Wall clock time and date at job start Sat Mar 6 2021 14:58:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86310 * 109.47132 * 2 1 4 4 C 1.50699 * 109.47216 * 119.99735 * 2 1 3 5 5 C 1.38422 * 119.89376 * 245.02482 * 4 2 1 6 6 C 1.38248 * 120.33763 * 179.97438 * 5 4 2 7 7 C 1.38276 * 120.11460 * 359.76376 * 6 5 4 8 8 F 1.35107 * 120.10269 * 180.25831 * 7 6 5 9 9 C 1.39853 * 119.78678 * 0.48726 * 7 6 5 10 10 C 1.47698 * 120.17078 * 179.76639 * 9 7 6 11 11 O 1.21568 * 119.99886 * 359.72904 * 10 9 7 12 12 N 1.34778 * 120.00059 * 179.72521 * 10 9 7 13 13 C 1.46499 * 119.99771 * 179.97438 * 12 10 9 14 14 H 1.08992 * 109.47397 * 325.00275 * 13 12 10 15 15 C 1.53002 * 109.46799 * 85.00174 * 13 12 10 16 16 C 1.52997 * 109.46817 * 179.97438 * 15 13 12 17 17 C 1.53005 * 109.47452 * 300.00239 * 16 15 13 18 18 H 1.09002 * 109.46935 * 300.00125 * 17 16 15 19 19 O 1.42900 * 109.47304 * 180.02562 * 17 16 15 20 20 C 1.52999 * 109.47159 * 59.99536 * 17 16 15 21 21 C 1.52997 * 109.47317 * 300.00546 * 20 17 16 22 22 C 1.37901 * 119.89116 * 65.00132 * 4 2 1 23 23 H 0.96701 * 114.00179 * 299.99884 * 1 2 3 24 24 H 1.08996 * 109.47262 * 240.00130 * 2 1 3 25 25 H 1.48502 * 109.99893 * 299.99831 * 3 2 1 26 26 H 1.48500 * 109.99903 * 61.31991 * 3 2 1 27 27 H 1.07995 * 119.82739 * 359.97438 * 5 4 2 28 28 H 1.07999 * 119.93387 * 179.97438 * 6 5 4 29 29 H 0.97006 * 119.99662 * 0.02562 * 12 10 9 30 30 H 1.08993 * 109.47662 * 299.99952 * 15 13 12 31 31 H 1.09002 * 109.47075 * 60.00457 * 15 13 12 32 32 H 1.09002 * 109.47153 * 60.00231 * 16 15 13 33 33 H 1.09001 * 109.47289 * 180.02562 * 16 15 13 34 34 H 0.96700 * 113.99696 * 179.97438 * 19 17 16 35 35 H 1.08996 * 109.46929 * 179.97438 * 20 17 16 36 36 H 1.09002 * 109.46716 * 60.00455 * 20 17 16 37 37 H 1.09002 * 109.47153 * 299.99641 * 21 20 17 38 38 H 1.09001 * 109.46832 * 179.97438 * 21 20 17 39 39 H 1.08000 * 120.05449 * 359.97438 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.6390 -0.0090 2.1914 6 6 3.1036 -0.6513 3.3240 7 6 2.8593 -2.0001 3.5061 8 9 3.3090 -2.6265 4.6155 9 6 2.1494 -2.7147 2.5359 10 6 1.8881 -4.1568 2.7193 11 8 2.2947 -4.7266 3.7133 12 7 1.1988 -4.8410 1.7849 13 6 0.9402 -6.2715 1.9666 14 1 1.7909 -6.7338 2.4670 15 6 -0.3163 -6.4582 2.8194 16 6 -0.5868 -7.9521 3.0087 17 6 -0.7949 -8.6099 1.6430 18 1 -1.6456 -8.1471 1.1427 19 8 -1.0481 -10.0051 1.8198 20 6 0.4616 -8.4230 0.7902 21 6 0.7320 -6.9291 0.6009 22 6 1.6840 -2.0569 1.3957 23 1 -0.3933 0.4417 0.7650 24 1 1.7923 -0.5138 -0.8899 25 1 1.5615 2.4680 -1.2085 26 1 1.5879 2.4586 1.2242 27 1 2.8291 1.0454 2.0556 28 1 3.6554 -0.0978 4.0693 29 1 0.8747 -4.3864 0.9916 30 1 -0.1683 -5.9893 3.7921 31 1 -1.1671 -5.9959 2.3189 32 1 0.2639 -8.4149 3.5089 33 1 -1.4822 -8.0852 3.6158 34 1 -1.1903 -10.4868 0.9935 35 1 0.3135 -8.8920 -0.1825 36 1 1.3123 -8.8858 1.2904 37 1 -0.1187 -6.4664 0.1006 38 1 1.6275 -6.7961 -0.0063 39 1 1.1309 -2.6014 0.6448 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_12335834.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:58:57 Heat of formation + Delta-G solvation = -142.236422 kcal Electronic energy + Delta-G solvation = -24039.760204 eV Core-core repulsion = 20248.801390 eV Total energy + Delta-G solvation = -3790.958813 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.126 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -50.03128 -41.55512 -40.36048 -39.45520 -37.59781 -37.04057 -34.75171 -32.71022 -32.30233 -31.92423 -29.36467 -26.63152 -25.53499 -23.98089 -23.63079 -22.53689 -21.64663 -20.99981 -19.30761 -18.37900 -18.34249 -18.24286 -17.64580 -16.98776 -16.92280 -16.47370 -16.16332 -16.00386 -15.74851 -15.65117 -15.47366 -14.84425 -14.78096 -14.53427 -14.40117 -14.16782 -13.64415 -13.56747 -13.32409 -13.19584 -12.94120 -12.78533 -12.45939 -12.28213 -12.21839 -11.92142 -11.71599 -11.31574 -11.19948 -10.81727 -10.62436 -10.42770 -10.15042 -9.85720 -4.87569 -0.51332 -0.04241 1.31517 1.58396 1.62906 1.89405 2.01772 2.45796 3.03545 3.23148 3.33617 3.43233 3.52314 3.56336 3.61712 3.65903 3.97444 4.01092 4.07831 4.09338 4.15531 4.26800 4.31674 4.39615 4.46369 4.60095 4.62636 4.77370 4.79868 4.84909 4.91386 4.94157 4.97263 5.05429 5.07057 5.12817 5.18941 5.26750 5.38662 5.58463 6.34110 6.50177 6.88060 7.03075 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.074 4.074 3 Si 0.760 3.240 4 C -0.130 4.130 5 C -0.053 4.053 6 C -0.153 4.153 7 C 0.132 3.868 8 F -0.138 7.138 9 C -0.188 4.188 10 C 0.553 3.447 11 O -0.572 6.572 12 N -0.704 5.704 13 C 0.144 3.856 14 H 0.064 0.936 15 C -0.119 4.119 16 C -0.112 4.112 17 C 0.104 3.896 18 H 0.072 0.928 19 O -0.591 6.591 20 C -0.144 4.144 21 C -0.115 4.115 22 C -0.023 4.023 23 H 0.388 0.612 24 H 0.138 0.862 25 H -0.305 1.305 26 H -0.278 1.278 27 H 0.166 0.834 28 H 0.166 0.834 29 H 0.416 0.584 30 H 0.049 0.951 31 H 0.085 0.915 32 H 0.054 0.946 33 H 0.067 0.933 34 H 0.396 0.604 35 H 0.093 0.907 36 H 0.059 0.941 37 H 0.094 0.906 38 H 0.084 0.916 39 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.284 4.194 -7.544 8.636 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.183 4.183 3 Si 0.666 3.334 4 C -0.131 4.131 5 C -0.070 4.070 6 C -0.171 4.171 7 C 0.112 3.888 8 F -0.116 7.116 9 C -0.192 4.192 10 C 0.341 3.659 11 O -0.452 6.452 12 N -0.356 5.356 13 C 0.039 3.961 14 H 0.083 0.917 15 C -0.158 4.158 16 C -0.151 4.151 17 C 0.045 3.955 18 H 0.090 0.910 19 O -0.399 6.399 20 C -0.182 4.182 21 C -0.153 4.153 22 C -0.041 4.041 23 H 0.237 0.763 24 H 0.156 0.844 25 H -0.234 1.234 26 H -0.204 1.204 27 H 0.183 0.817 28 H 0.183 0.817 29 H 0.254 0.746 30 H 0.068 0.932 31 H 0.104 0.896 32 H 0.072 0.928 33 H 0.086 0.914 34 H 0.246 0.754 35 H 0.111 0.889 36 H 0.078 0.922 37 H 0.112 0.888 38 H 0.102 0.898 39 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -0.038 4.417 -6.734 8.053 hybrid contribution -1.062 -0.405 0.368 1.195 sum -1.100 4.012 -6.366 7.605 Atomic orbital electron populations 1.86598 1.18041 1.80255 1.50330 1.25155 0.83658 1.11391 0.98125 0.94119 0.90311 0.72297 0.76716 1.20397 1.00562 0.94171 0.97968 1.21421 0.93362 1.01082 0.91162 1.21375 1.03332 0.91427 1.00996 1.18234 0.95696 0.91782 0.83083 1.91561 1.86553 1.83043 1.50458 1.20058 1.06976 0.93728 0.98485 1.18370 0.77837 0.86770 0.82885 1.90846 1.52914 1.70918 1.30518 1.45812 1.55785 1.10304 1.23739 1.21054 0.97441 0.79851 0.97721 0.91740 1.21786 0.98258 0.95616 1.00104 1.21414 1.02088 0.94445 0.97108 1.21877 0.96728 0.81512 0.95376 0.90970 1.86496 1.94243 1.21350 1.37846 1.22180 0.98406 0.96309 1.01351 1.21715 1.04126 0.94980 0.94491 1.21219 0.94533 0.94183 0.94190 0.76253 0.84394 1.23358 1.20418 0.81719 0.81685 0.74556 0.93245 0.89643 0.92752 0.91407 0.75442 0.88886 0.92217 0.88771 0.89760 0.82178 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 2.56 12.83 -148.98 -1.91 0.65 16 2 C -0.07 0.59 2.80 71.24 0.20 0.79 16 3 Si 0.76 -5.86 29.87 68.60 2.05 -3.81 16 4 C -0.13 0.84 5.35 -19.90 -0.11 0.73 16 5 C -0.05 0.35 8.66 22.32 0.19 0.54 16 6 C -0.15 0.35 10.01 22.28 0.22 0.57 16 7 C 0.13 0.68 7.29 22.67 0.17 0.85 16 8 F -0.14 -1.73 15.55 44.97 0.70 -1.04 16 9 C -0.19 -0.56 5.88 -20.05 -0.12 -0.68 16 10 C 0.55 4.08 7.73 86.74 0.67 4.75 16 11 O -0.57 -9.95 15.00 -3.93 -0.06 -10.00 16 12 N -0.70 0.29 5.03 -445.56 -2.24 -1.95 16 13 C 0.14 0.10 2.45 44.99 0.11 0.21 16 14 H 0.06 0.45 7.58 -2.39 -0.02 0.43 16 15 C -0.12 -0.21 5.49 30.59 0.17 -0.04 16 16 C -0.11 -0.33 5.57 30.60 0.17 -0.16 16 17 C 0.10 -0.11 3.47 30.60 0.11 0.00 16 18 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 19 O -0.59 -1.12 13.32 -148.98 -1.98 -3.10 16 20 C -0.14 0.58 5.55 30.59 0.17 0.75 16 21 C -0.12 0.65 5.39 30.59 0.16 0.82 16 22 C -0.02 0.10 9.17 22.52 0.21 0.31 16 23 H 0.39 -3.71 8.70 -74.06 -0.64 -4.35 16 24 H 0.14 -1.47 7.96 -2.39 -0.02 -1.49 16 25 H -0.31 -0.38 7.11 99.48 0.71 0.33 16 26 H -0.28 1.18 7.00 99.48 0.70 1.87 16 27 H 0.17 -1.90 4.81 -2.91 -0.01 -1.91 16 28 H 0.17 -1.01 8.06 -2.91 -0.02 -1.03 16 29 H 0.42 -3.11 6.63 -92.70 -0.62 -3.72 16 30 H 0.05 0.36 8.14 -2.39 -0.02 0.34 16 31 H 0.08 -0.16 8.14 -2.39 -0.02 -0.18 16 32 H 0.05 0.36 8.14 -2.39 -0.02 0.34 16 33 H 0.07 0.27 8.14 -2.39 -0.02 0.25 16 34 H 0.40 -2.71 9.08 -74.06 -0.67 -3.38 16 35 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 36 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 37 H 0.09 -0.89 8.14 -2.39 -0.02 -0.91 16 38 H 0.08 -0.56 8.14 -2.39 -0.02 -0.58 16 39 H 0.16 -1.52 6.40 -2.91 -0.02 -1.54 16 Total: 0.00 -24.54 323.03 -1.92 -26.46 By element: Atomic # 1 Polarization: -15.82 SS G_CDS: -0.80 Total: -16.62 kcal Atomic # 6 Polarization: 7.10 SS G_CDS: 2.32 Total: 9.42 kcal Atomic # 7 Polarization: 0.29 SS G_CDS: -2.24 Total: -1.95 kcal Atomic # 8 Polarization: -8.51 SS G_CDS: -3.95 Total: -12.46 kcal Atomic # 9 Polarization: -1.73 SS G_CDS: 0.70 Total: -1.04 kcal Atomic # 14 Polarization: -5.86 SS G_CDS: 2.05 Total: -3.81 kcal Total: -24.54 -1.92 -26.46 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_12335834.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -115.779 kcal (2) G-P(sol) polarization free energy of solvation -24.539 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -140.317 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.919 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.458 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.236 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds