Wall clock time and date at job start Sat Mar 6 2021 14:59:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.34847 * 125.90273 * 2 1 4 4 C 1.40942 * 107.46883 * 180.22463 * 3 2 1 5 5 C 1.50704 * 126.26804 * 179.77101 * 4 3 2 6 6 O 1.42899 * 109.46855 * 254.99587 * 5 4 3 7 7 Si 1.86302 * 109.47004 * 14.99454 * 5 4 3 8 8 C 1.34858 * 107.46765 * 359.76822 * 4 3 2 9 9 C 1.50698 * 125.90063 * 179.97438 * 8 4 3 10 10 N 1.36565 * 108.19841 * 0.02562 * 8 4 3 11 11 C 1.40222 * 125.66952 * 179.97438 * 10 8 4 12 12 C 1.38545 * 119.99759 * 115.00016 * 11 10 8 13 13 C 1.39501 * 119.78748 * 179.97438 * 12 11 10 14 14 C 1.47859 * 120.11464 * 180.02562 * 13 12 11 15 15 O 1.21554 * 119.99893 * 359.97438 * 14 13 12 16 16 N 1.34773 * 120.00282 * 180.02562 * 14 13 12 17 17 C 1.46496 * 120.00354 * 179.97438 * 16 14 13 18 18 H 1.09002 * 109.47021 * 324.99874 * 17 16 14 19 19 C 1.53002 * 109.47313 * 84.99862 * 17 16 14 20 20 C 1.53001 * 109.46963 * 180.02562 * 19 17 16 21 21 C 1.53000 * 109.46886 * 299.99499 * 20 19 17 22 22 H 1.09002 * 109.47398 * 300.00496 * 21 20 19 23 23 O 1.42903 * 109.46726 * 180.02562 * 21 20 19 24 24 C 1.53002 * 109.47233 * 60.00670 * 21 20 19 25 25 C 1.52997 * 109.47194 * 204.99986 * 17 16 14 26 26 C 1.39577 * 119.77174 * 0.27291 * 13 12 11 27 27 C 1.38016 * 119.98434 * 359.47002 * 26 13 12 28 28 C 1.38217 * 120.21759 * 0.51380 * 27 26 13 29 29 H 1.09001 * 109.47387 * 270.17245 * 1 2 3 30 30 H 1.08999 * 109.47327 * 30.17303 * 1 2 3 31 31 H 1.09002 * 109.47208 * 150.17348 * 1 2 3 32 32 H 1.08001 * 126.26645 * 359.94713 * 3 2 1 33 33 H 1.08994 * 109.46813 * 134.99555 * 5 4 3 34 34 H 0.96706 * 113.99759 * 179.97438 * 6 5 4 35 35 H 1.48491 * 109.99966 * 178.68038 * 7 5 4 36 36 H 1.48494 * 110.00232 * 300.00117 * 7 5 4 37 37 H 1.08999 * 109.46826 * 270.02393 * 9 8 4 38 38 H 1.09006 * 109.47115 * 30.02144 * 9 8 4 39 39 H 1.08999 * 109.46753 * 150.02403 * 9 8 4 40 40 H 1.07997 * 120.10768 * 0.02562 * 12 11 10 41 41 H 0.97007 * 119.99952 * 359.97438 * 16 14 13 42 42 H 1.09000 * 109.46497 * 300.00287 * 19 17 16 43 43 H 1.09002 * 109.47067 * 60.00040 * 19 17 16 44 44 H 1.09001 * 109.46652 * 179.97438 * 20 19 17 45 45 H 1.08992 * 109.47514 * 59.99933 * 20 19 17 46 46 H 0.96696 * 114.00096 * 60.00466 * 23 21 20 47 47 H 1.09002 * 109.47075 * 59.99068 * 24 21 20 48 48 H 1.08996 * 109.47407 * 180.02562 * 24 21 20 49 49 H 1.09001 * 109.47375 * 59.99949 * 25 17 16 50 50 H 1.09002 * 109.47497 * 299.99590 * 25 17 16 51 51 H 1.07999 * 120.00776 * 179.70586 * 26 13 12 52 52 H 1.08009 * 119.88972 * 180.27375 * 27 26 13 53 53 H 1.08001 * 119.88542 * 179.74390 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2977 1.0923 0.0000 4 6 3.6348 0.6466 -0.0053 5 6 4.8648 1.5174 -0.0120 6 8 5.4493 1.5060 -1.3160 7 14 4.3932 3.2617 0.4419 8 6 3.6121 -0.7018 -0.0031 9 6 4.8177 -1.6059 -0.0076 10 7 2.3078 -1.1063 0.0028 11 6 1.8643 -2.4366 0.0061 12 6 1.1687 -2.9321 1.0970 13 6 0.7291 -4.2560 1.0954 14 6 -0.0144 -4.7922 2.2556 15 8 -0.2431 -4.0792 3.2131 16 7 -0.4376 -6.0718 2.2519 17 6 -1.1738 -6.6032 3.4016 18 1 -0.7875 -6.1571 4.3180 19 6 -2.6590 -6.2655 3.2566 20 6 -3.4277 -6.8199 4.4577 21 6 -3.2536 -8.3388 4.5175 22 1 -3.6399 -8.7853 3.6012 23 8 -3.9720 -8.8568 5.6390 24 6 -1.7684 -8.6766 4.6625 25 6 -0.9996 -8.1220 3.4609 26 6 0.9980 -5.0743 -0.0029 27 6 1.6871 -4.5694 -1.0869 28 6 2.1221 -3.2575 -1.0850 29 1 -0.3634 0.0031 1.0277 30 1 -0.3634 0.8884 -0.5165 31 1 -0.3634 -0.8915 -0.5111 32 1 1.9670 2.1204 -0.0008 33 1 5.5843 1.1354 0.7120 34 1 6.2469 2.0471 -1.3942 35 1 5.6020 4.1236 0.4699 36 1 3.4124 3.7940 -0.5377 37 1 5.1036 -1.8251 -1.0364 38 1 5.6448 -1.1112 0.5018 39 1 4.5768 -2.5352 0.5085 40 1 0.9667 -2.2953 1.9455 41 1 -0.2548 -6.6409 1.4879 42 1 -2.7830 -5.1834 3.2143 43 1 -3.0453 -6.7116 2.3401 44 1 -4.4857 -6.5789 4.3546 45 1 -3.0414 -6.3736 5.3739 46 1 -4.9222 -8.6793 5.6134 47 1 -1.3820 -8.2301 5.5788 48 1 -1.6443 -9.7587 4.7047 49 1 0.0585 -8.3627 3.5642 50 1 -1.3859 -8.5682 2.5445 51 1 0.6636 -6.1012 -0.0061 52 1 1.8905 -5.2027 -1.9379 53 1 2.6645 -2.8692 -1.9343 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_12335854.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:59:12 Heat of formation + Delta-G solvation = -46.151041 kcal Electronic energy + Delta-G solvation = -33625.605258 eV Core-core repulsion = 29236.012187 eV Total energy + Delta-G solvation = -4389.593071 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.193 amu Computer time = 1.55 seconds Orbital eigenvalues (eV) -42.91044 -41.50929 -40.07855 -39.18149 -37.79985 -37.04021 -34.94722 -34.14834 -33.75467 -32.38441 -31.88948 -30.68259 -30.17690 -29.27114 -27.26440 -25.34890 -24.73318 -23.90240 -23.64896 -23.00957 -21.81726 -21.24847 -20.88651 -20.04137 -18.71330 -18.46086 -18.21241 -17.71583 -17.41733 -17.32066 -16.61854 -16.38541 -16.05272 -15.84590 -15.61070 -15.51330 -15.33204 -15.01676 -14.94102 -14.79045 -14.74149 -14.24824 -14.21643 -14.14394 -13.80412 -13.69758 -13.53802 -13.38437 -13.29011 -13.22895 -13.21923 -13.01889 -12.91920 -12.59119 -12.47102 -12.44174 -12.42663 -12.19945 -11.91524 -11.76985 -11.32364 -11.19749 -10.79158 -10.46207 -10.34711 -10.30556 -10.09783 -9.55143 -8.86764 -4.86623 -0.44719 -0.05780 1.06609 1.38566 1.58555 1.63218 1.70661 1.72766 1.99113 2.02327 2.57667 3.24830 3.46864 3.57940 3.59887 3.66743 3.68506 3.69306 3.87898 3.92086 3.95910 4.01308 4.08475 4.10909 4.17450 4.20052 4.25013 4.27896 4.35447 4.38346 4.41889 4.44740 4.53256 4.61952 4.62625 4.64013 4.68143 4.71745 4.86569 4.92244 4.96067 4.98000 5.00025 5.00630 5.06364 5.08220 5.10729 5.13280 5.16523 5.22957 5.27932 5.32153 5.40889 5.53646 5.93156 6.10864 6.39302 6.44719 6.69645 6.86127 7.06490 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 C 0.014 3.986 3 C -0.201 4.201 4 C -0.169 4.169 5 C -0.045 4.045 6 O -0.558 6.558 7 Si 0.762 3.238 8 C 0.038 3.962 9 C -0.078 4.078 10 N -0.405 5.405 11 C 0.097 3.903 12 C -0.063 4.063 13 C -0.132 4.132 14 C 0.559 3.441 15 O -0.578 6.578 16 N -0.703 5.703 17 C 0.143 3.857 18 H 0.064 0.936 19 C -0.122 4.122 20 C -0.146 4.146 21 C 0.103 3.897 22 H 0.073 0.927 23 O -0.590 6.590 24 C -0.113 4.113 25 C -0.113 4.113 26 C -0.063 4.063 27 C -0.100 4.100 28 C -0.086 4.086 29 H 0.076 0.924 30 H 0.092 0.908 31 H 0.062 0.938 32 H 0.146 0.854 33 H 0.083 0.917 34 H 0.389 0.611 35 H -0.285 1.285 36 H -0.302 1.302 37 H 0.077 0.923 38 H 0.088 0.912 39 H 0.065 0.935 40 H 0.119 0.881 41 H 0.418 0.582 42 H 0.048 0.952 43 H 0.086 0.914 44 H 0.078 0.922 45 H 0.054 0.946 46 H 0.394 0.606 47 H 0.057 0.943 48 H 0.080 0.920 49 H 0.086 0.914 50 H 0.097 0.903 51 H 0.171 0.829 52 H 0.175 0.825 53 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.727 -6.919 -3.284 7.693 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.139 4.139 2 C -0.094 4.094 3 C -0.224 4.224 4 C -0.175 4.175 5 C -0.155 4.155 6 O -0.368 6.368 7 Si 0.668 3.332 8 C -0.071 4.071 9 C -0.135 4.135 10 N -0.080 5.080 11 C 0.007 3.993 12 C -0.083 4.083 13 C -0.136 4.136 14 C 0.347 3.653 15 O -0.458 6.458 16 N -0.355 5.355 17 C 0.039 3.961 18 H 0.082 0.918 19 C -0.160 4.160 20 C -0.184 4.184 21 C 0.045 3.955 22 H 0.091 0.909 23 O -0.399 6.399 24 C -0.151 4.151 25 C -0.150 4.150 26 C -0.081 4.081 27 C -0.118 4.118 28 C -0.105 4.105 29 H 0.094 0.906 30 H 0.111 0.889 31 H 0.081 0.919 32 H 0.164 0.836 33 H 0.101 0.899 34 H 0.239 0.761 35 H -0.211 1.211 36 H -0.230 1.230 37 H 0.095 0.905 38 H 0.106 0.894 39 H 0.084 0.916 40 H 0.137 0.863 41 H 0.256 0.744 42 H 0.067 0.933 43 H 0.105 0.895 44 H 0.097 0.903 45 H 0.073 0.927 46 H 0.244 0.756 47 H 0.076 0.924 48 H 0.098 0.902 49 H 0.104 0.896 50 H 0.115 0.885 51 H 0.189 0.811 52 H 0.192 0.808 53 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -0.922 -6.512 -2.778 7.140 hybrid contribution 0.348 0.633 -0.996 1.230 sum -0.574 -5.879 -3.774 7.010 Atomic orbital electron populations 1.20357 0.86673 1.03685 1.03185 1.20732 0.94430 0.84978 1.09251 1.20759 0.92233 0.98139 1.11308 1.18758 0.93774 0.92257 1.12715 1.24168 0.94533 1.09712 0.87038 1.86583 1.46725 1.72415 1.31045 0.93924 0.78570 0.72381 0.88315 1.20605 0.84587 0.94337 1.07587 1.20323 0.92792 0.97306 1.03094 1.41481 1.05578 1.03333 1.57654 1.17651 1.02183 0.83588 0.95832 1.21123 0.95568 0.95117 0.96463 1.19741 1.03250 0.94395 0.96198 1.18425 0.78373 0.82350 0.86200 1.90800 1.58670 1.59244 1.37081 1.45801 1.56500 1.11377 1.21850 1.21044 0.91406 0.94949 0.88702 0.91783 1.21803 0.94349 1.00624 0.99263 1.22190 1.01287 0.96544 0.98399 1.21917 0.92785 0.91844 0.88981 0.90896 1.86484 1.25720 1.80853 1.46797 1.21446 0.93074 1.02053 0.98532 1.21715 1.01897 0.91826 0.99609 1.21800 0.94787 1.00615 0.90913 1.21434 0.96581 0.94158 0.99635 1.21638 0.98072 0.94665 0.96119 0.90552 0.88923 0.91892 0.83614 0.89884 0.76107 1.21145 1.22968 0.90475 0.89355 0.91599 0.86333 0.74356 0.93271 0.89542 0.90313 0.92688 0.75650 0.92445 0.90155 0.89572 0.88489 0.81131 0.80787 0.84461 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.25 9.94 71.24 0.71 0.46 16 2 C 0.01 0.11 6.81 41.04 0.28 0.39 16 3 C -0.20 -1.71 9.27 22.15 0.21 -1.50 16 4 C -0.17 -1.40 5.39 -19.98 -0.11 -1.51 16 5 C -0.04 -0.19 2.59 71.24 0.18 -0.01 16 6 O -0.56 -3.28 12.86 -148.98 -1.92 -5.20 16 7 Si 0.76 2.26 30.84 68.60 2.12 4.37 16 8 C 0.04 0.28 6.81 41.04 0.28 0.56 16 9 C -0.08 -0.17 9.72 71.24 0.69 0.52 16 10 N -0.41 -2.85 2.79 -320.37 -0.89 -3.74 16 11 C 0.10 0.34 4.65 38.04 0.18 0.52 16 12 C -0.06 -0.29 9.28 22.65 0.21 -0.08 16 13 C -0.13 -0.05 5.87 -20.10 -0.12 -0.17 16 14 C 0.56 2.09 7.74 86.79 0.67 2.76 16 15 O -0.58 -7.77 16.01 -3.88 -0.06 -7.83 16 16 N -0.70 2.65 5.03 -445.41 -2.24 0.41 16 17 C 0.14 -0.28 2.45 44.99 0.11 -0.17 16 18 H 0.06 0.29 7.58 -2.39 -0.02 0.27 16 19 C -0.12 0.22 5.49 30.60 0.17 0.39 16 20 C -0.15 0.25 5.54 30.59 0.17 0.42 16 21 C 0.10 -0.27 3.47 30.60 0.11 -0.16 16 22 H 0.07 -0.42 8.14 -2.39 -0.02 -0.44 16 23 O -0.59 -0.47 13.32 -148.98 -1.98 -2.46 16 24 C -0.11 0.30 5.58 30.61 0.17 0.47 16 25 C -0.11 0.77 5.39 30.61 0.17 0.93 16 26 C -0.06 0.46 9.54 22.54 0.21 0.67 16 27 C -0.10 0.74 10.02 22.21 0.22 0.96 16 28 C -0.09 0.13 9.72 22.44 0.22 0.35 16 29 H 0.08 0.19 8.14 -2.39 -0.02 0.17 16 30 H 0.09 0.05 8.14 -2.39 -0.02 0.03 16 31 H 0.06 0.17 7.83 -2.39 -0.02 0.15 16 32 H 0.15 0.94 6.55 -2.91 -0.02 0.92 16 33 H 0.08 0.03 7.50 -2.39 -0.02 0.01 16 34 H 0.39 -0.98 8.74 -74.05 -0.65 -1.63 16 35 H -0.28 -1.63 7.11 99.48 0.71 -0.92 16 36 H -0.30 -3.15 7.06 99.48 0.70 -2.45 16 37 H 0.08 0.10 8.14 -2.39 -0.02 0.08 16 38 H 0.09 0.04 7.50 -2.38 -0.02 0.02 16 39 H 0.07 0.08 7.83 -2.39 -0.02 0.06 16 40 H 0.12 1.10 7.65 -2.91 -0.02 1.07 16 41 H 0.42 -4.75 6.63 -92.70 -0.61 -5.36 16 42 H 0.05 0.17 8.14 -2.39 -0.02 0.15 16 43 H 0.09 -0.48 8.14 -2.39 -0.02 -0.50 16 44 H 0.08 -0.29 8.14 -2.39 -0.02 -0.30 16 45 H 0.05 0.13 8.14 -2.39 -0.02 0.11 16 46 H 0.39 -2.69 9.08 -74.06 -0.67 -3.36 16 47 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 48 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 49 H 0.09 -0.67 8.14 -2.39 -0.02 -0.69 16 50 H 0.10 -1.08 8.14 -2.39 -0.02 -1.10 16 51 H 0.17 -2.61 6.40 -2.91 -0.02 -2.63 16 52 H 0.17 -2.39 8.06 -2.91 -0.02 -2.42 16 53 H 0.14 -0.29 8.06 -2.91 -0.02 -0.31 16 Total: 0.00 -26.68 427.40 -1.21 -27.89 By element: Atomic # 1 Polarization: -18.30 SS G_CDS: -0.96 Total: -19.26 kcal Atomic # 6 Polarization: 1.08 SS G_CDS: 4.73 Total: 5.81 kcal Atomic # 7 Polarization: -0.20 SS G_CDS: -3.13 Total: -3.33 kcal Atomic # 8 Polarization: -11.52 SS G_CDS: -3.96 Total: -15.49 kcal Atomic # 14 Polarization: 2.26 SS G_CDS: 2.12 Total: 4.37 kcal Total: -26.68 -1.21 -27.89 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_12335854.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -18.258 kcal (2) G-P(sol) polarization free energy of solvation -26.684 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.942 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.209 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.893 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.151 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.55 seconds