Wall clock time and date at job start Sat Mar 6 2021 12:59:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34776 * 1 3 3 O 1.21282 * 119.99940 * 2 1 4 4 C 1.50698 * 120.00035 * 179.97438 * 2 1 3 5 5 H 1.08993 * 109.47304 * 300.00054 * 4 2 1 6 6 C 1.52999 * 109.46824 * 60.00862 * 4 2 1 7 7 C 1.52997 * 109.46991 * 179.97438 * 6 4 2 8 8 C 1.52996 * 109.47131 * 299.99311 * 7 6 4 9 9 H 1.08996 * 109.47452 * 300.00000 * 8 7 6 10 10 C 1.52997 * 109.47131 * 179.97438 * 8 7 6 11 11 N 1.46500 * 109.47170 * 65.00316 * 10 8 7 12 12 C 1.34777 * 120.00168 * 179.97438 * 11 10 8 13 13 O 1.21278 * 119.99916 * 0.02562 * 12 11 10 14 14 C 1.50698 * 119.99931 * 179.97438 * 12 11 10 15 15 O 1.42903 * 109.47067 * 179.97438 * 14 12 11 16 16 C 1.35898 * 117.00001 * 180.02562 * 15 14 12 17 17 C 1.38731 * 120.05786 * 359.72437 * 16 15 14 18 18 C 1.38148 * 119.94613 * 179.74114 * 17 16 15 19 19 C 1.38268 * 120.05364 * 0.51669 * 18 17 16 20 20 C 1.50694 * 119.94488 * 179.74249 * 19 18 17 21 21 O 1.42898 * 109.47392 * 245.02319 * 20 19 18 22 22 Si 1.86307 * 109.47148 * 5.02246 * 20 19 18 23 23 C 1.38266 * 120.11078 * 359.76403 * 19 18 17 24 24 C 1.38147 * 120.05669 * 359.97438 * 23 19 18 25 25 C 1.53002 * 109.46972 * 60.00459 * 8 7 6 26 26 C 1.52997 * 109.46817 * 299.99733 * 25 8 7 27 27 H 0.96998 * 119.99962 * 180.02562 * 1 2 3 28 28 H 0.97001 * 119.99863 * 0.02562 * 1 2 3 29 29 H 1.09002 * 109.46719 * 299.99679 * 6 4 2 30 30 H 1.08993 * 109.47839 * 59.99520 * 6 4 2 31 31 H 1.09001 * 109.47289 * 179.97438 * 7 6 4 32 32 H 1.09000 * 109.47611 * 59.99933 * 7 6 4 33 33 H 1.09000 * 109.47325 * 185.00280 * 10 8 7 34 34 H 1.09006 * 109.47500 * 305.00368 * 10 8 7 35 35 H 0.97004 * 120.00188 * 359.97438 * 11 10 8 36 36 H 1.09000 * 109.47697 * 299.99813 * 14 12 11 37 37 H 1.09002 * 109.47475 * 60.00444 * 14 12 11 38 38 H 1.08000 * 120.02499 * 359.97438 * 17 16 15 39 39 H 1.07998 * 119.97320 * 180.27818 * 18 17 16 40 40 H 1.09004 * 109.47258 * 125.01779 * 20 19 18 41 41 H 0.96698 * 114.00154 * 59.99312 * 21 20 19 42 42 H 1.48494 * 110.00021 * 180.02562 * 22 20 19 43 43 H 1.48505 * 109.99527 * 301.31916 * 22 20 19 44 44 H 1.07999 * 119.96851 * 179.97438 * 23 19 18 45 45 H 1.08002 * 120.02779 * 179.97438 * 24 23 19 46 46 H 1.09002 * 109.47070 * 179.97438 * 25 8 7 47 47 H 1.08996 * 109.47407 * 59.99513 * 25 8 7 48 48 H 1.09001 * 109.47502 * 300.00518 * 26 25 8 49 49 H 1.09001 * 109.47289 * 180.02562 * 26 25 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3051 0.0006 5 1 1.8380 -1.8762 0.8907 6 6 1.7318 -2.1078 -1.2484 7 6 2.4972 -3.4325 -1.2482 8 6 4.0013 -3.1524 -1.2486 9 1 4.2643 -2.5810 -2.1388 10 6 4.7668 -4.4771 -1.2477 11 7 4.5056 -5.1929 -2.4990 12 6 5.0788 -6.3922 -2.7216 13 8 5.8105 -6.8791 -1.8859 14 6 4.8096 -7.1287 -4.0085 15 8 5.5256 -8.3654 -4.0083 16 6 5.3912 -9.1563 -5.1052 17 6 4.5823 -8.7531 -6.1577 18 6 4.4516 -9.5564 -7.2740 19 6 5.1178 -10.7664 -7.3383 20 6 4.9688 -11.6434 -8.5547 21 8 4.3131 -12.8589 -8.1882 22 14 3.9555 -10.7545 -9.8408 23 6 5.9200 -11.1732 -6.2882 24 6 6.0582 -10.3710 -5.1720 25 6 4.3709 -2.3497 0.0004 26 6 3.6055 -1.0250 0.0002 27 1 -0.4850 -0.8400 0.0004 28 1 -0.4850 0.8401 -0.0004 29 1 0.6601 -2.3069 -1.2484 30 1 1.9950 -1.5366 -2.1386 31 1 2.2337 -4.0046 -2.1378 32 1 2.2343 -4.0040 -0.3581 33 1 5.8350 -4.2795 -1.1584 34 1 4.4383 -5.0861 -0.4054 35 1 3.9201 -4.8037 -3.1673 36 1 3.7414 -7.3269 -4.0973 37 1 5.1374 -6.5198 -4.8511 38 1 4.0582 -7.8102 -6.1060 39 1 3.8256 -9.2409 -8.0955 40 1 5.9542 -11.8705 -8.9617 41 1 3.4289 -12.7326 -7.8175 42 1 3.8009 -11.6092 -11.0453 43 1 2.6209 -10.4110 -9.2875 44 1 6.4389 -12.1189 -6.3406 45 1 6.6846 -10.6894 -4.3518 46 1 5.4426 -2.1505 0.0003 47 1 4.1079 -2.9211 0.8906 48 1 3.8683 -0.4535 -0.8900 49 1 3.8691 -0.4528 0.8897 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11352696_2989410.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 12:59:23 Heat of formation + Delta-G solvation = -136.207789 kcal Electronic energy + Delta-G solvation = -29571.098808 eV Core-core repulsion = 25270.908290 eV Total energy + Delta-G solvation = -4300.190517 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.177 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -41.57069 -41.16192 -40.55475 -39.20152 -38.74412 -37.23304 -35.89508 -34.71201 -32.73633 -32.23577 -31.73243 -31.64838 -29.75945 -27.04277 -26.11970 -24.10704 -23.69576 -23.38479 -22.34653 -21.65857 -21.24103 -20.59715 -19.48578 -18.56685 -18.41462 -18.13838 -17.60787 -17.47013 -17.06768 -16.79424 -16.48604 -16.26727 -16.04278 -15.80387 -15.59051 -15.46375 -15.09914 -14.98577 -14.79140 -14.66021 -14.57826 -14.35207 -13.87709 -13.72243 -13.51095 -13.45005 -13.35120 -13.16068 -12.89005 -12.29627 -12.17635 -12.10692 -12.05949 -12.03914 -11.76250 -11.59129 -11.38874 -11.09101 -10.97001 -10.79976 -10.64223 -10.56451 -10.17852 -10.02430 -9.22917 -4.89176 0.28570 0.32303 1.35023 1.46760 1.51634 1.61675 1.64011 1.99728 2.61761 2.63779 2.65976 3.46497 3.55393 3.60388 3.64945 3.74331 3.76393 3.84486 3.95619 4.01107 4.05798 4.10399 4.13203 4.23385 4.32192 4.41942 4.44046 4.48188 4.49157 4.56213 4.57014 4.68787 4.70966 4.78420 4.87894 4.98672 5.03455 5.13203 5.16460 5.17293 5.22457 5.26893 5.27969 5.32847 5.38348 5.51043 5.54282 5.71069 5.89055 6.27969 6.47185 6.48623 6.52248 7.14597 7.35477 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.840 5.840 2 C 0.513 3.487 3 O -0.600 6.600 4 C -0.104 4.104 5 H 0.116 0.884 6 C -0.104 4.104 7 C -0.111 4.111 8 C -0.090 4.090 9 H 0.087 0.913 10 C 0.126 3.874 11 N -0.706 5.706 12 C 0.511 3.489 13 O -0.576 6.576 14 C 0.036 3.964 15 O -0.321 6.321 16 C 0.122 3.878 17 C -0.199 4.199 18 C -0.077 4.077 19 C -0.158 4.158 20 C -0.083 4.083 21 O -0.552 6.552 22 Si 0.772 3.228 23 C -0.060 4.060 24 C -0.167 4.167 25 C -0.109 4.109 26 C -0.097 4.097 27 H 0.418 0.582 28 H 0.404 0.596 29 H 0.090 0.910 30 H 0.064 0.936 31 H 0.085 0.915 32 H 0.073 0.927 33 H 0.055 0.945 34 H 0.062 0.938 35 H 0.421 0.579 36 H 0.127 0.873 37 H 0.128 0.872 38 H 0.166 0.834 39 H 0.152 0.848 40 H 0.120 0.880 41 H 0.386 0.614 42 H -0.309 1.309 43 H -0.275 1.275 44 H 0.133 0.867 45 H 0.125 0.875 46 H 0.066 0.934 47 H 0.073 0.927 48 H 0.056 0.944 49 H 0.053 0.947 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.286 2.567 -3.718 8.573 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.403 5.403 2 C 0.299 3.701 3 O -0.480 6.480 4 C -0.125 4.125 5 H 0.134 0.866 6 C -0.142 4.142 7 C -0.148 4.148 8 C -0.109 4.109 9 H 0.105 0.895 10 C 0.003 3.997 11 N -0.361 5.361 12 C 0.297 3.703 13 O -0.455 6.455 14 C -0.042 4.042 15 O -0.234 6.234 16 C 0.076 3.924 17 C -0.218 4.218 18 C -0.094 4.094 19 C -0.159 4.159 20 C -0.191 4.191 21 O -0.360 6.360 22 Si 0.678 3.322 23 C -0.078 4.078 24 C -0.186 4.186 25 C -0.147 4.147 26 C -0.136 4.136 27 H 0.249 0.751 28 H 0.234 0.766 29 H 0.108 0.892 30 H 0.083 0.917 31 H 0.104 0.896 32 H 0.091 0.909 33 H 0.074 0.926 34 H 0.080 0.920 35 H 0.259 0.741 36 H 0.145 0.855 37 H 0.145 0.855 38 H 0.183 0.817 39 H 0.170 0.830 40 H 0.138 0.862 41 H 0.235 0.765 42 H -0.237 1.237 43 H -0.202 1.202 44 H 0.151 0.849 45 H 0.143 0.857 46 H 0.085 0.915 47 H 0.092 0.908 48 H 0.075 0.925 49 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges -6.294 2.494 -3.620 7.677 hybrid contribution -1.040 -0.474 0.800 1.395 sum -7.334 2.021 -2.820 8.113 Atomic orbital electron populations 1.43841 1.06529 1.13676 1.76283 1.21223 0.83433 0.91617 0.73817 1.90747 1.69488 1.35833 1.51969 1.21410 0.95558 0.92898 1.02680 0.86597 1.21526 1.01547 0.95676 0.95475 1.21619 0.92738 0.96647 1.03818 1.21362 0.95899 0.93833 0.99790 0.89481 1.21402 0.99831 0.92661 0.85809 1.45680 1.49889 1.18929 1.21606 1.20563 0.79714 0.81890 0.88164 1.90772 1.38485 1.68111 1.48145 1.22768 0.99704 0.84811 0.96890 1.86133 1.67714 1.31012 1.38529 1.19216 0.95722 0.90981 0.86442 1.21498 1.02880 1.03439 0.93955 1.21103 0.97649 0.92931 0.97750 1.20274 1.01017 0.96999 0.97594 1.25245 1.04670 0.88962 1.00267 1.86574 1.34921 1.30420 1.84082 0.94092 0.79301 0.84444 0.74396 1.20919 0.96478 0.98762 0.91670 1.20625 1.03658 0.93884 1.00418 1.21488 1.00179 0.95067 0.97998 1.21270 0.92969 0.97140 1.02181 0.75091 0.76556 0.89170 0.91674 0.89600 0.90878 0.92630 0.91963 0.74107 0.85513 0.85482 0.81696 0.83050 0.86223 0.76531 1.23728 1.20154 0.84918 0.85651 0.91499 0.90831 0.92483 0.92821 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 5.83 8.77 -173.53 -1.52 4.31 16 2 C 0.51 0.26 7.42 87.66 0.65 0.92 16 3 O -0.60 -7.08 16.82 -3.04 -0.05 -7.13 16 4 C -0.10 0.58 2.53 -11.54 -0.03 0.55 16 5 H 0.12 -1.01 8.14 -2.39 -0.02 -1.03 16 6 C -0.10 1.10 5.10 30.59 0.16 1.25 16 7 C -0.11 1.30 5.08 30.59 0.16 1.45 16 8 C -0.09 0.77 2.23 -10.79 -0.02 0.75 16 9 H 0.09 -0.79 8.14 -2.39 -0.02 -0.81 16 10 C 0.13 -0.56 5.06 86.38 0.44 -0.12 16 11 N -0.71 4.72 5.28 -463.06 -2.45 2.28 16 12 C 0.51 0.52 7.91 87.66 0.69 1.21 16 13 O -0.58 -7.80 16.50 16.01 0.26 -7.53 16 14 C 0.04 -0.18 5.22 71.24 0.37 0.19 16 15 O -0.32 -1.53 9.67 -73.37 -0.71 -2.24 16 16 C 0.12 0.29 6.69 22.51 0.15 0.44 16 17 C -0.20 0.76 9.04 22.37 0.20 0.97 16 18 C -0.08 0.29 8.66 22.26 0.19 0.48 16 19 C -0.16 0.10 5.35 -19.85 -0.11 -0.01 16 20 C -0.08 0.10 2.80 71.23 0.20 0.30 16 21 O -0.55 -1.33 12.83 -148.98 -1.91 -3.24 16 22 Si 0.77 -2.93 29.88 68.60 2.05 -0.88 16 23 C -0.06 -0.13 9.68 22.25 0.22 0.09 16 24 C -0.17 -0.69 9.99 22.37 0.22 -0.47 16 25 C -0.11 0.59 5.20 30.59 0.16 0.75 16 26 C -0.10 0.18 4.49 30.60 0.14 0.31 16 27 H 0.42 -5.75 8.25 -92.71 -0.76 -6.52 16 28 H 0.40 -2.78 8.93 -92.71 -0.83 -3.61 16 29 H 0.09 -1.28 7.56 -2.39 -0.02 -1.29 16 30 H 0.06 -0.55 8.14 -2.39 -0.02 -0.57 16 31 H 0.09 -1.27 7.18 -2.39 -0.02 -1.29 16 32 H 0.07 -0.81 8.14 -2.39 -0.02 -0.83 16 33 H 0.06 -0.03 8.14 -2.39 -0.02 -0.04 16 34 H 0.06 -0.11 8.14 -2.38 -0.02 -0.13 16 35 H 0.42 -6.07 7.65 -92.71 -0.71 -6.78 16 36 H 0.13 -1.50 7.65 -2.39 -0.02 -1.52 16 37 H 0.13 -1.47 7.67 -2.39 -0.02 -1.49 16 38 H 0.17 -1.89 6.30 -2.91 -0.02 -1.90 16 39 H 0.15 -1.30 4.83 -2.91 -0.01 -1.31 16 40 H 0.12 -0.26 7.96 -2.39 -0.02 -0.28 16 41 H 0.39 -1.31 8.70 -74.06 -0.64 -1.96 16 42 H -0.31 -1.49 7.11 99.48 0.71 -0.78 16 43 H -0.28 0.39 7.01 99.48 0.70 1.09 16 44 H 0.13 0.17 8.06 -2.91 -0.02 0.14 16 45 H 0.13 0.61 8.06 -2.91 -0.02 0.59 16 46 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 47 H 0.07 -0.44 8.14 -2.39 -0.02 -0.46 16 48 H 0.06 0.07 8.10 -2.39 -0.02 0.05 16 49 H 0.05 0.12 8.10 -2.39 -0.02 0.10 16 Total: 0.00 -33.86 396.45 -2.45 -36.31 By element: Atomic # 1 Polarization: -29.04 SS G_CDS: -1.91 Total: -30.94 kcal Atomic # 6 Polarization: 5.28 SS G_CDS: 3.79 Total: 9.07 kcal Atomic # 7 Polarization: 10.56 SS G_CDS: -3.97 Total: 6.59 kcal Atomic # 8 Polarization: -17.74 SS G_CDS: -2.41 Total: -20.15 kcal Atomic # 14 Polarization: -2.93 SS G_CDS: 2.05 Total: -0.88 kcal Total: -33.86 -2.45 -36.31 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11352696_2989410.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.902 kcal (2) G-P(sol) polarization free energy of solvation -33.857 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.760 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.448 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.305 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.208 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds