Wall clock time and date at job start Sat Mar 6 2021 14:59:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86300 * 109.47387 * 2 1 4 4 C 1.50705 * 109.47011 * 120.00043 * 2 1 3 5 5 C 1.38318 * 119.92105 * 244.97568 * 4 2 1 6 6 C 1.38462 * 120.27864 * 179.97438 * 5 4 2 7 7 Br 1.89102 * 119.93566 * 180.02562 * 6 5 4 8 8 C 1.38028 * 120.12857 * 359.72037 * 6 5 4 9 9 C 1.39585 * 119.83798 * 0.57780 * 8 6 5 10 10 C 1.47854 * 120.13888 * 179.69687 * 9 8 6 11 11 O 1.21549 * 120.00031 * 179.72633 * 10 9 8 12 12 N 1.34779 * 119.99760 * 359.72704 * 10 9 8 13 13 C 1.46500 * 119.99793 * 179.97438 * 12 10 9 14 14 H 1.09002 * 109.47092 * 34.99824 * 13 12 10 15 15 C 1.52997 * 109.47007 * 154.99772 * 13 12 10 16 16 C 1.52999 * 109.47317 * 179.97438 * 15 13 12 17 17 C 1.53005 * 109.47159 * 300.00546 * 16 15 13 18 18 H 1.09002 * 109.46935 * 299.99411 * 17 16 15 19 19 O 1.42906 * 109.47029 * 179.97438 * 17 16 15 20 20 C 1.52997 * 109.47452 * 59.99536 * 17 16 15 21 21 C 1.53000 * 109.47023 * 274.99565 * 13 12 10 22 22 C 1.37982 * 119.92019 * 64.99784 * 4 2 1 23 23 H 0.96700 * 113.99875 * 59.99616 * 1 2 3 24 24 H 1.09002 * 109.46864 * 239.99564 * 2 1 3 25 25 H 1.48507 * 109.99817 * 59.99842 * 3 2 1 26 26 H 1.48492 * 109.99919 * 181.31892 * 3 2 1 27 27 H 1.07995 * 119.85738 * 359.97438 * 5 4 2 28 28 H 1.08002 * 120.08233 * 180.27255 * 8 6 5 29 29 H 0.97004 * 119.99983 * 359.97438 * 12 10 9 30 30 H 1.08996 * 109.47853 * 300.00060 * 15 13 12 31 31 H 1.09002 * 109.47153 * 60.00089 * 15 13 12 32 32 H 1.09002 * 109.46716 * 60.00091 * 16 15 13 33 33 H 1.09000 * 109.47486 * 180.02562 * 16 15 13 34 34 H 0.96693 * 113.99867 * 180.02562 * 19 17 16 35 35 H 1.09002 * 109.46695 * 59.99734 * 20 17 16 36 36 H 1.08993 * 109.47194 * 179.97438 * 20 17 16 37 37 H 1.08992 * 109.47399 * 300.00063 * 21 13 12 38 38 H 1.09004 * 109.46724 * 60.00549 * 21 13 12 39 39 H 1.08011 * 120.06776 * 359.97438 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6394 -0.0104 2.1906 6 6 3.1039 -0.6556 3.3242 7 35 4.0703 0.3110 4.6310 8 6 2.8575 -2.0016 3.5053 9 6 2.1489 -2.7144 2.5367 10 6 1.8870 -4.1579 2.7208 11 8 1.2654 -4.7751 1.8781 12 7 2.3376 -4.7893 3.8230 13 6 2.0776 -6.2195 4.0056 14 1 2.1056 -6.7203 3.0379 15 6 3.1466 -6.8193 4.9213 16 6 2.8748 -8.3127 5.1126 17 6 1.4951 -8.5030 5.7462 18 1 1.4675 -8.0018 6.7138 19 8 1.2411 -9.8979 5.9243 20 6 0.4262 -7.9032 4.8305 21 6 0.6980 -6.4102 4.6390 22 6 1.6842 -2.0578 1.3964 23 1 -0.3933 0.4418 -0.7650 24 1 1.7923 -0.5139 -0.8900 25 1 1.5616 2.4679 1.2085 26 1 3.5346 1.7702 -0.0321 27 1 2.8308 1.0438 2.0554 28 1 3.2164 -2.5032 4.3920 29 1 2.8340 -4.2968 4.4953 30 1 4.1295 -6.6834 4.4702 31 1 3.1187 -6.3184 5.8890 32 1 2.9024 -8.8138 4.1450 33 1 3.6360 -8.7399 5.7653 34 1 0.3817 -10.0935 6.3220 35 1 0.4539 -8.4043 3.8629 36 1 -0.5566 -8.0392 5.2817 37 1 0.6701 -5.9094 5.6067 38 1 -0.0635 -5.9829 3.9866 39 1 1.1311 -2.6030 0.6458 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_12335870.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:59:28 Heat of formation + Delta-G solvation = -92.063718 kcal Electronic energy + Delta-G solvation = -23354.887257 eV Core-core repulsion = 19695.740068 eV Total energy + Delta-G solvation = -3659.147189 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.046 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -41.69126 -40.49616 -39.39333 -37.72536 -37.02949 -34.74692 -33.73412 -33.10890 -31.97919 -30.56437 -29.49781 -27.06662 -25.45838 -23.97612 -23.04090 -22.74170 -21.50379 -20.95657 -18.99272 -18.56878 -18.25826 -17.76407 -17.74406 -16.73006 -16.42953 -16.17556 -15.89174 -15.58807 -15.26960 -15.07001 -14.87851 -14.82851 -14.42332 -14.19339 -14.14326 -13.66654 -13.42515 -13.33476 -13.08208 -12.72779 -12.52461 -12.46582 -12.27422 -12.13440 -11.94253 -11.83838 -11.56225 -11.38355 -11.07747 -10.83014 -10.55123 -10.33643 -10.14116 -9.97257 -5.11320 -0.56504 -0.22715 0.32666 1.10695 1.48462 1.56629 1.81310 1.90827 2.44461 3.05946 3.11505 3.28727 3.49923 3.53631 3.60498 3.65839 3.80543 3.90728 3.91659 4.03276 4.04547 4.09847 4.18512 4.21522 4.30468 4.34024 4.39999 4.54536 4.66366 4.74231 4.84590 4.87748 4.92542 4.99798 5.01716 5.03953 5.15915 5.22434 5.30317 5.38841 6.30880 6.48564 6.65433 7.04880 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.072 4.072 3 Si 0.681 3.319 4 C -0.074 4.074 5 C -0.070 4.070 6 C -0.093 4.093 7 Br -0.032 7.032 8 C -0.054 4.054 9 C -0.127 4.127 10 C 0.564 3.436 11 O -0.524 6.524 12 N -0.722 5.722 13 C 0.143 3.857 14 H 0.094 0.906 15 C -0.125 4.125 16 C -0.110 4.110 17 C 0.103 3.897 18 H 0.056 0.944 19 O -0.568 6.568 20 C -0.149 4.149 21 C -0.128 4.128 22 C -0.014 4.014 23 H 0.386 0.614 24 H 0.082 0.918 25 H -0.246 1.246 26 H -0.250 1.250 27 H 0.134 0.866 28 H 0.140 0.860 29 H 0.400 0.600 30 H 0.079 0.921 31 H 0.072 0.928 32 H 0.075 0.925 33 H 0.077 0.923 34 H 0.380 0.620 35 H 0.075 0.925 36 H 0.070 0.930 37 H 0.067 0.933 38 H 0.073 0.927 39 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.306 2.516 -0.416 2.568 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.183 4.183 3 Si 0.582 3.418 4 C -0.075 4.075 5 C -0.090 4.090 6 C -0.173 4.173 7 Br 0.054 6.946 8 C -0.074 4.074 9 C -0.131 4.131 10 C 0.350 3.650 11 O -0.401 6.401 12 N -0.374 5.374 13 C 0.039 3.961 14 H 0.112 0.888 15 C -0.163 4.163 16 C -0.148 4.148 17 C 0.044 3.956 18 H 0.074 0.926 19 O -0.374 6.374 20 C -0.188 4.188 21 C -0.167 4.167 22 C -0.033 4.033 23 H 0.234 0.766 24 H 0.100 0.900 25 H -0.170 1.170 26 H -0.174 1.174 27 H 0.152 0.848 28 H 0.158 0.842 29 H 0.235 0.765 30 H 0.097 0.903 31 H 0.091 0.909 32 H 0.094 0.906 33 H 0.096 0.904 34 H 0.227 0.773 35 H 0.094 0.906 36 H 0.088 0.912 37 H 0.085 0.915 38 H 0.092 0.908 39 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 1.405 2.659 0.191 3.013 hybrid contribution -0.501 -0.325 0.541 0.806 sum 0.904 2.333 0.732 2.607 Atomic orbital electron populations 1.86494 1.16639 1.81929 1.49917 1.24663 0.86255 1.10572 0.96821 0.95032 0.81096 0.77962 0.87729 1.19326 0.98762 0.93863 0.95506 1.21100 0.96224 0.99538 0.92101 1.21588 1.04105 0.95191 0.96393 1.96834 1.72313 1.73722 1.51777 1.21272 0.95595 0.92190 0.98379 1.19975 1.02594 0.93882 0.96644 1.18061 0.79017 0.86228 0.81663 1.90821 1.39649 1.66971 1.42656 1.45981 1.57790 1.10823 1.22785 1.21102 0.94600 0.79912 1.00460 0.88765 1.21777 0.98820 0.95710 0.99949 1.21400 0.95947 0.95125 1.02289 1.21852 0.94808 0.81731 0.97229 0.92591 1.86518 1.41484 1.23837 1.85518 1.22227 0.99264 0.95704 1.01588 1.21863 0.97146 0.96247 1.01398 1.21288 0.93235 0.93006 0.95798 0.76555 0.89997 1.17048 1.17444 0.84837 0.84214 0.76466 0.90279 0.90931 0.90646 0.90414 0.77267 0.90634 0.91166 0.91464 0.90801 0.83226 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.22 12.81 -35.23 -0.45 -0.23 16 2 C -0.07 0.06 2.79 36.01 0.10 0.16 16 3 Si 0.68 -1.20 29.84 -169.99 -5.07 -6.27 16 4 C -0.07 -0.11 5.38 -104.68 -0.56 -0.68 16 5 C -0.07 -0.12 8.41 -39.47 -0.33 -0.45 16 6 C -0.09 -0.11 6.22 -39.58 -0.25 -0.35 16 7 Br -0.03 -0.03 33.69 -68.01 -2.29 -2.32 16 8 C -0.05 0.00 9.28 -39.16 -0.36 -0.37 16 9 C -0.13 -0.20 5.87 -104.97 -0.62 -0.81 16 10 C 0.56 1.32 7.74 -12.32 -0.10 1.23 16 11 O -0.52 -3.06 16.01 5.32 0.09 -2.98 16 12 N -0.72 0.38 5.03 -54.75 -0.28 0.11 16 13 C 0.14 -0.06 2.46 -67.93 -0.17 -0.23 16 14 H 0.09 0.15 7.58 -51.93 -0.39 -0.25 16 15 C -0.12 0.26 5.39 -26.73 -0.14 0.12 16 16 C -0.11 0.08 5.57 -26.73 -0.15 -0.07 16 17 C 0.10 -0.06 3.47 -26.73 -0.09 -0.15 16 18 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 19 O -0.57 -0.43 13.32 -35.23 -0.47 -0.90 16 20 C -0.15 0.10 5.54 -26.76 -0.15 -0.05 16 21 C -0.13 0.04 5.49 -26.75 -0.15 -0.10 16 22 C -0.01 -0.03 9.23 -39.19 -0.36 -0.39 16 23 H 0.39 -2.11 8.74 45.56 0.40 -1.71 16 24 H 0.08 -0.20 7.96 -51.93 -0.41 -0.62 16 25 H -0.25 -0.30 7.05 56.52 0.40 0.09 16 26 H -0.25 -0.14 7.11 56.52 0.40 0.27 16 27 H 0.13 0.17 4.85 -52.49 -0.25 -0.08 16 28 H 0.14 -0.37 6.41 -52.49 -0.34 -0.70 16 29 H 0.40 -1.21 6.64 -40.82 -0.27 -1.48 16 30 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 31 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 32 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 33 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 34 H 0.38 -1.15 9.08 45.56 0.41 -0.73 16 35 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 36 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 37 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 38 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 39 H 0.15 0.35 7.65 -52.48 -0.40 -0.05 16 LS Contribution 339.86 15.07 5.12 5.12 Total: 0.00 -8.29 339.86 -10.94 -19.23 By element: Atomic # 1 Polarization: -5.36 SS G_CDS: -4.26 Total: -9.62 kcal Atomic # 6 Polarization: 1.18 SS G_CDS: -3.32 Total: -2.14 kcal Atomic # 7 Polarization: 0.38 SS G_CDS: -0.28 Total: 0.11 kcal Atomic # 8 Polarization: -3.28 SS G_CDS: -0.84 Total: -4.11 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.07 Total: -6.27 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -2.29 Total: -2.32 kcal Total LS contribution 5.12 Total: 5.12 kcal Total: -8.29 -10.94 -19.23 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_12335870.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.832 kcal (2) G-P(sol) polarization free energy of solvation -8.290 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.122 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.942 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.231 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.064 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds