0.93522 0.97115 1.20187 1.01070 0.96436 0.97875 1.24956 1.04006 0.89198 0.99868 1.86606 1.33966 1.29282 1.83792 0.95063 0.81456 0.86368 0.78526 1.20871 0.95882 0.98695 0.91394 1.20543 1.02809 0.92863 1.00185 1.21532 1.00735 0.95668 0.97113 1.21342 0.91556 0.96912 1.03920 0.77050 0.76754 0.91254 0.91093 0.91462 0.91111 0.90903 0.90963 0.76371 0.88798 0.88644 0.85092 0.85270 0.86453 0.77703 1.18262 1.18653 0.84774 0.84615 0.90831 0.91240 0.90931 0.90753 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.86 2.63 8.77 31.22 0.27 2.91 16 2 C 0.52 0.07 7.42 -10.99 -0.08 -0.01 16 3 O -0.54 -2.74 16.82 5.56 0.09 -2.65 16 4 C -0.11 0.28 2.53 -91.77 -0.23 0.05 16 5 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 6 C -0.11 0.47 5.10 -26.73 -0.14 0.34 16 7 C -0.11 0.54 5.08 -26.73 -0.14 0.41 16 8 C -0.10 0.40 2.23 -90.62 -0.20 0.19 16 9 H 0.08 -0.32 8.14 -51.93 -0.42 -0.75 16 10 C 0.12 -0.27 5.06 -4.04 -0.02 -0.29 16 11 N -0.73 1.99 5.28 -60.29 -0.32 1.67 16 12 C 0.51 0.34 7.91 -10.99 -0.09 0.25 16 13 O -0.51 -3.05 16.50 -14.35 -0.24 -3.28 16 14 C 0.04 -0.06 5.22 36.00 0.19 0.12 16 15 O -0.29 -0.68 9.67 -39.33 -0.38 -1.06 16 16 C 0.13 0.18 6.69 -39.22 -0.26 -0.09 16 17 C -0.21 0.16 9.04 -39.43 -0.36 -0.19 16 18 C -0.08 0.07 8.66 -39.60 -0.34 -0.28 16 19 C -0.16 0.01 5.35 -104.60 -0.56 -0.55 16 20 C -0.07 0.03 2.80 36.00 0.10 0.13 16 21 O -0.53 -0.60 12.83 -35.23 -0.45 -1.05 16 22 Si 0.68 -0.93 29.88 -169.99 -5.08 -6.01 16 23 C -0.05 -0.03 9.68 -39.60 -0.38 -0.41 16 24 C -0.15 -0.21 9.99 -39.43 -0.39 -0.60 16 25 C -0.11 0.33 5.20 -26.73 -0.14 0.19 16 26 C -0.10 0.14 4.49 -26.73 -0.12 0.02 16 27 H 0.40 -2.39 8.25 -40.82 -0.34 -2.73 16 28 H 0.40 -1.30 8.93 -40.82 -0.36 -1.66 16 29 H 0.07 -0.38 7.56 -51.93 -0.39 -0.77 16 30 H 0.07 -0.24 8.14 -51.93 -0.42 -0.67 16 31 H 0.07 -0.38 7.18 -51.93 -0.37 -0.75 16 32 H 0.07 -0.31 8.14 -51.93 -0.42 -0.73 16 33 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 34 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 35 H 0.40 -2.35 7.65 -40.82 -0.31 -2.66 16 36 H 0.09 -0.40 7.65 -51.93 -0.40 -0.79 16 37 H 0.10 -0.40 7.67 -51.93 -0.40 -0.80 16 38 H 0.13 -0.47 6.30 -52.49 -0.33 -0.80 16 39 H 0.13 -0.35 4.83 -52.49 -0.25 -0.60 16 40 H 0.12 -0.13 7.96 -51.93 -0.41 -0.54 16 41 H 0.38 -0.63 8.70 45.56 0.40 -0.23 16 42 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 43 H -0.26 -0.09 7.01 56.52 0.40 0.31 16 44 H 0.13 -0.03 8.06 -52.49 -0.42 -0.45 16 45 H 0.14 0.14 8.06 -52.49 -0.42 -0.28 16 46 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 47 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 48 H 0.07 -0.01 8.10 -51.93 -0.42 -0.44 16 49 H 0.07 0.00 8.10 -51.93 -0.42 -0.42 16 LS Contribution 396.45 15.07 5.97 5.97 Total: 0.00 -12.42 396.45 -10.74 -23.16 By element: Atomic # 1 Polarization: -11.51 SS G_CDS: -7.45 Total: -18.96 kcal Atomic # 6 Polarization: 2.46 SS G_CDS: -3.16 Total: -0.71 kcal Atomic # 7 Polarization: 4.62 SS G_CDS: -0.04 Total: 4.58 kcal Atomic # 8 Polarization: -7.06 SS G_CDS: -0.98 Total: -8.03 kcal Atomic # 14 Polarization: -0.93 SS G_CDS: -5.08 Total: -6.01 kcal Total LS contribution 5.97 Total: 5.97 kcal Total: -12.42 -10.74 -23.16 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11352696_2989410.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -107.621 kcal (2) G-P(sol) polarization free energy of solvation -12.418 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.039 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.738 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.155 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.776 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds