Wall clock time and date at job start Sat Mar 6 2021 13:00:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34777 * 1 3 3 O 1.21278 * 120.00191 * 2 1 4 4 C 1.50703 * 119.99991 * 179.97438 * 2 1 3 5 5 H 1.09002 * 109.47152 * 300.00060 * 4 2 1 6 6 C 1.53000 * 109.46912 * 60.00288 * 4 2 1 7 7 C 1.53001 * 109.46886 * 180.02562 * 6 4 2 8 8 C 1.53002 * 109.46963 * 299.99499 * 7 6 4 9 9 H 1.09002 * 109.47067 * 300.00341 * 8 7 6 10 10 C 1.53002 * 109.47454 * 180.02562 * 8 7 6 11 11 N 1.46504 * 109.46806 * 64.99922 * 10 8 7 12 12 C 1.34779 * 119.99794 * 180.02562 * 11 10 8 13 13 O 1.21279 * 119.99730 * 359.97438 * 12 11 10 14 14 C 1.50694 * 120.00067 * 180.02562 * 12 11 10 15 15 O 1.42898 * 109.47227 * 180.02562 * 14 12 11 16 16 C 1.35903 * 117.00058 * 179.97438 * 15 14 12 17 17 C 1.38711 * 120.05550 * 179.72079 * 16 15 14 18 18 C 1.38166 * 119.94084 * 179.76572 * 17 16 15 19 19 C 1.50708 * 119.96877 * 180.23394 * 18 17 16 20 20 O 1.42901 * 109.46811 * 65.25512 * 19 18 17 21 21 Si 1.86301 * 109.46782 * 185.25641 * 19 18 17 22 22 C 1.38241 * 120.05663 * 0.48713 * 18 17 16 23 23 C 1.38278 * 120.11095 * 359.76928 * 22 18 17 24 24 C 1.38122 * 120.06004 * 0.02562 * 23 22 18 25 25 C 1.52997 * 109.47092 * 60.00194 * 8 7 6 26 26 C 1.53002 * 109.46966 * 180.02562 * 4 2 1 27 27 H 0.96998 * 120.00094 * 179.97438 * 1 2 3 28 28 H 0.97004 * 119.99532 * 0.02562 * 1 2 3 29 29 H 1.09001 * 109.47194 * 299.99742 * 6 4 2 30 30 H 1.08992 * 109.47399 * 59.99914 * 6 4 2 31 31 H 1.09000 * 109.47437 * 180.02562 * 7 6 4 32 32 H 1.09002 * 109.47508 * 59.99571 * 7 6 4 33 33 H 1.08998 * 109.47254 * 185.00083 * 10 8 7 34 34 H 1.09000 * 109.46519 * 305.00454 * 10 8 7 35 35 H 0.96991 * 119.99936 * 0.02562 * 11 10 8 36 36 H 1.09008 * 109.46908 * 299.99632 * 14 12 11 37 37 H 1.09000 * 109.47169 * 59.99378 * 14 12 11 38 38 H 1.07998 * 120.02643 * 359.97438 * 17 16 15 39 39 H 1.09002 * 109.46604 * 305.25186 * 19 18 17 40 40 H 0.96692 * 114.00384 * 60.00580 * 20 19 18 41 41 H 1.48499 * 110.00030 * 58.68000 * 21 19 18 42 42 H 1.48500 * 109.99659 * 180.02562 * 21 19 18 43 43 H 1.08004 * 119.94197 * 179.74361 * 22 18 17 44 44 H 1.08009 * 119.97551 * 179.97438 * 23 22 18 45 45 H 1.08004 * 120.03239 * 179.97438 * 24 23 22 46 46 H 1.09001 * 109.47375 * 180.02562 * 25 8 7 47 47 H 1.09002 * 109.47497 * 59.99850 * 25 8 7 48 48 H 1.09002 * 109.47075 * 299.99352 * 26 4 2 49 49 H 1.08996 * 109.47407 * 60.00310 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3051 0.0006 5 1 1.8379 -1.8763 0.8908 6 6 1.7317 -2.1079 -1.2484 7 6 2.4962 -3.4332 -1.2474 8 6 4.0006 -3.1541 -1.2473 9 1 4.2642 -2.5831 -2.1375 10 6 4.7652 -4.4794 -1.2470 11 7 4.5037 -5.1942 -2.4988 12 6 5.0754 -6.3943 -2.7216 13 8 5.8066 -6.8821 -1.8859 14 6 4.8070 -7.1293 -4.0094 15 8 5.5201 -8.3677 -4.0086 16 6 5.3851 -9.1581 -5.1059 17 6 6.0538 -10.3714 -5.1746 18 6 5.9111 -11.1753 -6.2892 19 6 6.6332 -12.4961 -6.3622 20 8 6.1258 -13.3727 -5.3542 21 14 6.3649 -13.2584 -8.0408 22 6 5.1106 -10.7668 -7.3396 23 6 4.4471 -9.5553 -7.2758 24 6 4.5831 -8.7498 -6.1620 25 6 4.3702 -2.3513 0.0016 26 6 3.6055 -1.0255 0.0011 27 1 -0.4850 -0.8400 -0.0004 28 1 -0.4850 0.8401 -0.0004 29 1 0.6600 -2.3071 -1.2483 30 1 1.9950 -1.5368 -2.1385 31 1 2.2333 -4.0050 -2.1374 32 1 2.2325 -4.0042 -0.3572 33 1 5.8335 -4.2825 -1.1573 34 1 4.4360 -5.0885 -0.4052 35 1 3.9192 -4.8039 -3.1672 36 1 3.7385 -7.3258 -4.0997 37 1 5.1367 -6.5202 -4.8510 38 1 6.6829 -10.6889 -4.3561 39 1 7.6995 -12.3365 -6.2019 40 1 5.1805 -13.5596 -5.4350 41 1 6.8595 -12.3422 -9.0997 42 1 7.0716 -14.5618 -8.1255 43 1 5.0036 -11.3948 -8.2118 44 1 3.8225 -9.2381 -8.0979 45 1 4.0649 -7.8035 -6.1128 46 1 5.4418 -2.1521 0.0015 47 1 4.1065 -2.9222 0.8919 48 1 3.8692 -0.4542 -0.8890 49 1 3.8685 -0.4538 0.8910 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11352696_4860298.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:00:18 Heat of formation + Delta-G solvation = -137.428808 kcal Electronic energy + Delta-G solvation = -29608.155094 eV Core-core repulsion = 25307.911629 eV Total energy + Delta-G solvation = -4300.243464 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.177 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -41.58686 -41.16942 -40.57273 -39.17251 -38.72197 -37.22750 -35.91903 -34.71776 -32.70083 -32.44613 -31.68654 -31.53083 -29.50183 -27.10945 -26.58435 -23.71953 -23.67004 -23.60549 -22.46081 -21.61451 -21.22079 -20.60385 -19.31174 -18.57910 -18.38315 -17.76293 -17.58459 -17.49597 -17.26797 -16.95198 -16.53860 -16.43707 -16.17800 -15.81579 -15.55963 -15.35873 -15.09438 -14.95162 -14.82649 -14.70495 -14.58900 -14.18549 -14.00983 -13.87876 -13.48193 -13.37772 -13.17119 -12.92581 -12.90115 -12.60008 -12.19094 -12.12881 -12.06399 -12.01139 -11.77883 -11.67528 -11.40126 -11.10793 -10.99120 -10.80789 -10.64631 -10.48621 -10.20652 -9.93221 -9.27792 -4.98755 0.21361 0.39739 1.28368 1.43542 1.51256 1.63507 1.66466 1.98150 2.60320 2.62656 2.68122 3.50616 3.55817 3.59061 3.63867 3.68802 3.74085 3.86105 3.99521 4.01160 4.07944 4.11272 4.13948 4.22102 4.25828 4.35183 4.41101 4.46813 4.47790 4.49860 4.55840 4.64454 4.67083 4.76413 4.86865 4.98422 5.02011 5.12178 5.15102 5.21178 5.25228 5.26739 5.30780 5.36832 5.37891 5.45697 5.52922 5.70692 5.88776 6.27773 6.46613 6.46932 6.75573 7.11802 7.35155 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.840 5.840 2 C 0.513 3.487 3 O -0.600 6.600 4 C -0.104 4.104 5 H 0.117 0.883 6 C -0.104 4.104 7 C -0.111 4.111 8 C -0.090 4.090 9 H 0.086 0.914 10 C 0.126 3.874 11 N -0.706 5.706 12 C 0.510 3.490 13 O -0.577 6.577 14 C 0.038 3.962 15 O -0.325 6.325 16 C 0.113 3.887 17 C -0.152 4.152 18 C -0.085 4.085 19 C -0.087 4.087 20 O -0.558 6.558 21 Si 0.796 3.204 22 C -0.156 4.156 23 C -0.070 4.070 24 C -0.202 4.202 25 C -0.109 4.109 26 C -0.097 4.097 27 H 0.418 0.582 28 H 0.404 0.596 29 H 0.091 0.909 30 H 0.064 0.936 31 H 0.086 0.914 32 H 0.073 0.927 33 H 0.054 0.946 34 H 0.063 0.937 35 H 0.421 0.579 36 H 0.129 0.871 37 H 0.124 0.876 38 H 0.109 0.891 39 H 0.099 0.901 40 H 0.396 0.604 41 H -0.281 1.281 42 H -0.302 1.302 43 H 0.152 0.848 44 H 0.165 0.835 45 H 0.162 0.838 46 H 0.065 0.935 47 H 0.074 0.926 48 H 0.056 0.944 49 H 0.053 0.947 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.406 0.328 -5.832 12.815 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.403 5.403 2 C 0.299 3.701 3 O -0.481 6.481 4 C -0.126 4.126 5 H 0.134 0.866 6 C -0.142 4.142 7 C -0.148 4.148 8 C -0.109 4.109 9 H 0.104 0.896 10 C 0.003 3.997 11 N -0.360 5.360 12 C 0.296 3.704 13 O -0.456 6.456 14 C -0.040 4.040 15 O -0.238 6.238 16 C 0.068 3.932 17 C -0.171 4.171 18 C -0.086 4.086 19 C -0.195 4.195 20 O -0.366 6.366 21 Si 0.701 3.299 22 C -0.173 4.173 23 C -0.087 4.087 24 C -0.220 4.220 25 C -0.147 4.147 26 C -0.136 4.136 27 H 0.249 0.751 28 H 0.235 0.765 29 H 0.109 0.891 30 H 0.083 0.917 31 H 0.104 0.896 32 H 0.092 0.908 33 H 0.073 0.927 34 H 0.081 0.919 35 H 0.259 0.741 36 H 0.147 0.853 37 H 0.142 0.858 38 H 0.127 0.873 39 H 0.116 0.884 40 H 0.246 0.754 41 H -0.208 1.208 42 H -0.230 1.230 43 H 0.169 0.831 44 H 0.182 0.818 45 H 0.180 0.820 46 H 0.084 0.916 47 H 0.092 0.908 48 H 0.075 0.925 49 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges -9.271 0.254 -5.569 10.818 hybrid contribution 0.195 0.831 0.655 1.076 sum -9.076 1.085 -4.914 10.378 Atomic orbital electron populations 1.43837 1.06506 1.13694 1.76264 1.21215 0.83447 0.91593 0.73818 1.90746 1.69497 1.35846 1.51988 1.21412 0.95517 0.92926 1.02705 0.86551 1.21526 1.01596 0.95624 0.95459 1.21622 0.92648 0.96691 1.03849 1.21365 0.95985 0.93757 0.99783 0.89552 1.21409 0.99794 0.92735 0.85793 1.45673 1.49973 1.18808 1.21590 1.20574 0.79710 0.81920 0.88173 1.90773 1.38499 1.68110 1.48202 1.22743 0.99821 0.84709 0.96721 1.86127 1.68048 1.30960 1.38685 1.19203 0.96318 0.90932 0.86737 1.20302 1.03289 0.93602 0.99880 1.20207 0.98077 0.96315 0.93998 1.25438 0.99380 0.89425 1.05293 1.86480 1.31015 1.66062 1.53070 0.93564 0.89293 0.75749 0.71260 1.21214 0.99005 0.98587 0.98498 1.21356 0.97125 0.92634 0.97631 1.21646 1.02634 1.03457 0.94253 1.21497 1.00153 0.95090 0.97995 1.21278 0.93017 0.97091 1.02168 0.75066 0.76540 0.89074 0.91704 0.89594 0.90808 0.92741 0.91904 0.74097 0.85333 0.85834 0.87292 0.88379 0.75432 1.20795 1.23011 0.83136 0.81771 0.82033 0.91577 0.90780 0.92517 0.92793 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 5.74 8.77 -173.53 -1.52 4.22 16 2 C 0.51 0.37 7.43 87.66 0.65 1.02 16 3 O -0.60 -7.23 16.82 -3.02 -0.05 -7.28 16 4 C -0.10 0.55 2.52 -11.54 -0.03 0.53 16 5 H 0.12 -0.99 8.14 -2.39 -0.02 -1.01 16 6 C -0.10 1.07 5.10 30.59 0.16 1.23 16 7 C -0.11 1.25 5.08 30.60 0.16 1.41 16 8 C -0.09 0.72 2.22 -10.79 -0.02 0.69 16 9 H 0.09 -0.73 8.14 -2.39 -0.02 -0.75 16 10 C 0.13 -0.45 5.07 86.38 0.44 -0.01 16 11 N -0.71 4.03 5.28 -463.05 -2.45 1.59 16 12 C 0.51 1.18 7.91 87.65 0.69 1.88 16 13 O -0.58 -8.68 16.50 16.01 0.26 -8.42 16 14 C 0.04 -0.13 5.22 71.23 0.37 0.24 16 15 O -0.32 -2.23 9.67 -73.42 -0.71 -2.94 16 16 C 0.11 0.46 6.69 22.51 0.15 0.61 16 17 C -0.15 -1.02 9.63 22.37 0.22 -0.81 16 18 C -0.09 -0.18 5.35 -19.88 -0.11 -0.29 16 19 C -0.09 -0.16 2.80 71.24 0.20 0.04 16 20 O -0.56 -1.78 12.84 -148.98 -1.91 -3.69 16 21 Si 0.80 -1.76 29.80 68.60 2.04 0.29 16 22 C -0.16 0.45 8.67 22.28 0.19 0.64 16 23 C -0.07 0.36 10.04 22.25 0.22 0.59 16 24 C -0.20 0.70 9.04 22.37 0.20 0.90 16 25 C -0.11 0.54 5.21 30.61 0.16 0.70 16 26 C -0.10 0.14 4.50 30.61 0.14 0.28 16 27 H 0.42 -5.73 8.25 -92.71 -0.76 -6.50 16 28 H 0.40 -2.75 8.93 -92.70 -0.83 -3.58 16 29 H 0.09 -1.28 7.56 -2.39 -0.02 -1.30 16 30 H 0.06 -0.53 8.14 -2.39 -0.02 -0.55 16 31 H 0.09 -1.24 7.18 -2.39 -0.02 -1.25 16 32 H 0.07 -0.80 8.14 -2.39 -0.02 -0.82 16 33 H 0.05 0.03 8.14 -2.39 -0.02 0.01 16 34 H 0.06 -0.07 8.14 -2.39 -0.02 -0.09 16 35 H 0.42 -5.71 7.65 -92.72 -0.71 -6.42 16 36 H 0.13 -1.39 7.66 -2.38 -0.02 -1.41 16 37 H 0.12 -1.22 7.66 -2.39 -0.02 -1.24 16 38 H 0.11 1.15 8.06 -2.91 -0.02 1.13 16 39 H 0.10 0.42 7.96 -2.39 -0.02 0.40 16 40 H 0.40 -2.26 8.70 -74.06 -0.64 -2.90 16 41 H -0.28 -0.49 7.11 99.48 0.71 0.22 16 42 H -0.30 -1.69 7.11 99.48 0.71 -0.99 16 43 H 0.15 -1.19 4.90 -2.91 -0.01 -1.21 16 44 H 0.16 -1.93 8.06 -2.91 -0.02 -1.95 16 45 H 0.16 -1.74 6.30 -2.91 -0.02 -1.75 16 46 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 47 H 0.07 -0.41 8.14 -2.39 -0.02 -0.43 16 48 H 0.06 0.10 8.10 -2.39 -0.02 0.08 16 49 H 0.05 0.14 8.10 -2.39 -0.02 0.12 16 Total: 0.00 -36.60 396.55 -2.44 -39.05 By element: Atomic # 1 Polarization: -30.55 SS G_CDS: -1.90 Total: -32.45 kcal Atomic # 6 Polarization: 5.84 SS G_CDS: 3.79 Total: 9.63 kcal Atomic # 7 Polarization: 9.78 SS G_CDS: -3.97 Total: 5.81 kcal Atomic # 8 Polarization: -19.92 SS G_CDS: -2.41 Total: -22.32 kcal Atomic # 14 Polarization: -1.76 SS G_CDS: 2.04 Total: 0.29 kcal Total: -36.60 -2.44 -39.05 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11352696_4860298.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.383 kcal (2) G-P(sol) polarization free energy of solvation -36.603 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.986 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.443 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.046 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.429 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds