Wall clock time and date at job start Sat Mar 6 2021 13:00:31
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
*******************************************************************************
* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= 0
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS WATER
*******************************************************************************
Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 C
2 2 N 1.46493 * 1
3 3 C 1.37647 * 125.67765 * 2 1
4 4 C 1.46671 * 126.22354 * 359.97438 * 3 2 1
5 5 O 1.21699 * 120.00257 * 6.16405 * 4 3 2
6 6 N 1.34773 * 120.00331 * 186.16974 * 4 3 2
7 7 C 1.46499 * 120.00522 * 174.78424 * 6 4 3
8 8 C 1.53002 * 109.47060 * 180.02562 * 7 6 4
9 9 H 1.08997 * 109.47380 * 55.00019 * 8 7 6
10 10 C 1.53001 * 109.46685 * 174.99786 * 8 7 6
11 11 C 1.52997 * 109.46955 * 179.97438 * 10 8 7
12 12 C 1.53001 * 109.47411 * 299.99994 * 11 10 8
13 13 H 1.08997 * 109.47386 * 300.00070 * 12 11 10
14 14 C 1.50700 * 109.47439 * 179.97438 * 12 11 10
15 15 N 1.34772 * 120.00158 * 180.02562 * 14 12 11
16 16 O 1.21278 * 120.00009 * 359.97438 * 14 12 11
17 17 C 1.53002 * 109.46726 * 59.99894 * 12 11 10
18 18 C 1.52999 * 109.46678 * 294.99485 * 8 7 6
19 19 C 1.37877 * 107.54847 * 180.25546 * 3 2 1
20 20 C 1.39878 * 107.09395 * 359.74128 * 19 3 2
21 21 Br 1.89103 * 126.07223 * 179.97438 * 20 19 3
22 22 C 1.35499 * 107.85234 * 359.97438 * 20 19 3
23 23 C 1.50700 * 125.57066 * 179.97438 * 22 20 19
24 24 O 1.42900 * 109.47075 * 122.21689 * 23 22 20
25 25 Si 1.86303 * 109.47256 * 242.21800 * 23 22 20
26 26 H 1.09006 * 109.47213 * 275.76834 * 1 2 3
27 27 H 1.09003 * 109.47511 * 35.76625 * 1 2 3
28 28 H 1.09003 * 109.47465 * 155.77087 * 1 2 3
29 29 H 0.97000 * 119.99560 * 354.77714 * 6 4 3
30 30 H 1.09003 * 109.46335 * 299.99686 * 7 6 4
31 31 H 1.08995 * 109.47072 * 59.99718 * 7 6 4
32 32 H 1.08997 * 109.47231 * 299.99481 * 10 8 7
33 33 H 1.09004 * 109.47392 * 59.99908 * 10 8 7
34 34 H 1.09003 * 109.47288 * 59.99764 * 11 10 8
35 35 H 1.09002 * 109.47495 * 179.97438 * 11 10 8
36 36 H 0.97000 * 120.00024 * 359.97438 * 15 14 12
37 37 H 0.96999 * 119.99876 * 179.97438 * 15 14 12
38 38 H 1.09003 * 109.47338 * 60.00619 * 17 12 11
39 39 H 1.09005 * 109.46658 * 180.02562 * 17 12 11
40 40 H 1.09004 * 109.47380 * 300.00080 * 18 8 7
41 41 H 1.08996 * 109.47436 * 60.00764 * 18 8 7
42 42 H 1.08001 * 126.45095 * 179.74129 * 19 3 2
43 43 H 1.09008 * 109.47149 * 2.22058 * 23 22 20
44 44 H 0.96698 * 113.99951 * 60.00209 * 24 23 22
45 45 H 1.48496 * 110.00056 * 55.00422 * 25 23 22
46 46 H 1.48508 * 109.99764 * 176.32352 * 25 23 22
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 6 0.0000 0.0000 0.0000
2 7 1.4649 0.0000 0.0000
3 6 2.2677 1.1181 0.0000
4 6 1.8121 2.5123 -0.0005
5 8 0.6270 2.7652 0.1121
6 7 2.7057 3.5133 -0.1259
7 6 2.2428 4.8984 -0.2414
8 6 3.4494 5.8302 -0.3715
9 1 4.0689 5.5078 -1.2084
10 6 2.9649 7.2606 -0.6170
11 6 4.1714 8.1925 -0.7465
12 6 4.9923 8.1464 0.5438
13 1 4.3725 8.4687 1.3805
14 6 6.1810 9.0639 0.4161
15 7 7.0515 9.1852 1.4377
16 8 6.3548 9.6923 -0.6065
17 6 5.4767 6.7160 0.7892
18 6 4.2707 5.7842 0.9186
19 6 3.5780 0.6891 -0.0059
20 6 3.5528 -0.7094 -0.0034
21 35 5.0609 -1.8503 -0.0097
22 6 2.2558 -1.1015 0.0044
23 6 1.7713 -2.5285 0.0089
24 8 0.9444 -2.7471 1.1537
25 14 0.7877 -2.8553 -1.5392
26 1 -0.3634 0.1033 1.0225
27 1 -0.3634 0.8339 -0.6006
28 1 -0.3634 -0.9371 -0.4217
29 1 3.6555 3.3166 -0.1396
30 1 1.6106 4.9977 -1.1238
31 1 1.6710 5.1657 0.6472
32 1 2.3798 7.2933 -1.5360
33 1 2.3454 7.5830 0.2199
34 1 4.7913 7.8702 -1.5831
35 1 3.8263 9.2115 -0.9218
36 1 6.9127 8.6823 2.2555
37 1 7.8168 9.7755 1.3553
38 1 6.0966 6.3937 -0.0474
39 1 6.0612 6.6831 1.7088
40 1 3.6511 6.1066 1.7554
41 1 4.6158 4.7652 1.0934
42 1 4.4581 1.3151 -0.0113
43 1 2.6271 -3.2026 0.0448
44 1 0.1619 -2.1801 1.1877
45 1 1.5977 -2.5160 -2.7367
46 1 0.3794 -4.2822 -1.5897
There are 63 doubly filled levels
RHF calculation, no. of doubly occupied orbitals= 63
No. of singly occupied orbitals= 1
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988).
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=WATER
s_22_11352696_5000100.mol2 46
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Sat Mar 6 2021 13:00:31
Heat of formation + Delta-G solvation = -74.999768 kcal
Electronic energy + Delta-G solvation = -29417.824252 eV
Core-core repulsion = 25161.952332 eV
Total energy + Delta-G solvation = -4255.871919 eV
No. of doubly occupied orbitals = 63
and no. of open levels = 1
Molecular weight
(most abundant/longest-lived isotopes) = 400.083 amu
Computer time = 1.18 seconds
Orbital eigenvalues (eV)
-42.88407 -41.18509 -40.37612 -38.85876 -37.90674 -35.98273 -34.74149 -34.42325
-32.84571 -31.82991 -31.60832 -30.94084 -28.01163 -27.34125 -26.25366 -23.75704
-23.64350 -22.85016 -21.57260 -21.36999 -20.72274 -20.42079 -18.97994 -18.42237
-18.11348 -17.60616 -17.24087 -17.08092 -16.72200 -16.41867 -16.13605 -15.74684
-15.55107 -15.36903 -15.05722 -14.85993 -14.65044 -14.59259 -14.42379 -14.30108
-14.22022 -13.79374 -13.69987 -13.40476 -13.20721 -13.14512 -12.93406 -12.85876
-12.36615 -12.16738 -12.03438 -11.93644 -11.73567 -11.41473 -11.31997 -11.11600
-11.00874 -10.86587 -10.79886 -10.63951 -10.17773 -9.80030 -9.26861 -5.24041
0.15547 0.61194 0.90143 1.19598 1.45289 1.55254 1.64443 1.82516
2.18927 2.30811 2.63520 3.17594 3.39716 3.55708 3.61555 3.66633
3.75138 3.77636 3.89229 4.03042 4.12924 4.24843 4.27337 4.32836
4.41569 4.43218 4.49677 4.51103 4.58792 4.63421 4.70295 4.72848
4.81606 4.89126 5.04893 5.14237 5.18367 5.22940 5.25442 5.29623
5.35491 5.40955 5.55546 5.57361 5.83541 5.89261 6.42445 6.42816
6.47371 7.07787 7.35690
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 C 0.052 3.948
2 N -0.395 5.395
3 C -0.043 4.043
4 C 0.591 3.409
5 O -0.570 6.570
6 N -0.703 5.703
7 C 0.130 3.870
8 C -0.093 4.093
9 H 0.082 0.918
10 C -0.106 4.106
11 C -0.098 4.098
12 C -0.103 4.103
13 H 0.118 0.882
14 C 0.513 3.487
15 N -0.841 5.841
16 O -0.599 6.599
17 C -0.105 4.105
18 C -0.111 4.111
19 C -0.107 4.107
20 C -0.184 4.184
21 Br -0.029 7.029
22 C 0.048 3.952
23 C -0.055 4.055
24 O -0.541 6.541
25 Si 0.758 3.242
26 H 0.106 0.894
27 H 0.106 0.894
28 H 0.112 0.888
29 H 0.414 0.586
30 H 0.064 0.936
31 H 0.070 0.930
32 H 0.069 0.931
33 H 0.077 0.923
34 H 0.054 0.946
35 H 0.055 0.945
36 H 0.417 0.583
37 H 0.403 0.597
38 H 0.061 0.939
39 H 0.088 0.912
40 H 0.076 0.924
41 H 0.078 0.922
42 H 0.177 0.823
43 H 0.127 0.873
44 H 0.389 0.611
45 H -0.284 1.284
46 H -0.268 1.268
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges -1.638 0.459 3.731 4.101
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 C -0.087 4.087
2 N -0.068 5.068
3 C -0.157 4.157
4 C 0.378 3.622
5 O -0.451 6.451
6 N -0.355 5.355
7 C 0.007 3.993
8 C -0.111 4.111
9 H 0.100 0.900
10 C -0.144 4.144
11 C -0.136 4.136
12 C -0.124 4.124
13 H 0.136 0.864
14 C 0.299 3.701
15 N -0.404 5.404
16 O -0.480 6.480
17 C -0.143 4.143
18 C -0.149 4.149
19 C -0.134 4.134
20 C -0.270 4.270
21 Br 0.055 6.945
22 C -0.074 4.074
23 C -0.164 4.164
24 O -0.348 6.348
25 Si 0.660 3.340
26 H 0.124 0.876
27 H 0.125 0.875
28 H 0.129 0.871
29 H 0.252 0.748
30 H 0.082 0.918
31 H 0.088 0.912
32 H 0.088 0.912
33 H 0.095 0.905
34 H 0.073 0.927
35 H 0.074 0.926
36 H 0.249 0.751
37 H 0.234 0.766
38 H 0.080 0.920
39 H 0.107 0.893
40 H 0.095 0.905
41 H 0.097 0.903
42 H 0.194 0.806
43 H 0.144 0.856
44 H 0.239 0.761
45 H -0.210 1.210
46 H -0.194 1.194
Dipole moment (debyes) X Y Z Total
from point charges -1.979 -0.286 2.499 3.201
hybrid contribution 1.312 0.320 0.437 1.420
sum -0.667 0.034 2.937 3.012
Atomic orbital electron populations
1.22726 0.73717 1.05794 1.06443 1.43876 1.07922 1.03517 1.51471
1.20084 0.89968 0.87866 1.17796 1.16874 0.85482 0.83520 0.76291
1.90822 1.17425 1.85075 1.51821 1.45575 1.10251 1.06218 1.73470
1.21452 0.96884 0.78743 1.02211 1.21376 0.95600 0.94568 0.99601
0.89951 1.21471 0.96965 0.93000 1.03009 1.21280 0.96452 0.99747
0.96163 1.21405 0.94046 0.95635 1.01355 0.86391 1.21239 0.84743
0.81643 0.82491 1.43848 1.28801 1.49147 1.18582 1.90743 1.76657
1.49086 1.31531 1.21518 0.98341 0.91396 1.03053 1.21606 0.96077
1.00112 0.97085 1.21482 0.95899 0.92679 1.03312 1.20968 0.91340
0.95054 1.19595 1.96657 1.36203 1.63381 1.98256 1.20817 0.89897
0.90270 1.06379 1.25017 1.00006 0.90405 1.01002 1.86595 1.39725
1.64632 1.43872 0.94415 0.84937 0.82402 0.72285 0.87603 0.87541
0.87067 0.74818 0.91792 0.91212 0.91194 0.90456 0.92720 0.92629
0.75116 0.76579 0.91974 0.89343 0.90535 0.90294 0.80596 0.85597
0.76086 1.20986 1.19377
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 15.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 C 0.05 -0.35 8.64 127.77 1.10 0.76 16
2 N -0.39 0.22 3.11 -519.62 -1.62 -1.40 16
3 C -0.04 -0.03 6.88 40.35 0.28 0.25 16
4 C 0.59 0.66 7.77 86.45 0.67 1.33 16
5 O -0.57 -3.81 14.90 -4.34 -0.06 -3.88 16
6 N -0.70 3.32 5.27 -467.09 -2.46 0.85 16
7 C 0.13 -0.68 5.07 86.38 0.44 -0.24 16
8 C -0.09 0.75 2.23 -10.79 -0.02 0.72 16
9 H 0.08 -0.63 8.14 -2.39 -0.02 -0.65 16
10 C -0.11 0.63 5.20 30.59 0.16 0.79 16
11 C -0.10 0.16 4.49 30.59 0.14 0.30 16
12 C -0.10 0.51 2.53 -11.54 -0.03 0.48 16
13 H 0.12 -1.01 8.14 -2.39 -0.02 -1.02 16
14 C 0.51 0.65 7.42 87.66 0.65 1.30 16
15 N -0.84 5.07 8.77 -173.54 -1.52 3.54 16
16 O -0.60 -7.45 16.82 -3.02 -0.05 -7.50 16
17 C -0.11 0.94 5.10 30.58 0.16 1.10 16
18 C -0.11 1.14 5.07 30.58 0.16 1.29 16
19 C -0.11 0.03 10.34 22.58 0.23 0.27 16
20 C -0.18 -0.55 6.53 22.03 0.14 -0.41 16
21 Br -0.03 -0.10 33.05 -20.37 -0.67 -0.78 16
22 C 0.05 0.07 5.18 41.34 0.21 0.29 16
23 C -0.05 -0.01 2.88 71.24 0.20 0.20 16
24 O -0.54 0.32 12.88 -148.98 -1.92 -1.60 16
25 Si 0.76 -1.63 29.93 68.60 2.05 0.42 16
26 H 0.11 -0.93 8.14 -2.38 -0.02 -0.95 16
27 H 0.11 -0.48 6.81 -2.39 -0.02 -0.50 16
28 H 0.11 -1.41 4.12 -2.39 -0.01 -1.42 16
29 H 0.41 -3.82 6.56 -92.71 -0.61 -4.43 16
30 H 0.06 -0.18 8.14 -2.39 -0.02 -0.20 16
31 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16
32 H 0.07 -0.36 8.14 -2.39 -0.02 -0.38 16
33 H 0.08 -0.55 8.14 -2.39 -0.02 -0.57 16
34 H 0.05 0.10 8.10 -2.39 -0.02 0.08 16
35 H 0.05 0.11 8.10 -2.39 -0.02 0.09 16
36 H 0.42 -5.31 8.25 -92.71 -0.76 -6.08 16
37 H 0.40 -2.42 8.93 -92.71 -0.83 -3.25 16
38 H 0.06 -0.40 8.14 -2.39 -0.02 -0.42 16
39 H 0.09 -1.09 7.56 -2.38 -0.02 -1.11 16
40 H 0.08 -0.80 8.14 -2.39 -0.02 -0.82 16
41 H 0.08 -0.92 7.18 -2.39 -0.02 -0.94 16
42 H 0.18 -1.06 7.45 -2.91 -0.02 -1.09 16
43 H 0.13 0.28 6.94 -2.38 -0.02 0.26 16
44 H 0.39 -3.41 6.73 -74.06 -0.50 -3.90 16
45 H -0.28 -1.27 7.11 99.48 0.71 -0.57 16
46 H -0.27 -0.79 7.11 99.48 0.71 -0.08 16
Total: 0.00 -26.75 384.29 -3.36 -30.11
By element:
Atomic # 1 Polarization: -26.62 SS G_CDS: -1.60 Total: -28.21 kcal
Atomic # 6 Polarization: 3.94 SS G_CDS: 4.49 Total: 8.44 kcal
Atomic # 7 Polarization: 8.60 SS G_CDS: -5.60 Total: 3.00 kcal
Atomic # 8 Polarization: -10.94 SS G_CDS: -2.03 Total: -12.97 kcal
Atomic # 14 Polarization: -1.63 SS G_CDS: 2.05 Total: 0.42 kcal
Atomic # 35 Polarization: -0.10 SS G_CDS: -0.67 Total: -0.78 kcal
Total: -26.75 -3.36 -30.11 kcal
The number of atoms in the molecule is 46
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
s_22_11352696_5000100.mol2 46
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute -44.892 kcal
(2) G-P(sol) polarization free energy of solvation -26.747 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.639 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.360 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.108 kcal
(6) G-S(sol) free energy of system = (1) + (5) -75.000 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 1.18 seconds