Wall clock time and date at job start Sat Mar 6 2021 14:58:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35654 * 117.00166 * 2 1 4 4 C 1.38396 * 120.12173 * 359.97438 * 3 2 1 5 5 C 1.38726 * 120.03196 * 180.02562 * 4 3 2 6 6 O 1.35718 * 119.86215 * 179.97438 * 5 4 3 7 7 C 1.42901 * 117.00056 * 0.02562 * 6 5 4 8 8 C 1.39147 * 120.27602 * 0.02562 * 5 4 3 9 9 C 1.50697 * 119.88258 * 179.97438 * 8 5 4 10 10 O 1.42906 * 109.47109 * 74.99362 * 9 8 5 11 11 Si 1.86295 * 109.47023 * 194.99830 * 9 8 5 12 12 C 1.37586 * 120.23718 * 359.73320 * 8 5 4 13 13 C 1.39822 * 119.96407 * 0.51744 * 12 8 5 14 14 C 1.47295 * 120.13837 * 179.76306 * 13 12 8 15 15 O 1.21619 * 120.00592 * 179.45020 * 14 13 12 16 16 N 1.34784 * 119.99812 * 359.72328 * 14 13 12 17 17 C 1.46499 * 119.99893 * 179.72659 * 16 14 13 18 18 H 1.08990 * 109.47400 * 34.99963 * 17 16 14 19 19 C 1.52997 * 109.46833 * 155.00334 * 17 16 14 20 20 C 1.53000 * 109.47104 * 179.97438 * 19 17 16 21 21 C 1.53002 * 109.47085 * 299.99889 * 20 19 17 22 22 H 1.09007 * 109.46938 * 299.99813 * 21 20 19 23 23 O 1.42895 * 109.47484 * 180.02562 * 21 20 19 24 24 C 1.53000 * 109.47269 * 59.99579 * 21 20 19 25 25 C 1.52998 * 109.46843 * 274.99901 * 17 16 14 26 26 H 1.08998 * 109.47038 * 300.00758 * 1 2 3 27 27 H 1.09002 * 109.46481 * 60.00008 * 1 2 3 28 28 H 1.08994 * 109.47547 * 179.97438 * 1 2 3 29 29 H 1.08003 * 119.98331 * 0.02562 * 4 3 2 30 30 H 1.09005 * 109.46742 * 179.97438 * 7 6 5 31 31 H 1.09002 * 109.47073 * 299.99610 * 7 6 5 32 32 H 1.08991 * 109.46967 * 60.00007 * 7 6 5 33 33 H 1.09007 * 109.46857 * 314.99742 * 9 8 5 34 34 H 0.96701 * 113.99379 * 60.00279 * 10 9 8 35 35 H 1.48505 * 110.00027 * 180.02562 * 11 9 8 36 36 H 1.48501 * 109.99819 * 301.31276 * 11 9 8 37 37 H 1.08001 * 120.02079 * 180.25964 * 12 8 5 38 38 H 0.97005 * 119.99846 * 359.72447 * 16 14 13 39 39 H 1.09002 * 109.46979 * 299.99327 * 19 17 16 40 40 H 1.08995 * 109.47843 * 59.99844 * 19 17 16 41 41 H 1.08997 * 109.47552 * 59.99439 * 20 19 17 42 42 H 1.09005 * 109.47655 * 179.97438 * 20 19 17 43 43 H 0.96704 * 114.00556 * 179.97438 * 23 21 20 44 44 H 1.09002 * 109.46537 * 60.00437 * 24 21 20 45 45 H 1.09002 * 109.47190 * 180.02562 * 24 21 20 46 46 H 1.09007 * 109.47248 * 300.00110 * 25 17 16 47 47 H 1.08997 * 109.47450 * 60.00399 * 25 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2937 2.3710 -0.0005 5 6 1.9255 3.6060 -0.0011 6 8 1.1854 4.7436 -0.0021 7 6 -0.2357 4.5931 -0.0021 8 6 3.3148 3.6833 -0.0016 9 6 3.9919 5.0296 -0.0028 10 8 3.8947 5.6128 1.2982 11 14 5.7864 4.8218 -0.4578 12 6 4.0726 2.5350 0.0039 13 6 3.4463 1.2849 -0.0008 14 6 4.2539 0.0531 -0.0002 15 8 3.7066 -1.0330 0.0058 16 7 5.5995 0.1295 -0.0007 17 6 6.4028 -1.0956 0.0060 18 1 5.8980 -1.8642 -0.5792 19 6 7.7757 -0.8086 -0.6052 20 6 8.6148 -2.0879 -0.5977 21 6 8.7893 -2.5749 0.8422 22 1 9.2940 -1.8059 1.4272 23 8 9.5736 -3.7694 0.8494 24 6 7.4164 -2.8618 1.4535 25 6 6.5773 -1.5831 1.4457 26 1 -0.3633 0.5139 0.8899 27 1 -0.3632 0.5139 -0.8900 28 1 -0.3634 -1.0276 -0.0005 29 1 0.2150 2.3165 -0.0005 30 1 -0.7052 5.5769 -0.0025 31 1 -0.5428 4.0432 -0.8916 32 1 -0.5429 4.0447 0.8883 33 1 3.5056 5.6802 -0.7298 34 1 4.3071 5.0866 1.9969 35 1 6.4656 6.1424 -0.4619 36 1 6.4530 3.9115 0.5077 37 1 5.1507 2.5991 0.0077 38 1 6.0361 0.9958 -0.0055 39 1 7.6513 -0.4613 -1.6309 40 1 8.2805 -0.0400 -0.0201 41 1 8.1103 -2.8569 -1.1826 42 1 9.5929 -1.8836 -1.0335 43 1 9.7253 -4.1351 1.7317 44 1 6.9119 -3.6308 0.8685 45 1 7.5407 -3.2083 2.4795 46 1 7.0821 -0.8144 2.0309 47 1 5.5993 -1.7876 1.8812 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_12297780.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:58:53 Heat of formation + Delta-G solvation = -165.073006 kcal Electronic energy + Delta-G solvation = -30593.034045 eV Core-core repulsion = 26322.099317 eV Total energy + Delta-G solvation = -4270.934728 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -42.12440 -40.92407 -40.08833 -39.38583 -38.51082 -37.09614 -36.91612 -34.49323 -32.27148 -31.89706 -31.83689 -29.33869 -28.97837 -28.03161 -26.13310 -24.79106 -23.84668 -23.34224 -22.42887 -21.51502 -20.96775 -20.05452 -18.85276 -18.29434 -18.15906 -18.01162 -17.27505 -17.16689 -16.68313 -16.61205 -16.31314 -16.15702 -15.90830 -15.78333 -15.58790 -15.47903 -15.31922 -14.78559 -14.67255 -14.22844 -14.21608 -13.94692 -13.56018 -13.34780 -13.25405 -13.16866 -12.95418 -12.69191 -12.55046 -12.53326 -12.41772 -12.20801 -12.16226 -11.78970 -11.72267 -11.66995 -11.26478 -10.93140 -10.74460 -10.53949 -10.11542 -9.92526 -9.19848 -4.89434 -0.26175 0.07490 1.31817 1.56196 1.73364 1.99106 2.07760 2.12046 2.17718 2.60349 3.28886 3.43432 3.47007 3.56833 3.64845 3.73133 3.74297 3.80378 4.03336 4.11448 4.12042 4.17520 4.23089 4.23624 4.26199 4.27362 4.29339 4.32726 4.41866 4.45357 4.56663 4.62816 4.66817 4.67300 4.75416 4.88846 4.91330 4.99967 5.03054 5.03528 5.11514 5.14628 5.27450 5.29706 5.34857 5.51360 6.03139 6.28514 6.54126 6.56700 6.87584 7.25579 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.305 6.305 3 C 0.217 3.783 4 C -0.311 4.311 5 C 0.215 3.785 6 O -0.312 6.312 7 C 0.012 3.988 8 C -0.197 4.197 9 C -0.072 4.072 10 O -0.546 6.546 11 Si 0.761 3.239 12 C 0.001 3.999 13 C -0.227 4.227 14 C 0.564 3.436 15 O -0.564 6.564 16 N -0.715 5.715 17 C 0.146 3.854 18 H 0.066 0.934 19 C -0.115 4.115 20 C -0.111 4.111 21 C 0.103 3.897 22 H 0.071 0.929 23 O -0.589 6.589 24 C -0.144 4.144 25 C -0.122 4.122 26 H 0.070 0.930 27 H 0.073 0.927 28 H 0.112 0.888 29 H 0.162 0.838 30 H 0.119 0.881 31 H 0.072 0.928 32 H 0.066 0.934 33 H 0.113 0.887 34 H 0.384 0.616 35 H -0.301 1.301 36 H -0.252 1.252 37 H 0.163 0.837 38 H 0.410 0.590 39 H 0.090 0.910 40 H 0.093 0.907 41 H 0.058 0.942 42 H 0.081 0.919 43 H 0.393 0.607 44 H 0.056 0.944 45 H 0.077 0.923 46 H 0.081 0.919 47 H 0.047 0.953 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.310 3.131 -0.491 3.185 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 O -0.216 6.216 3 C 0.168 3.832 4 C -0.330 4.330 5 C 0.167 3.833 6 O -0.223 6.223 7 C -0.082 4.082 8 C -0.198 4.198 9 C -0.180 4.180 10 O -0.354 6.354 11 Si 0.664 3.336 12 C -0.017 4.017 13 C -0.231 4.231 14 C 0.353 3.647 15 O -0.444 6.444 16 N -0.368 5.368 17 C 0.041 3.959 18 H 0.084 0.916 19 C -0.153 4.153 20 C -0.149 4.149 21 C 0.045 3.955 22 H 0.089 0.911 23 O -0.397 6.397 24 C -0.183 4.183 25 C -0.161 4.161 26 H 0.088 0.912 27 H 0.091 0.909 28 H 0.130 0.870 29 H 0.180 0.820 30 H 0.137 0.863 31 H 0.090 0.910 32 H 0.084 0.916 33 H 0.131 0.869 34 H 0.232 0.768 35 H -0.229 1.229 36 H -0.177 1.177 37 H 0.180 0.820 38 H 0.248 0.752 39 H 0.109 0.891 40 H 0.111 0.889 41 H 0.077 0.923 42 H 0.099 0.901 43 H 0.243 0.757 44 H 0.075 0.925 45 H 0.095 0.905 46 H 0.100 0.900 47 H 0.066 0.934 Dipole moment (debyes) X Y Z Total from point charges -0.091 3.018 -1.210 3.252 hybrid contribution -1.080 0.059 1.883 2.172 sum -1.171 3.077 0.674 3.361 Atomic orbital electron populations 1.23467 0.76555 1.05720 1.02644 1.86366 1.23179 1.25971 1.86039 1.18994 0.91142 0.84669 0.88402 1.21414 1.01980 0.90781 1.18861 1.18940 0.90984 0.84854 0.88569 1.86145 1.21033 1.28687 1.86474 1.23462 0.76313 1.05832 1.02591 1.19500 0.90767 0.96577 1.12992 1.25120 1.12691 0.92373 0.87843 1.86619 1.80755 1.50775 1.17280 0.94291 0.71048 0.79512 0.88737 1.21009 1.00297 0.88857 0.91586 1.19145 0.90756 0.93833 1.19333 1.18068 0.82567 0.88357 0.75733 1.90820 1.72359 1.30317 1.50858 1.45842 1.05074 1.10349 1.75537 1.20992 0.91810 0.86564 0.96500 0.91585 1.21734 0.92570 0.98056 1.02947 1.21427 1.00976 0.97118 0.95428 1.21913 0.89707 0.86727 0.97199 0.91121 1.86482 1.73903 1.43333 1.36011 1.22169 0.96483 0.97709 1.01902 1.21797 0.99690 0.97838 0.96785 0.91179 0.90891 0.86959 0.82043 0.86311 0.90976 0.91560 0.86923 0.76750 1.22859 1.17708 0.81971 0.75203 0.89142 0.88892 0.92269 0.90085 0.75702 0.92545 0.90462 0.90027 0.93425 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 9.81 113.37 1.11 1.10 16 2 O -0.30 -2.59 8.56 -68.73 -0.59 -3.18 16 3 C 0.22 1.31 6.70 22.82 0.15 1.46 16 4 C -0.31 -0.49 8.01 22.42 0.18 -0.31 16 5 C 0.21 0.48 6.67 22.60 0.15 0.63 16 6 O -0.31 -0.65 9.80 -90.40 -0.89 -1.53 16 7 C 0.01 -0.06 9.80 113.37 1.11 1.05 16 8 C -0.20 -0.07 5.27 -19.80 -0.10 -0.17 16 9 C -0.07 0.04 2.37 71.24 0.17 0.21 16 10 O -0.55 -1.47 12.88 -148.98 -1.92 -3.39 16 11 Si 0.76 -3.74 30.25 68.60 2.07 -1.66 16 12 C 0.00 0.00 8.14 22.50 0.18 0.18 16 13 C -0.23 -1.09 5.89 -20.00 -0.12 -1.20 16 14 C 0.56 4.40 7.72 86.62 0.67 5.07 16 15 O -0.56 -9.40 14.81 16.87 0.25 -9.15 16 16 N -0.72 -0.24 5.03 -445.94 -2.24 -2.48 16 17 C 0.15 0.12 2.46 44.99 0.11 0.23 16 18 H 0.07 0.44 7.58 -2.39 -0.02 0.42 16 19 C -0.12 0.53 5.39 30.59 0.16 0.70 16 20 C -0.11 0.14 5.57 30.59 0.17 0.31 16 21 C 0.10 -0.10 3.47 30.59 0.11 0.01 16 22 H 0.07 -0.27 8.14 -2.38 -0.02 -0.29 16 23 O -0.59 -1.12 13.32 -148.98 -1.98 -3.11 16 24 C -0.14 -0.01 5.54 30.58 0.17 0.15 16 25 C -0.12 -0.11 5.49 30.58 0.17 0.06 16 26 H 0.07 -0.29 7.66 -2.39 -0.02 -0.31 16 27 H 0.07 -0.33 7.66 -2.39 -0.02 -0.35 16 28 H 0.11 -0.31 8.14 -2.39 -0.02 -0.33 16 29 H 0.16 -0.52 4.50 -2.91 -0.01 -0.54 16 30 H 0.12 -0.93 8.14 -2.38 -0.02 -0.94 16 31 H 0.07 -0.55 7.65 -2.39 -0.02 -0.56 16 32 H 0.07 -0.43 7.65 -2.39 -0.02 -0.45 16 33 H 0.11 0.02 7.82 -2.38 -0.02 0.00 16 34 H 0.38 -1.45 8.70 -74.06 -0.64 -2.09 16 35 H -0.30 -1.01 7.11 99.48 0.71 -0.30 16 36 H -0.25 1.44 6.67 99.48 0.66 2.10 16 37 H 0.16 -1.15 3.17 -2.91 -0.01 -1.16 16 38 H 0.41 -2.56 6.62 -92.70 -0.61 -3.17 16 39 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 40 H 0.09 -0.78 8.14 -2.39 -0.02 -0.80 16 41 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 42 H 0.08 -0.15 8.14 -2.38 -0.02 -0.17 16 43 H 0.39 -2.26 9.08 -74.05 -0.67 -2.93 16 44 H 0.06 0.22 8.14 -2.39 -0.02 0.20 16 45 H 0.08 -0.14 8.14 -2.39 -0.02 -0.16 16 46 H 0.08 -0.19 8.14 -2.38 -0.02 -0.21 16 47 H 0.05 0.31 8.14 -2.39 -0.02 0.29 16 Total: 0.00 -25.47 374.35 -1.80 -27.28 By element: Atomic # 1 Polarization: -11.33 SS G_CDS: -0.91 Total: -12.24 kcal Atomic # 6 Polarization: 5.07 SS G_CDS: 4.39 Total: 9.46 kcal Atomic # 7 Polarization: -0.24 SS G_CDS: -2.24 Total: -2.48 kcal Atomic # 8 Polarization: -15.23 SS G_CDS: -5.13 Total: -20.36 kcal Atomic # 14 Polarization: -3.74 SS G_CDS: 2.07 Total: -1.66 kcal Total: -25.47 -1.80 -27.28 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_12297780.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -137.794 kcal (2) G-P(sol) polarization free energy of solvation -25.474 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -163.268 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.805 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.279 kcal (6) G-S(sol) free energy of system = (1) + (5) -165.073 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds