Wall clock time and date at job start Sat Mar 6 2021 14:58:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86310 * 109.47132 * 2 1 4 4 C 1.50699 * 109.47216 * 119.99735 * 2 1 3 5 5 C 1.38422 * 119.89376 * 245.02482 * 4 2 1 6 6 C 1.38248 * 120.33763 * 179.97438 * 5 4 2 7 7 C 1.38276 * 120.11460 * 359.76376 * 6 5 4 8 8 F 1.35107 * 120.10269 * 180.25831 * 7 6 5 9 9 C 1.39853 * 119.78678 * 0.48726 * 7 6 5 10 10 C 1.47698 * 120.17078 * 179.76639 * 9 7 6 11 11 O 1.21568 * 119.99886 * 359.72904 * 10 9 7 12 12 N 1.34778 * 120.00059 * 179.72521 * 10 9 7 13 13 C 1.46499 * 119.99771 * 179.97438 * 12 10 9 14 14 H 1.08992 * 109.47397 * 325.00275 * 13 12 10 15 15 C 1.53002 * 109.46799 * 85.00174 * 13 12 10 16 16 C 1.52997 * 109.46817 * 179.97438 * 15 13 12 17 17 C 1.53005 * 109.47452 * 300.00239 * 16 15 13 18 18 H 1.09002 * 109.46935 * 300.00125 * 17 16 15 19 19 O 1.42900 * 109.47304 * 180.02562 * 17 16 15 20 20 C 1.52999 * 109.47159 * 59.99536 * 17 16 15 21 21 C 1.52997 * 109.47317 * 300.00546 * 20 17 16 22 22 C 1.37901 * 119.89116 * 65.00132 * 4 2 1 23 23 H 0.96701 * 114.00179 * 299.99884 * 1 2 3 24 24 H 1.08996 * 109.47262 * 240.00130 * 2 1 3 25 25 H 1.48502 * 109.99893 * 299.99831 * 3 2 1 26 26 H 1.48500 * 109.99903 * 61.31991 * 3 2 1 27 27 H 1.07995 * 119.82739 * 359.97438 * 5 4 2 28 28 H 1.07999 * 119.93387 * 179.97438 * 6 5 4 29 29 H 0.97006 * 119.99662 * 0.02562 * 12 10 9 30 30 H 1.08993 * 109.47662 * 299.99952 * 15 13 12 31 31 H 1.09002 * 109.47075 * 60.00457 * 15 13 12 32 32 H 1.09002 * 109.47153 * 60.00231 * 16 15 13 33 33 H 1.09001 * 109.47289 * 180.02562 * 16 15 13 34 34 H 0.96700 * 113.99696 * 179.97438 * 19 17 16 35 35 H 1.08996 * 109.46929 * 179.97438 * 20 17 16 36 36 H 1.09002 * 109.46716 * 60.00455 * 20 17 16 37 37 H 1.09002 * 109.47153 * 299.99641 * 21 20 17 38 38 H 1.09001 * 109.46832 * 179.97438 * 21 20 17 39 39 H 1.08000 * 120.05449 * 359.97438 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.6390 -0.0090 2.1914 6 6 3.1036 -0.6513 3.3240 7 6 2.8593 -2.0001 3.5061 8 9 3.3090 -2.6265 4.6155 9 6 2.1494 -2.7147 2.5359 10 6 1.8881 -4.1568 2.7193 11 8 2.2947 -4.7266 3.7133 12 7 1.1988 -4.8410 1.7849 13 6 0.9402 -6.2715 1.9666 14 1 1.7909 -6.7338 2.4670 15 6 -0.3163 -6.4582 2.8194 16 6 -0.5868 -7.9521 3.0087 17 6 -0.7949 -8.6099 1.6430 18 1 -1.6456 -8.1471 1.1427 19 8 -1.0481 -10.0051 1.8198 20 6 0.4616 -8.4230 0.7902 21 6 0.7320 -6.9291 0.6009 22 6 1.6840 -2.0569 1.3957 23 1 -0.3933 0.4417 0.7650 24 1 1.7923 -0.5138 -0.8899 25 1 1.5615 2.4680 -1.2085 26 1 1.5879 2.4586 1.2242 27 1 2.8291 1.0454 2.0556 28 1 3.6554 -0.0978 4.0693 29 1 0.8747 -4.3864 0.9916 30 1 -0.1683 -5.9893 3.7921 31 1 -1.1671 -5.9959 2.3189 32 1 0.2639 -8.4149 3.5089 33 1 -1.4822 -8.0852 3.6158 34 1 -1.1903 -10.4868 0.9935 35 1 0.3135 -8.8920 -0.1825 36 1 1.3123 -8.8858 1.2904 37 1 -0.1187 -6.4664 0.1006 38 1 1.6275 -6.7961 -0.0063 39 1 1.1309 -2.6014 0.6448 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_12335834.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:58:58 Heat of formation + Delta-G solvation = -139.505427 kcal Electronic energy + Delta-G solvation = -24039.641779 eV Core-core repulsion = 20248.801390 eV Total energy + Delta-G solvation = -3790.840389 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.126 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -49.86793 -41.49201 -40.42509 -39.40226 -37.73703 -36.97315 -34.65543 -32.75714 -32.39874 -31.96248 -29.35827 -26.77563 -25.54974 -24.01102 -23.69414 -22.57734 -21.55568 -21.01896 -19.33178 -18.43799 -18.32232 -18.25065 -17.67705 -16.91846 -16.83542 -16.48432 -16.27459 -16.01645 -15.74823 -15.64521 -15.44746 -14.94308 -14.84169 -14.50962 -14.38284 -14.16250 -13.68133 -13.61081 -13.37071 -13.22872 -12.92605 -12.80030 -12.50423 -12.41440 -12.21324 -11.93839 -11.84084 -11.30591 -11.08568 -10.86334 -10.73050 -10.43850 -10.12177 -9.88774 -5.11984 -0.53780 -0.13528 1.08537 1.42546 1.63894 1.81716 1.93589 2.45648 2.98998 3.13437 3.17247 3.32874 3.38493 3.45178 3.56859 3.58275 3.84304 3.94077 3.98279 4.03208 4.10804 4.26311 4.28858 4.29814 4.34578 4.42961 4.55281 4.63254 4.72933 4.76407 4.82856 4.88049 4.92190 5.00602 5.01160 5.11233 5.18124 5.27192 5.41055 5.51056 6.19825 6.35559 6.66935 7.11777 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.073 4.073 3 Si 0.686 3.314 4 C -0.139 4.139 5 C -0.062 4.062 6 C -0.157 4.157 7 C 0.167 3.833 8 F -0.111 7.111 9 C -0.175 4.175 10 C 0.559 3.441 11 O -0.518 6.518 12 N -0.722 5.722 13 C 0.144 3.856 14 H 0.094 0.906 15 C -0.127 4.127 16 C -0.111 4.111 17 C 0.103 3.897 18 H 0.056 0.944 19 O -0.567 6.567 20 C -0.148 4.148 21 C -0.124 4.124 22 C -0.031 4.031 23 H 0.378 0.622 24 H 0.123 0.877 25 H -0.254 1.254 26 H -0.257 1.257 27 H 0.142 0.858 28 H 0.150 0.850 29 H 0.400 0.600 30 H 0.076 0.924 31 H 0.067 0.933 32 H 0.074 0.926 33 H 0.074 0.926 34 H 0.379 0.621 35 H 0.072 0.928 36 H 0.076 0.924 37 H 0.071 0.929 38 H 0.075 0.925 39 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.311 3.169 -5.270 6.157 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.183 4.183 3 Si 0.587 3.413 4 C -0.139 4.139 5 C -0.079 4.079 6 C -0.175 4.175 7 C 0.147 3.853 8 F -0.088 7.088 9 C -0.179 4.179 10 C 0.346 3.654 11 O -0.394 6.394 12 N -0.374 5.374 13 C 0.040 3.960 14 H 0.112 0.888 15 C -0.166 4.166 16 C -0.149 4.149 17 C 0.044 3.956 18 H 0.074 0.926 19 O -0.373 6.373 20 C -0.187 4.187 21 C -0.162 4.162 22 C -0.049 4.049 23 H 0.226 0.774 24 H 0.140 0.860 25 H -0.179 1.179 26 H -0.182 1.182 27 H 0.159 0.841 28 H 0.168 0.832 29 H 0.235 0.765 30 H 0.095 0.905 31 H 0.086 0.914 32 H 0.093 0.907 33 H 0.093 0.907 34 H 0.226 0.774 35 H 0.091 0.909 36 H 0.094 0.906 37 H 0.090 0.910 38 H 0.094 0.906 39 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 0.572 3.404 -4.424 5.612 hybrid contribution -1.194 -0.152 -0.284 1.237 sum -0.622 3.253 -4.709 5.757 Atomic orbital electron populations 1.86616 1.17411 1.79961 1.49478 1.25017 0.84164 1.11184 0.97929 0.94950 0.91530 0.74201 0.80649 1.20265 1.01305 0.94513 0.97854 1.21149 0.94541 1.00109 0.92138 1.21173 1.03613 0.92612 1.00142 1.17761 0.93972 0.90444 0.83144 1.91636 1.85893 1.82336 1.48977 1.20083 1.05826 0.94636 0.97346 1.17978 0.78250 0.85921 0.83258 1.90878 1.50531 1.69736 1.28271 1.45940 1.57048 1.10464 1.23956 1.21081 0.98811 0.79744 0.96383 0.88834 1.21889 0.97446 0.96017 1.01204 1.21428 1.03316 0.94079 0.96069 1.21858 0.95529 0.81965 0.96259 0.92600 1.86541 1.94100 1.20563 1.36060 1.22218 0.99733 0.95883 1.00843 1.21750 1.02774 0.95594 0.96121 1.21030 0.95175 0.93785 0.94958 0.77417 0.85958 1.17864 1.18233 0.84058 0.83250 0.76483 0.90525 0.91418 0.90742 0.90697 0.77383 0.90942 0.90552 0.91025 0.90638 0.84381 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.71 12.83 -35.23 -0.45 0.26 16 2 C -0.07 0.21 2.80 36.01 0.10 0.31 16 3 Si 0.69 -2.13 29.87 -169.99 -5.08 -7.21 16 4 C -0.14 0.32 5.35 -104.68 -0.56 -0.24 16 5 C -0.06 0.15 8.66 -39.51 -0.34 -0.19 16 6 C -0.16 0.16 10.01 -39.56 -0.40 -0.23 16 7 C 0.17 0.31 7.29 -38.96 -0.28 0.03 16 8 F -0.11 -0.52 15.55 2.25 0.04 -0.49 16 9 C -0.17 -0.19 5.88 -104.91 -0.62 -0.81 16 10 C 0.56 1.55 7.73 -12.40 -0.10 1.45 16 11 O -0.52 -3.57 15.00 5.31 0.08 -3.49 16 12 N -0.72 0.29 5.03 -54.80 -0.28 0.02 16 13 C 0.14 -0.02 2.45 -67.93 -0.17 -0.19 16 14 H 0.09 0.19 7.58 -51.93 -0.39 -0.21 16 15 C -0.13 -0.03 5.49 -26.73 -0.15 -0.17 16 16 C -0.11 -0.07 5.57 -26.73 -0.15 -0.22 16 17 C 0.10 -0.04 3.47 -26.73 -0.09 -0.14 16 18 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 19 O -0.57 -0.51 13.32 -35.23 -0.47 -0.98 16 20 C -0.15 0.25 5.55 -26.73 -0.15 0.10 16 21 C -0.12 0.28 5.39 -26.73 -0.14 0.14 16 22 C -0.03 0.05 9.17 -39.19 -0.36 -0.31 16 23 H 0.38 -1.47 8.70 45.56 0.40 -1.08 16 24 H 0.12 -0.47 7.96 -51.93 -0.41 -0.88 16 25 H -0.25 -0.14 7.11 56.52 0.40 0.27 16 26 H -0.26 0.33 7.00 56.52 0.40 0.73 16 27 H 0.14 -0.64 4.81 -52.49 -0.25 -0.89 16 28 H 0.15 -0.43 8.06 -52.49 -0.42 -0.85 16 29 H 0.40 -1.24 6.63 -40.82 -0.27 -1.51 16 30 H 0.08 0.17 8.14 -51.93 -0.42 -0.26 16 31 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 32 H 0.07 0.13 8.14 -51.93 -0.42 -0.30 16 33 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 34 H 0.38 -1.20 9.08 45.56 0.41 -0.78 16 35 H 0.07 -0.20 8.14 -51.93 -0.42 -0.63 16 36 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 37 H 0.07 -0.23 8.14 -51.93 -0.42 -0.66 16 38 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 39 H 0.14 -0.49 6.40 -52.49 -0.34 -0.83 16 LS Contribution 323.03 15.07 4.87 4.87 Total: 0.00 -8.78 323.03 -8.98 -17.76 By element: Atomic # 1 Polarization: -5.98 SS G_CDS: -4.29 Total: -10.27 kcal Atomic # 6 Polarization: 2.93 SS G_CDS: -3.40 Total: -0.48 kcal Atomic # 7 Polarization: 0.29 SS G_CDS: -0.28 Total: 0.02 kcal Atomic # 8 Polarization: -3.37 SS G_CDS: -0.84 Total: -4.21 kcal Atomic # 9 Polarization: -0.52 SS G_CDS: 0.04 Total: -0.49 kcal Atomic # 14 Polarization: -2.13 SS G_CDS: -5.08 Total: -7.21 kcal Total LS contribution 4.87 Total: 4.87 kcal Total: -8.78 -8.98 -17.76 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_12335834.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.744 kcal (2) G-P(sol) polarization free energy of solvation -8.782 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -130.525 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.980 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.762 kcal (6) G-S(sol) free energy of system = (1) + (5) -139.505 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds