Wall clock time and date at job start Sat Mar 6 2021 14:58:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86307 * 109.47028 * 2 1 4 4 C 1.50698 * 109.46966 * 119.99522 * 2 1 3 5 5 C 1.36454 * 120.29605 * 119.98515 * 4 2 1 6 6 C 1.40089 * 119.25452 * 180.02562 * 5 4 2 7 7 C 1.40854 * 132.86532 * 179.97438 * 6 5 4 8 8 C 1.46571 * 126.57604 * 0.02562 * 7 6 5 9 9 O 1.21720 * 120.00276 * 359.97438 * 8 7 6 10 10 N 1.34779 * 119.99760 * 179.97438 * 8 7 6 11 11 C 1.46499 * 119.99814 * 179.97438 * 10 8 7 12 12 H 1.08994 * 109.47110 * 35.00326 * 11 10 8 13 13 C 1.53006 * 109.46952 * 155.00068 * 11 10 8 14 14 C 1.52993 * 109.46944 * 179.97438 * 13 11 10 15 15 C 1.52998 * 109.47521 * 300.00136 * 14 13 11 16 16 H 1.08994 * 109.47039 * 300.00170 * 15 14 13 17 17 O 1.42902 * 109.47439 * 180.02562 * 15 14 13 18 18 C 1.53006 * 109.47122 * 59.99973 * 15 14 13 19 19 C 1.52995 * 109.47170 * 275.00084 * 11 10 8 20 20 C 1.40554 * 106.84206 * 180.02562 * 7 6 5 21 21 N 1.30742 * 108.74345 * 0.24591 * 20 7 6 22 22 N 1.36583 * 120.23462 * 0.02562 * 6 5 4 23 23 C 1.36248 * 120.07620 * 359.97438 * 22 6 5 24 24 C 1.35193 * 120.70487 * 0.02562 * 23 22 6 25 25 H 0.96703 * 114.00378 * 300.00228 * 1 2 3 26 26 H 1.08991 * 109.47844 * 239.99882 * 2 1 3 27 27 H 1.48500 * 109.99847 * 178.67860 * 3 2 1 28 28 H 1.48504 * 109.99815 * 299.99307 * 3 2 1 29 29 H 1.07994 * 120.36778 * 0.06311 * 5 4 2 30 30 H 0.97005 * 120.00034 * 0.02562 * 10 8 7 31 31 H 1.08999 * 109.47204 * 300.00017 * 13 11 10 32 32 H 1.08999 * 109.46683 * 60.00517 * 13 11 10 33 33 H 1.08999 * 109.47534 * 60.00178 * 14 13 11 34 34 H 1.09003 * 109.47105 * 180.02562 * 14 13 11 35 35 H 0.96696 * 114.00181 * 179.97438 * 17 15 14 36 36 H 1.08994 * 109.47003 * 60.00175 * 18 15 14 37 37 H 1.08999 * 109.47204 * 180.02562 * 18 15 14 38 38 H 1.08999 * 109.47727 * 300.00255 * 19 11 10 39 39 H 1.09006 * 109.47515 * 60.00474 * 19 11 10 40 40 H 1.08002 * 125.62408 * 179.97438 * 20 7 6 41 41 H 1.07992 * 119.64618 * 179.97438 * 23 22 6 42 42 H 1.08000 * 119.83253 * 180.02562 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.7159 -1.8205 1.1124 6 6 3.1703 -2.4640 2.2708 7 6 3.9735 -3.6015 2.4826 8 6 4.5741 -4.4511 1.4502 9 8 4.3951 -4.1975 0.2733 10 7 5.3247 -5.5131 1.8042 11 6 5.9245 -6.3626 0.7724 12 1 6.2124 -5.7491 -0.0812 13 6 7.1628 -7.0585 1.3411 14 6 7.7889 -7.9461 0.2637 15 6 6.7728 -8.9988 -0.1839 16 1 6.4849 -9.6120 0.6700 17 8 7.3578 -9.8282 -1.1898 18 6 5.5345 -8.3029 -0.7526 19 6 4.9086 -7.4152 0.3243 20 6 4.0886 -3.7655 3.8738 21 7 3.4116 -2.8167 4.4661 22 7 2.8296 -1.9834 3.5031 23 6 2.0457 -0.8743 3.6107 24 6 1.5958 -0.2372 2.5065 25 1 -0.3934 0.4417 0.7650 26 1 1.7924 -0.5138 -0.8899 27 1 3.5346 1.7703 0.0322 28 1 1.5615 2.4679 -1.2086 29 1 2.9840 -2.1983 0.1369 30 1 5.4670 -5.7154 2.7422 31 1 7.8866 -6.3086 1.6603 32 1 6.8748 -7.6721 2.1946 33 1 8.0768 -7.3330 -0.5903 34 1 8.6708 -8.4422 0.6689 35 1 6.7688 -10.5201 -1.5206 36 1 5.8223 -7.6897 -1.6065 37 1 4.8104 -9.0528 -1.0710 38 1 4.6206 -8.0289 1.1779 39 1 4.0264 -6.9195 -0.0809 40 1 4.6411 -4.5489 4.3713 41 1 1.7803 -0.5006 4.5885 42 1 0.9756 0.6411 2.6081 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_11618758.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:58:47 Heat of formation + Delta-G solvation = -19.650938 kcal Electronic energy + Delta-G solvation = -26371.654039 eV Core-core repulsion = 22512.623185 eV Total energy + Delta-G solvation = -3859.030854 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.141 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -43.31550 -40.87593 -39.57980 -39.17178 -37.28673 -36.88550 -34.42542 -34.13911 -32.12035 -31.90061 -30.71976 -29.09101 -27.20872 -25.10582 -24.07440 -23.87001 -23.18002 -22.57844 -21.33619 -20.82448 -19.07189 -18.59626 -18.20864 -17.98432 -17.64653 -17.01574 -16.98222 -16.58624 -16.19743 -15.88520 -15.57992 -15.49856 -15.45830 -14.91715 -14.66927 -14.59809 -14.25593 -14.14849 -14.02772 -13.57504 -13.34297 -13.25630 -13.20843 -12.97970 -12.48868 -12.38344 -12.19610 -12.18163 -11.97222 -11.75169 -11.53312 -11.30274 -10.84047 -10.83105 -10.70282 -10.34971 -9.99659 -8.79007 -5.20005 -0.58315 -0.17201 0.97981 1.05391 1.11008 1.56070 1.86027 2.04268 2.22457 2.59490 3.02827 3.14556 3.21067 3.31704 3.42524 3.58659 3.62616 3.69612 3.82522 3.94627 4.01005 4.08708 4.12750 4.17317 4.21353 4.26776 4.31226 4.39406 4.45261 4.48074 4.63485 4.70316 4.82167 4.96158 5.01495 5.04839 5.07451 5.10472 5.12934 5.21413 5.26577 5.34146 5.57743 5.61912 6.28875 6.35971 6.61583 6.69694 7.39880 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.069 4.069 3 Si 0.699 3.301 4 C -0.068 4.068 5 C -0.096 4.096 6 C 0.169 3.831 7 C -0.317 4.317 8 C 0.602 3.398 9 O -0.549 6.549 10 N -0.726 5.726 11 C 0.147 3.853 12 H 0.091 0.909 13 C -0.124 4.124 14 C -0.110 4.110 15 C 0.103 3.897 16 H 0.056 0.944 17 O -0.568 6.568 18 C -0.150 4.150 19 C -0.127 4.127 20 C 0.120 3.880 21 N -0.313 5.313 22 N -0.267 5.267 23 C 0.122 3.878 24 C -0.157 4.157 25 H 0.378 0.622 26 H 0.123 0.877 27 H -0.254 1.254 28 H -0.246 1.246 29 H 0.161 0.839 30 H 0.398 0.602 31 H 0.078 0.922 32 H 0.071 0.929 33 H 0.074 0.926 34 H 0.076 0.924 35 H 0.379 0.621 36 H 0.074 0.926 37 H 0.068 0.932 38 H 0.065 0.935 39 H 0.072 0.928 40 H 0.199 0.801 41 H 0.179 0.821 42 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.884 1.897 4.724 5.428 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.178 4.178 3 Si 0.598 3.402 4 C -0.074 4.074 5 C -0.116 4.116 6 C 0.048 3.952 7 C -0.332 4.332 8 C 0.391 3.609 9 O -0.428 6.428 10 N -0.377 5.377 11 C 0.042 3.958 12 H 0.109 0.891 13 C -0.162 4.162 14 C -0.148 4.148 15 C 0.044 3.956 16 H 0.074 0.926 17 O -0.374 6.374 18 C -0.188 4.188 19 C -0.166 4.166 20 C -0.061 4.061 21 N -0.133 5.133 22 N -0.031 5.031 23 C -0.004 4.004 24 C -0.178 4.178 25 H 0.226 0.774 26 H 0.140 0.860 27 H -0.179 1.179 28 H -0.170 1.170 29 H 0.178 0.822 30 H 0.232 0.768 31 H 0.096 0.904 32 H 0.090 0.910 33 H 0.093 0.907 34 H 0.095 0.905 35 H 0.227 0.773 36 H 0.093 0.907 37 H 0.087 0.913 38 H 0.084 0.916 39 H 0.091 0.909 40 H 0.215 0.785 41 H 0.197 0.803 42 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -1.215 3.166 4.243 5.431 hybrid contribution -0.136 -1.536 -0.371 1.586 sum -1.351 1.629 3.872 4.412 Atomic orbital electron populations 1.86609 1.16308 1.81655 1.49093 1.25165 0.85593 1.10342 0.96715 0.95018 0.81485 0.75952 0.87761 1.20510 0.95964 0.94971 0.95934 1.20706 0.98282 0.94496 0.98112 1.19266 0.95609 0.94082 0.86193 1.19637 1.16178 1.03740 0.93603 1.16839 0.77421 0.79352 0.87299 1.90786 1.61255 1.72164 1.18566 1.45755 1.53063 1.28877 1.09968 1.20996 0.92153 0.91197 0.91414 0.89057 1.21770 0.96720 0.99088 0.98615 1.21401 0.98098 0.96388 0.98887 1.21854 0.92486 0.91322 0.89937 0.92627 1.86516 1.44424 1.48167 1.58308 1.22227 0.97536 0.99751 0.99277 1.21860 0.98988 0.96986 0.98746 1.24065 0.94275 0.95798 0.91944 1.77635 1.18583 1.06352 1.10715 1.46100 1.32252 1.18980 1.05765 1.21603 0.91802 0.85082 1.01932 1.20720 1.04191 1.02684 0.90224 0.77405 0.85998 1.17868 1.17049 0.82161 0.76822 0.90370 0.91001 0.90737 0.90536 0.77324 0.90728 0.91318 0.91589 0.90883 0.78484 0.80337 0.81570 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.61 12.87 -35.23 -0.45 0.15 16 2 C -0.07 0.09 2.84 36.00 0.10 0.19 16 3 Si 0.70 -1.60 31.96 -169.99 -5.43 -7.03 16 4 C -0.07 0.05 4.53 -104.55 -0.47 -0.42 16 5 C -0.10 -0.20 9.35 -39.53 -0.37 -0.57 16 6 C 0.17 0.50 6.76 -84.07 -0.57 -0.07 16 7 C -0.32 -0.83 6.17 -104.68 -0.65 -1.48 16 8 C 0.60 1.97 7.75 -12.90 -0.10 1.87 16 9 O -0.55 -3.62 15.37 5.17 0.08 -3.54 16 10 N -0.73 0.00 5.07 -55.15 -0.28 -0.28 16 11 C 0.15 0.02 2.46 -67.93 -0.17 -0.15 16 12 H 0.09 0.21 7.57 -51.93 -0.39 -0.18 16 13 C -0.12 0.21 5.39 -26.73 -0.14 0.06 16 14 C -0.11 0.04 5.57 -26.74 -0.15 -0.11 16 15 C 0.10 -0.02 3.47 -26.73 -0.09 -0.11 16 16 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 17 O -0.57 -0.64 13.32 -35.23 -0.47 -1.11 16 18 C -0.15 0.03 5.55 -26.75 -0.15 -0.12 16 19 C -0.13 -0.02 5.49 -26.76 -0.15 -0.17 16 20 C 0.12 0.08 11.44 -17.14 -0.20 -0.12 16 21 N -0.31 -0.75 12.57 30.75 0.39 -0.36 16 22 N -0.27 -0.48 3.86 -10.54 -0.04 -0.52 16 23 C 0.12 -0.22 11.18 -16.67 -0.19 -0.40 16 24 C -0.16 0.53 8.38 -39.94 -0.33 0.19 16 25 H 0.38 -2.23 8.08 45.56 0.37 -1.86 16 26 H 0.12 -0.06 7.70 -51.93 -0.40 -0.46 16 27 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 28 H -0.25 -0.23 7.11 56.52 0.40 0.18 16 29 H 0.16 0.46 7.01 -52.49 -0.37 0.09 16 30 H 0.40 -1.15 7.52 -40.82 -0.31 -1.46 16 31 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 32 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 33 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 34 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 35 H 0.38 -1.01 9.08 45.56 0.41 -0.60 16 36 H 0.07 0.08 8.14 -51.93 -0.42 -0.35 16 37 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 38 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 39 H 0.07 0.17 8.14 -51.93 -0.42 -0.26 16 40 H 0.20 -0.72 7.46 -52.49 -0.39 -1.11 16 41 H 0.18 -0.87 8.06 -52.49 -0.42 -1.29 16 42 H 0.17 -1.33 7.31 -52.49 -0.38 -1.71 16 LS Contribution 348.63 15.07 5.25 5.25 Total: 0.00 -11.70 348.63 -9.46 -21.16 By element: Atomic # 1 Polarization: -7.44 SS G_CDS: -4.89 Total: -12.33 kcal Atomic # 6 Polarization: 2.22 SS G_CDS: -3.62 Total: -1.40 kcal Atomic # 7 Polarization: -1.22 SS G_CDS: 0.07 Total: -1.16 kcal Atomic # 8 Polarization: -3.65 SS G_CDS: -0.84 Total: -4.50 kcal Atomic # 14 Polarization: -1.60 SS G_CDS: -5.43 Total: -7.03 kcal Total LS contribution 5.25 Total: 5.25 kcal Total: -11.70 -9.46 -21.16 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_11618758.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.508 kcal (2) G-P(sol) polarization free energy of solvation -11.697 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.189 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.462 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.159 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.651 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds