Wall clock time and date at job start Sat Mar 6 2021 14:59:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86295 * 109.47118 * 2 1 4 4 C 1.50696 * 109.46644 * 119.99848 * 2 1 3 5 5 C 1.34451 * 126.48410 * 254.96965 * 4 2 1 6 6 N 1.36563 * 109.98862 * 180.02562 * 5 4 2 7 7 C 1.37824 * 109.85683 * 0.02562 * 6 5 4 8 8 C 1.38653 * 133.37303 * 180.30287 * 7 6 5 9 9 C 1.39330 * 119.66192 * 180.15039 * 8 7 6 10 10 C 1.47577 * 119.83071 * 179.76398 * 9 8 7 11 11 O 1.21592 * 119.99929 * 359.72990 * 10 9 8 12 12 N 1.34770 * 119.99922 * 179.72491 * 10 9 8 13 13 C 1.46500 * 120.00256 * 180.02562 * 12 10 9 14 14 H 1.08998 * 109.46845 * 325.00694 * 13 12 10 15 15 C 1.53006 * 109.47249 * 84.99846 * 13 12 10 16 16 C 1.52997 * 109.47164 * 180.02562 * 15 13 12 17 17 C 1.53002 * 109.46978 * 299.99874 * 16 15 13 18 18 H 1.08992 * 109.47056 * 300.00064 * 17 16 15 19 19 O 1.42903 * 109.46797 * 180.02562 * 17 16 15 20 20 C 1.52996 * 109.46891 * 60.00410 * 17 16 15 21 21 C 1.52997 * 109.47473 * 205.00145 * 13 12 10 22 22 C 1.40194 * 120.33389 * 359.49166 * 9 8 7 23 23 C 1.36235 * 120.38350 * 0.27760 * 22 9 8 24 24 C 1.39883 * 119.95641 * 359.97438 * 23 22 9 25 25 H 0.96698 * 114.00372 * 300.00316 * 1 2 3 26 26 H 1.08996 * 109.47154 * 239.99625 * 2 1 3 27 27 H 1.48503 * 109.99991 * 300.00050 * 3 2 1 28 28 H 1.48498 * 109.99963 * 61.31591 * 3 2 1 29 29 H 1.08001 * 125.00650 * 0.02737 * 5 4 2 30 30 H 0.97002 * 125.06997 * 180.02562 * 6 5 4 31 31 H 1.07997 * 120.17077 * 359.91674 * 8 7 6 32 32 H 0.97005 * 120.00370 * 0.02562 * 12 10 9 33 33 H 1.09001 * 109.47002 * 60.00085 * 15 13 12 34 34 H 1.09000 * 109.47050 * 300.00351 * 15 13 12 35 35 H 1.09002 * 109.47045 * 180.02562 * 16 15 13 36 36 H 1.09001 * 109.47375 * 59.99966 * 16 15 13 37 37 H 0.96699 * 114.00345 * 60.00309 * 19 17 16 38 38 H 1.09004 * 109.47368 * 179.97438 * 20 17 16 39 39 H 1.09001 * 109.47372 * 59.99964 * 20 17 16 40 40 H 1.09002 * 109.47153 * 59.99757 * 21 13 12 41 41 H 1.09001 * 109.46832 * 299.99948 * 21 13 12 42 42 H 1.08001 * 119.81189 * 180.24942 * 22 9 8 43 43 H 1.07995 * 120.02496 * 179.97438 * 23 22 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 2.4620 -0.1364 2.3243 6 7 2.8041 -1.0947 3.2351 7 6 2.4955 -2.3431 2.7393 8 6 2.6273 -3.6276 3.2445 9 6 2.2141 -4.7156 2.4785 10 6 2.3576 -6.0847 3.0104 11 8 2.8399 -6.2612 4.1125 12 7 1.9539 -7.1392 2.2747 13 6 2.0957 -8.4982 2.8029 14 1 3.0058 -8.5631 3.3992 15 6 0.8871 -8.8337 3.6791 16 6 1.0355 -10.2528 4.2312 17 6 1.1150 -11.2460 3.0701 18 1 0.2049 -11.1815 2.4739 19 8 1.2531 -12.5716 3.5859 20 6 2.3237 -10.9106 2.1941 21 6 2.1749 -9.4912 1.6415 22 6 1.6575 -4.5160 1.2073 23 6 1.5199 -3.2570 0.7053 24 6 1.9349 -2.1548 1.4601 25 1 -0.3934 0.4417 0.7650 26 1 1.7924 -0.5139 -0.8899 27 1 1.5615 2.4679 -1.2085 28 1 1.5879 2.4585 1.2242 29 1 2.5977 0.9262 2.4624 30 1 3.2045 -0.9225 4.1016 31 1 3.0517 -3.7842 4.2252 32 1 1.5693 -6.9983 1.3953 33 1 -0.0231 -8.7687 3.0829 34 1 0.8306 -8.1263 4.5065 35 1 0.1743 -10.4919 4.8551 36 1 1.9457 -10.3173 4.8275 37 1 0.5206 -12.8519 4.1515 38 1 2.3806 -11.6185 1.3671 39 1 3.2338 -10.9752 2.7904 40 1 3.0360 -9.2522 1.0173 41 1 1.2648 -9.4262 1.0453 42 1 1.3363 -5.3652 0.6224 43 1 1.0908 -3.1099 -0.2747 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_12335838.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:59:05 Heat of formation + Delta-G solvation = -64.424607 kcal Electronic energy + Delta-G solvation = -25902.479266 eV Core-core repulsion = 22106.932791 eV Total energy + Delta-G solvation = -3795.546475 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.146 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -42.49417 -41.11143 -39.63822 -37.99068 -37.53474 -36.90637 -34.45367 -33.27371 -31.91599 -30.96486 -30.71891 -29.05758 -26.54034 -24.89308 -23.92253 -23.60857 -22.90002 -21.40978 -20.99583 -20.78388 -19.40506 -18.45849 -18.19760 -17.86825 -17.20373 -16.92410 -16.46178 -16.19356 -15.96372 -15.69507 -15.55392 -15.42699 -15.15770 -14.80545 -14.74477 -14.65877 -14.51509 -14.14733 -13.88913 -13.37520 -13.29489 -13.12234 -13.00199 -12.64896 -12.50027 -12.41547 -12.21325 -12.18273 -11.81341 -11.76436 -11.32428 -10.91810 -10.76852 -10.75483 -10.50606 -10.05818 -9.35913 -8.82668 -4.99059 -0.26066 0.39522 1.27105 1.35338 1.52638 1.86113 1.93824 2.03112 2.21775 2.93924 3.17938 3.45429 3.52974 3.60278 3.67130 3.73163 3.75002 3.85654 3.97441 4.09519 4.11324 4.15710 4.24765 4.30813 4.36469 4.39872 4.42435 4.51399 4.56119 4.61720 4.74972 4.80364 4.93527 4.98269 4.99602 5.05352 5.08726 5.19869 5.25466 5.30803 5.43461 5.44119 5.53920 5.60434 5.98174 6.34346 6.47379 6.51426 6.68761 7.26077 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.038 4.038 3 Si 0.684 3.316 4 C -0.206 4.206 5 C 0.074 3.926 6 N -0.584 5.584 7 C 0.082 3.918 8 C -0.057 4.057 9 C -0.121 4.121 10 C 0.564 3.436 11 O -0.537 6.537 12 N -0.723 5.723 13 C 0.143 3.857 14 H 0.092 0.908 15 C -0.127 4.127 16 C -0.149 4.149 17 C 0.103 3.897 18 H 0.056 0.944 19 O -0.568 6.568 20 C -0.110 4.110 21 C -0.124 4.124 22 C -0.114 4.114 23 C -0.072 4.072 24 C -0.063 4.063 25 H 0.374 0.626 26 H 0.115 0.885 27 H -0.256 1.256 28 H -0.260 1.260 29 H 0.176 0.824 30 H 0.422 0.578 31 H 0.136 0.864 32 H 0.401 0.599 33 H 0.066 0.934 34 H 0.072 0.928 35 H 0.069 0.931 36 H 0.074 0.926 37 H 0.380 0.620 38 H 0.077 0.923 39 H 0.074 0.926 40 H 0.078 0.922 41 H 0.072 0.928 42 H 0.126 0.874 43 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.132 2.376 -1.449 2.786 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.148 4.148 3 Si 0.585 3.415 4 C -0.214 4.214 5 C -0.055 4.055 6 N -0.186 5.186 7 C -0.025 4.025 8 C -0.078 4.078 9 C -0.126 4.126 10 C 0.352 3.648 11 O -0.415 6.415 12 N -0.374 5.374 13 C 0.039 3.961 14 H 0.110 0.890 15 C -0.166 4.166 16 C -0.188 4.188 17 C 0.044 3.956 18 H 0.074 0.926 19 O -0.374 6.374 20 C -0.148 4.148 21 C -0.162 4.162 22 C -0.133 4.133 23 C -0.090 4.090 24 C -0.068 4.068 25 H 0.221 0.779 26 H 0.133 0.867 27 H -0.181 1.181 28 H -0.185 1.185 29 H 0.193 0.807 30 H 0.260 0.740 31 H 0.154 0.846 32 H 0.236 0.764 33 H 0.085 0.915 34 H 0.091 0.909 35 H 0.087 0.913 36 H 0.093 0.907 37 H 0.227 0.773 38 H 0.095 0.905 39 H 0.093 0.907 40 H 0.097 0.903 41 H 0.090 0.910 42 H 0.144 0.856 43 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 0.974 2.837 -1.442 3.328 hybrid contribution -1.660 0.056 0.931 1.904 sum -0.686 2.892 -0.511 3.016 Atomic orbital electron populations 1.86609 1.18064 1.79928 1.49080 1.24291 0.83386 1.09901 0.97237 0.95161 0.91500 0.74289 0.80516 1.20667 1.10580 0.92090 0.98076 1.21820 0.99722 0.94492 0.89444 1.41723 1.54649 1.04032 1.18170 1.18083 1.03250 0.86291 0.94848 1.20080 0.99506 0.88078 1.00118 1.19436 1.04982 0.92337 0.95800 1.18161 0.77378 0.84579 0.84668 1.90795 1.44463 1.86158 1.20101 1.45953 1.64445 1.05952 1.21094 1.21053 0.99649 0.80191 0.95189 0.88968 1.21870 0.98121 0.96579 1.00039 1.22237 1.03230 0.94758 0.98562 1.21852 0.98166 0.81810 0.93779 0.92608 1.86517 1.50187 1.30927 1.69768 1.21409 0.98177 0.95569 0.99613 1.21780 1.03302 0.93823 0.97306 1.20686 1.00579 0.97342 0.94723 1.20206 0.98694 0.90460 0.99678 1.19167 1.01012 0.93030 0.93597 0.77886 0.86711 1.18056 1.18507 0.80706 0.74019 0.84642 0.76354 0.91505 0.90892 0.91275 0.90689 0.77315 0.90482 0.90702 0.90299 0.90959 0.85644 0.85153 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.51 12.88 -35.23 -0.45 -0.97 16 2 C -0.04 0.03 3.06 36.00 0.11 0.14 16 3 Si 0.68 -1.37 30.82 -169.99 -5.24 -6.61 16 4 C -0.21 0.02 5.57 -102.74 -0.57 -0.55 16 5 C 0.07 -0.13 10.43 -16.78 -0.17 -0.31 16 6 N -0.58 0.78 6.07 -10.69 -0.06 0.71 16 7 C 0.08 0.10 7.26 -84.00 -0.61 -0.51 16 8 C -0.06 -0.11 9.61 -39.02 -0.37 -0.49 16 9 C -0.12 -0.22 5.87 -104.95 -0.62 -0.84 16 10 C 0.56 1.59 7.72 -12.45 -0.10 1.50 16 11 O -0.54 -3.41 15.97 5.29 0.08 -3.33 16 12 N -0.72 0.07 5.03 -54.83 -0.28 -0.21 16 13 C 0.14 0.00 2.45 -67.93 -0.17 -0.16 16 14 H 0.09 0.19 7.58 -51.93 -0.39 -0.20 16 15 C -0.13 0.00 5.49 -26.73 -0.15 -0.15 16 16 C -0.15 0.06 5.54 -26.73 -0.15 -0.09 16 17 C 0.10 -0.03 3.47 -26.73 -0.09 -0.13 16 18 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 19 O -0.57 -0.56 13.32 -35.23 -0.47 -1.03 16 20 C -0.11 0.05 5.58 -26.71 -0.15 -0.10 16 21 C -0.12 0.22 5.39 -26.71 -0.14 0.07 16 22 C -0.11 -0.01 9.46 -39.57 -0.37 -0.38 16 23 C -0.07 -0.05 10.03 -39.69 -0.40 -0.45 16 24 C -0.06 -0.09 6.35 -105.05 -0.67 -0.76 16 25 H 0.37 -0.68 8.70 45.56 0.40 -0.28 16 26 H 0.12 -0.12 7.96 -51.93 -0.41 -0.53 16 27 H -0.26 -0.42 7.11 56.52 0.40 -0.02 16 28 H -0.26 0.18 7.00 56.52 0.40 0.58 16 29 H 0.18 -0.79 6.27 -52.49 -0.33 -1.12 16 30 H 0.42 -1.68 8.96 -40.82 -0.37 -2.05 16 31 H 0.14 0.25 7.62 -52.49 -0.40 -0.15 16 32 H 0.40 -1.05 6.59 -40.82 -0.27 -1.32 16 33 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 34 H 0.07 0.14 8.14 -51.93 -0.42 -0.28 16 35 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 36 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 37 H 0.38 -1.07 9.08 45.56 0.41 -0.65 16 38 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 39 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 40 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 41 H 0.07 -0.20 8.14 -51.93 -0.42 -0.63 16 42 H 0.13 -0.34 6.36 -52.49 -0.33 -0.68 16 43 H 0.13 -0.05 8.06 -52.49 -0.42 -0.48 16 LS Contribution 351.94 15.07 5.30 5.30 Total: 0.00 -9.53 351.94 -10.86 -20.39 By element: Atomic # 1 Polarization: -5.93 SS G_CDS: -5.13 Total: -11.05 kcal Atomic # 6 Polarization: 1.42 SS G_CDS: -4.62 Total: -3.20 kcal Atomic # 7 Polarization: 0.84 SS G_CDS: -0.34 Total: 0.50 kcal Atomic # 8 Polarization: -4.49 SS G_CDS: -0.84 Total: -5.33 kcal Atomic # 14 Polarization: -1.37 SS G_CDS: -5.24 Total: -6.61 kcal Total LS contribution 5.30 Total: 5.30 kcal Total: -9.53 -10.86 -20.39 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_12335838.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.036 kcal (2) G-P(sol) polarization free energy of solvation -9.527 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.563 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.861 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.388 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.425 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds