Wall clock time and date at job start Sat Mar 6 2021 14:58:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.35531 * 125.68075 * 2 1 4 4 C 1.35454 * 108.87345 * 180.02562 * 3 2 1 5 5 C 1.50695 * 126.06562 * 180.02562 * 4 3 2 6 6 O 1.42904 * 109.46988 * 119.98071 * 5 4 3 7 7 Si 1.86302 * 109.47460 * 359.97438 * 5 4 3 8 8 C 1.39838 * 107.86352 * 359.74511 * 4 3 2 9 9 C 1.37656 * 125.67888 * 180.02562 * 2 1 3 10 10 C 1.46685 * 126.23252 * 359.97438 * 9 2 1 11 11 O 1.21697 * 119.99898 * 5.17479 * 10 9 2 12 12 N 1.34766 * 119.99989 * 185.17157 * 10 9 2 13 13 C 1.46505 * 120.00162 * 174.41238 * 12 10 9 14 14 H 1.09000 * 109.46921 * 35.00123 * 13 12 10 15 15 C 1.52994 * 109.47235 * 155.00178 * 13 12 10 16 16 C 1.52998 * 109.47169 * 179.97438 * 15 13 12 17 17 C 1.52997 * 109.47198 * 299.99903 * 16 15 13 18 18 H 1.09000 * 109.47218 * 299.99900 * 17 16 15 19 19 O 1.42902 * 109.47255 * 179.97438 * 17 16 15 20 20 C 1.53007 * 109.46951 * 60.00209 * 17 16 15 21 21 C 1.52998 * 109.46809 * 299.99572 * 20 17 16 22 22 H 1.08994 * 109.47602 * 270.73389 * 1 2 3 23 23 H 1.09002 * 109.46801 * 30.74105 * 1 2 3 24 24 H 1.09007 * 109.47035 * 150.73501 * 1 2 3 25 25 H 1.08001 * 125.56042 * 359.97438 * 3 2 1 26 26 H 1.09007 * 109.47589 * 239.97997 * 5 4 3 27 27 H 0.96701 * 113.99541 * 299.99901 * 6 5 4 28 28 H 1.48504 * 110.00148 * 179.97438 * 7 5 4 29 29 H 1.48504 * 109.99713 * 301.31694 * 7 5 4 30 30 H 1.07996 * 126.45246 * 180.30697 * 8 4 3 31 31 H 0.97008 * 120.00195 * 354.41339 * 12 10 9 32 32 H 1.09000 * 109.47651 * 59.99817 * 15 13 12 33 33 H 1.08999 * 109.47318 * 300.00137 * 15 13 12 34 34 H 1.08997 * 109.47536 * 179.97438 * 16 15 13 35 35 H 1.09000 * 109.46954 * 59.99965 * 16 15 13 36 36 H 0.96701 * 114.00172 * 179.97438 * 19 17 16 37 37 H 1.09000 * 109.47412 * 59.99809 * 20 17 16 38 38 H 1.09004 * 109.46920 * 180.02562 * 20 17 16 39 39 H 1.09000 * 109.47357 * 300.00846 * 21 20 17 40 40 H 1.09002 * 109.47287 * 179.97438 * 21 20 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1009 0.0000 4 6 3.5521 0.7092 -0.0006 5 6 4.7536 1.6188 -0.0002 6 8 5.5400 1.3687 1.1665 7 14 4.1887 3.3941 0.0003 8 6 3.5779 -0.6889 0.0050 9 6 2.2678 -1.1182 -0.0005 10 6 1.8124 -2.5125 -0.0006 11 8 0.6257 -2.7650 -0.0953 12 7 2.7081 -3.5140 0.1041 13 6 2.2472 -4.8992 0.2273 14 1 1.3414 -5.0346 -0.3636 15 6 3.3353 -5.8460 -0.2829 16 6 2.8542 -7.2926 -0.1536 17 6 2.5567 -7.6018 1.3150 18 1 3.4627 -7.4661 1.9056 19 8 2.1068 -8.9528 1.4356 20 6 1.4685 -6.6550 1.8252 21 6 1.9497 -5.2084 1.6960 22 1 -0.3634 0.0132 1.0275 23 1 -0.3633 0.8833 -0.5253 24 1 -0.3633 -0.8966 -0.5024 25 1 1.9082 2.1235 -0.0004 26 1 5.3535 1.4288 -0.8903 27 1 5.0689 1.5179 1.9977 28 1 5.3644 4.3013 0.0013 29 1 3.3435 3.6585 -1.1918 30 1 4.4583 -1.3144 0.0107 31 1 3.6581 -3.3177 0.0979 32 1 4.2412 -5.7106 0.3080 33 1 3.5476 -5.6254 -1.3290 34 1 3.6292 -7.9672 -0.5175 35 1 1.9482 -7.4284 -0.7443 36 1 1.8994 -9.2189 2.3419 37 1 0.5625 -6.7907 1.2345 38 1 1.2568 -6.8750 2.8716 39 1 2.8557 -5.0727 2.2865 40 1 1.1743 -4.5337 2.0590 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_10803934.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:58:40 Heat of formation + Delta-G solvation = -75.242865 kcal Electronic energy + Delta-G solvation = -22387.961928 eV Core-core repulsion = 18976.624759 eV Total energy + Delta-G solvation = -3411.337169 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.146 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -42.56200 -40.82099 -39.36877 -37.71255 -36.95919 -34.74573 -33.74209 -31.95910 -31.23743 -29.16699 -28.26255 -25.74460 -24.30143 -23.94082 -22.59186 -21.35264 -21.05156 -20.33419 -18.87314 -18.24429 -17.69265 -17.33181 -16.82375 -16.71652 -16.15192 -15.79577 -15.63528 -15.56734 -15.25284 -15.00951 -14.67192 -14.40461 -14.23658 -14.07940 -13.54634 -13.40724 -13.34040 -13.28191 -13.20887 -13.01752 -12.48517 -12.25089 -12.22100 -11.92011 -11.81547 -11.35649 -11.01100 -10.81600 -10.35611 -10.14252 -9.69301 -9.26203 -5.03584 0.43727 1.33947 1.49713 1.55457 1.67575 2.00341 2.27226 2.36897 3.15350 3.50491 3.56655 3.63034 3.70107 3.77695 3.90068 3.94625 4.06247 4.12292 4.16831 4.21564 4.26076 4.32762 4.35655 4.37005 4.56727 4.64653 4.65415 4.75965 4.77242 4.89339 4.95228 5.01326 5.04843 5.14645 5.18572 5.26930 5.42494 5.65818 5.88883 6.10651 6.44717 6.66613 6.67917 7.16438 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.404 5.404 3 C 0.026 3.974 4 C -0.208 4.208 5 C -0.030 4.030 6 O -0.543 6.543 7 Si 0.684 3.316 8 C -0.113 4.113 9 C -0.054 4.054 10 C 0.593 3.407 11 O -0.547 6.547 12 N -0.716 5.716 13 C 0.145 3.855 14 H 0.094 0.906 15 C -0.124 4.124 16 C -0.110 4.110 17 C 0.103 3.897 18 H 0.057 0.943 19 O -0.568 6.568 20 C -0.149 4.149 21 C -0.127 4.127 22 H 0.079 0.921 23 H 0.085 0.915 24 H 0.107 0.893 25 H 0.173 0.827 26 H 0.110 0.890 27 H 0.377 0.623 28 H -0.256 1.256 29 H -0.258 1.258 30 H 0.145 0.855 31 H 0.404 0.596 32 H 0.073 0.927 33 H 0.078 0.922 34 H 0.077 0.923 35 H 0.074 0.926 36 H 0.380 0.620 37 H 0.074 0.926 38 H 0.069 0.931 39 H 0.068 0.932 40 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.049 1.459 2.995 3.332 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 N -0.075 5.075 3 C -0.111 4.111 4 C -0.214 4.214 5 C -0.142 4.142 6 O -0.348 6.348 7 Si 0.586 3.414 8 C -0.139 4.139 9 C -0.168 4.168 10 C 0.381 3.619 11 O -0.426 6.426 12 N -0.367 5.367 13 C 0.041 3.959 14 H 0.112 0.888 15 C -0.162 4.162 16 C -0.148 4.148 17 C 0.044 3.956 18 H 0.075 0.925 19 O -0.374 6.374 20 C -0.188 4.188 21 C -0.165 4.165 22 H 0.098 0.902 23 H 0.104 0.896 24 H 0.125 0.875 25 H 0.190 0.810 26 H 0.128 0.872 27 H 0.224 0.776 28 H -0.180 1.180 29 H -0.182 1.182 30 H 0.163 0.837 31 H 0.239 0.761 32 H 0.091 0.909 33 H 0.097 0.903 34 H 0.096 0.904 35 H 0.093 0.907 36 H 0.227 0.773 37 H 0.093 0.907 38 H 0.088 0.912 39 H 0.086 0.914 40 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -0.775 1.885 1.411 2.479 hybrid contribution 0.462 -0.271 0.326 0.628 sum -0.312 1.614 1.738 2.392 Atomic orbital electron populations 1.22395 0.75537 1.05792 1.04288 1.43813 1.07011 1.04697 1.52029 1.21869 0.90079 0.91678 1.07435 1.19784 0.93690 0.94872 1.13089 1.24313 0.91948 1.07210 0.90759 1.86479 1.40690 1.92186 1.15475 0.95055 0.82918 0.75577 0.87865 1.21176 0.94262 0.94627 1.03816 1.20028 0.90302 0.87603 1.18828 1.16966 0.85584 0.83526 0.75816 1.90793 1.16322 1.84771 1.50680 1.45693 1.09861 1.06159 1.74961 1.21066 0.98671 0.79331 0.96800 0.88843 1.21769 0.98100 0.93908 1.02449 1.21400 1.02765 0.95329 0.95276 1.21854 0.95396 0.81444 0.96925 0.92539 1.86520 1.88843 1.28444 1.33565 1.22237 0.99831 0.94690 1.02011 1.21871 1.02057 0.96410 0.96202 0.90217 0.89613 0.87473 0.81019 0.87220 0.77554 1.18024 1.18247 0.83715 0.76132 0.90862 0.90291 0.90431 0.90712 0.77294 0.90699 0.91213 0.91368 0.91061 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.05 10.66 59.84 0.64 0.59 16 2 N -0.40 -0.36 3.16 -120.24 -0.38 -0.74 16 3 C 0.03 -0.01 9.94 -16.91 -0.17 -0.18 16 4 C -0.21 -0.04 5.44 -105.02 -0.57 -0.61 16 5 C -0.03 0.01 3.02 36.00 0.11 0.12 16 6 O -0.54 -0.07 12.88 -35.23 -0.45 -0.53 16 7 Si 0.68 -0.98 30.59 -169.99 -5.20 -6.18 16 8 C -0.11 -0.07 10.29 -39.12 -0.40 -0.48 16 9 C -0.05 -0.09 6.89 -81.98 -0.56 -0.66 16 10 C 0.59 1.42 7.74 -12.85 -0.10 1.32 16 11 O -0.55 -2.84 14.26 5.19 0.07 -2.76 16 12 N -0.72 0.23 5.06 -55.11 -0.28 -0.05 16 13 C 0.15 -0.06 2.50 -67.93 -0.17 -0.23 16 14 H 0.09 0.15 7.50 -51.93 -0.39 -0.24 16 15 C -0.12 0.24 5.39 -26.74 -0.14 0.09 16 16 C -0.11 0.07 5.57 -26.73 -0.15 -0.07 16 17 C 0.10 -0.07 3.47 -26.73 -0.09 -0.16 16 18 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 19 O -0.57 -0.40 13.32 -35.23 -0.47 -0.87 16 20 C -0.15 0.13 5.54 -26.73 -0.15 -0.02 16 21 C -0.13 0.07 5.49 -26.73 -0.15 -0.07 16 22 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 23 H 0.09 -0.26 8.14 -51.93 -0.42 -0.68 16 24 H 0.11 0.12 6.18 -51.92 -0.32 -0.20 16 25 H 0.17 -0.54 6.19 -52.49 -0.32 -0.86 16 26 H 0.11 0.03 7.96 -51.93 -0.41 -0.38 16 27 H 0.38 -1.34 8.70 45.56 0.40 -0.95 16 28 H -0.26 -0.52 7.11 56.52 0.40 -0.12 16 29 H -0.26 -0.21 7.11 56.52 0.40 0.20 16 30 H 0.15 -0.14 7.45 -52.49 -0.39 -0.53 16 31 H 0.40 -0.98 7.50 -40.82 -0.31 -1.29 16 32 H 0.07 -0.21 8.14 -51.93 -0.42 -0.64 16 33 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 34 H 0.08 -0.04 8.14 -51.93 -0.42 -0.47 16 35 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 36 H 0.38 -1.18 9.08 45.56 0.41 -0.77 16 37 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 38 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 39 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 40 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 LS Contribution 325.55 15.07 4.91 4.91 Total: 0.00 -8.44 325.55 -8.89 -17.34 By element: Atomic # 1 Polarization: -5.57 SS G_CDS: -5.18 Total: -10.75 kcal Atomic # 6 Polarization: 1.56 SS G_CDS: -1.91 Total: -0.35 kcal Atomic # 7 Polarization: -0.14 SS G_CDS: -0.66 Total: -0.80 kcal Atomic # 8 Polarization: -3.31 SS G_CDS: -0.85 Total: -4.16 kcal Atomic # 14 Polarization: -0.98 SS G_CDS: -5.20 Total: -6.18 kcal Total LS contribution 4.91 Total: 4.91 kcal Total: -8.44 -8.89 -17.34 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_10803934.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.907 kcal (2) G-P(sol) polarization free energy of solvation -8.441 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -66.348 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.894 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.336 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.243 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds