Wall clock time and date at job start Sat Mar 6 2021 14:59:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86300 * 109.47387 * 2 1 4 4 C 1.50705 * 109.47011 * 120.00043 * 2 1 3 5 5 C 1.38318 * 119.92105 * 244.97568 * 4 2 1 6 6 C 1.38462 * 120.27864 * 179.97438 * 5 4 2 7 7 Br 1.89102 * 119.93566 * 180.02562 * 6 5 4 8 8 C 1.38028 * 120.12857 * 359.72037 * 6 5 4 9 9 C 1.39585 * 119.83798 * 0.57780 * 8 6 5 10 10 C 1.47854 * 120.13888 * 179.69687 * 9 8 6 11 11 O 1.21549 * 120.00031 * 179.72633 * 10 9 8 12 12 N 1.34779 * 119.99760 * 359.72704 * 10 9 8 13 13 C 1.46500 * 119.99793 * 179.97438 * 12 10 9 14 14 H 1.09002 * 109.47092 * 34.99824 * 13 12 10 15 15 C 1.52997 * 109.47007 * 154.99772 * 13 12 10 16 16 C 1.52999 * 109.47317 * 179.97438 * 15 13 12 17 17 C 1.53005 * 109.47159 * 300.00546 * 16 15 13 18 18 H 1.09002 * 109.46935 * 299.99411 * 17 16 15 19 19 O 1.42906 * 109.47029 * 179.97438 * 17 16 15 20 20 C 1.52997 * 109.47452 * 59.99536 * 17 16 15 21 21 C 1.53000 * 109.47023 * 274.99565 * 13 12 10 22 22 C 1.37982 * 119.92019 * 64.99784 * 4 2 1 23 23 H 0.96700 * 113.99875 * 59.99616 * 1 2 3 24 24 H 1.09002 * 109.46864 * 239.99564 * 2 1 3 25 25 H 1.48507 * 109.99817 * 59.99842 * 3 2 1 26 26 H 1.48492 * 109.99919 * 181.31892 * 3 2 1 27 27 H 1.07995 * 119.85738 * 359.97438 * 5 4 2 28 28 H 1.08002 * 120.08233 * 180.27255 * 8 6 5 29 29 H 0.97004 * 119.99983 * 359.97438 * 12 10 9 30 30 H 1.08996 * 109.47853 * 300.00060 * 15 13 12 31 31 H 1.09002 * 109.47153 * 60.00089 * 15 13 12 32 32 H 1.09002 * 109.46716 * 60.00091 * 16 15 13 33 33 H 1.09000 * 109.47486 * 180.02562 * 16 15 13 34 34 H 0.96693 * 113.99867 * 180.02562 * 19 17 16 35 35 H 1.09002 * 109.46695 * 59.99734 * 20 17 16 36 36 H 1.08993 * 109.47194 * 179.97438 * 20 17 16 37 37 H 1.08992 * 109.47399 * 300.00063 * 21 13 12 38 38 H 1.09004 * 109.46724 * 60.00549 * 21 13 12 39 39 H 1.08011 * 120.06776 * 359.97438 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6394 -0.0104 2.1906 6 6 3.1039 -0.6556 3.3242 7 35 4.0703 0.3110 4.6310 8 6 2.8575 -2.0016 3.5053 9 6 2.1489 -2.7144 2.5367 10 6 1.8870 -4.1579 2.7208 11 8 1.2654 -4.7751 1.8781 12 7 2.3376 -4.7893 3.8230 13 6 2.0776 -6.2195 4.0056 14 1 2.1056 -6.7203 3.0379 15 6 3.1466 -6.8193 4.9213 16 6 2.8748 -8.3127 5.1126 17 6 1.4951 -8.5030 5.7462 18 1 1.4675 -8.0018 6.7138 19 8 1.2411 -9.8979 5.9243 20 6 0.4262 -7.9032 4.8305 21 6 0.6980 -6.4102 4.6390 22 6 1.6842 -2.0578 1.3964 23 1 -0.3933 0.4418 -0.7650 24 1 1.7923 -0.5139 -0.8900 25 1 1.5616 2.4679 1.2085 26 1 3.5346 1.7702 -0.0321 27 1 2.8308 1.0438 2.0554 28 1 3.2164 -2.5032 4.3920 29 1 2.8340 -4.2968 4.4953 30 1 4.1295 -6.6834 4.4702 31 1 3.1187 -6.3184 5.8890 32 1 2.9024 -8.8138 4.1450 33 1 3.6360 -8.7399 5.7653 34 1 0.3817 -10.0935 6.3220 35 1 0.4539 -8.4043 3.8629 36 1 -0.5566 -8.0392 5.2817 37 1 0.6701 -5.9094 5.6067 38 1 -0.0635 -5.9829 3.9866 39 1 1.1311 -2.6030 0.6458 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_12335870.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:59:27 Heat of formation + Delta-G solvation = -93.397130 kcal Electronic energy + Delta-G solvation = -23354.945078 eV Core-core repulsion = 19695.740068 eV Total energy + Delta-G solvation = -3659.205010 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.046 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -41.79847 -40.51870 -39.46226 -37.67035 -37.07937 -34.83184 -33.80616 -33.15717 -31.92272 -30.63815 -29.50516 -27.05477 -25.54526 -23.92494 -23.03851 -22.80002 -21.57871 -20.95467 -19.04101 -18.48806 -18.23280 -17.85937 -17.80231 -16.74192 -16.50318 -16.27539 -15.91858 -15.53890 -15.29347 -15.11691 -14.93449 -14.84470 -14.44990 -14.23996 -14.17000 -13.66332 -13.39272 -13.29332 -13.05385 -12.80461 -12.51917 -12.48577 -12.22832 -12.19033 -11.97905 -11.80025 -11.64422 -11.35007 -11.24398 -10.81448 -10.56714 -10.36591 -10.17798 -10.04060 -5.00139 -0.67665 -0.29531 0.24803 1.20169 1.39510 1.60673 1.83511 1.89747 2.33810 3.08493 3.17886 3.29475 3.53435 3.59427 3.62556 3.66567 3.74680 3.87377 3.96945 4.04026 4.06281 4.17253 4.19318 4.25582 4.35306 4.39345 4.44600 4.57010 4.61710 4.79342 4.83587 4.88050 4.96108 4.97731 5.05644 5.08085 5.19765 5.20952 5.25718 5.37912 6.28650 6.84155 6.84814 6.95538 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.563 6.563 2 C -0.082 4.082 3 Si 0.770 3.230 4 C -0.084 4.084 5 C -0.082 4.082 6 C -0.100 4.100 7 Br -0.027 7.027 8 C -0.044 4.044 9 C -0.132 4.132 10 C 0.563 3.437 11 O -0.567 6.567 12 N -0.706 5.706 13 C 0.144 3.856 14 H 0.069 0.931 15 C -0.114 4.114 16 C -0.112 4.112 17 C 0.103 3.897 18 H 0.071 0.929 19 O -0.589 6.589 20 C -0.145 4.145 21 C -0.123 4.123 22 C -0.026 4.026 23 H 0.407 0.593 24 H 0.100 0.900 25 H -0.288 1.288 26 H -0.281 1.281 27 H 0.133 0.867 28 H 0.168 0.832 29 H 0.415 0.585 30 H 0.086 0.914 31 H 0.093 0.907 32 H 0.059 0.941 33 H 0.080 0.920 34 H 0.394 0.606 35 H 0.057 0.943 36 H 0.079 0.921 37 H 0.083 0.917 38 H 0.050 0.950 39 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.806 2.921 0.600 3.089 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.192 4.192 3 Si 0.674 3.326 4 C -0.085 4.085 5 C -0.102 4.102 6 C -0.180 4.180 7 Br 0.058 6.942 8 C -0.064 4.064 9 C -0.137 4.137 10 C 0.350 3.650 11 O -0.447 6.447 12 N -0.357 5.357 13 C 0.039 3.961 14 H 0.088 0.912 15 C -0.152 4.152 16 C -0.150 4.150 17 C 0.044 3.956 18 H 0.089 0.911 19 O -0.397 6.397 20 C -0.183 4.183 21 C -0.162 4.162 22 C -0.046 4.046 23 H 0.259 0.741 24 H 0.118 0.882 25 H -0.216 1.216 26 H -0.207 1.207 27 H 0.151 0.849 28 H 0.186 0.814 29 H 0.253 0.747 30 H 0.104 0.896 31 H 0.112 0.888 32 H 0.078 0.922 33 H 0.098 0.902 34 H 0.244 0.756 35 H 0.076 0.924 36 H 0.097 0.903 37 H 0.102 0.898 38 H 0.069 0.931 39 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 1.897 3.059 1.213 3.798 hybrid contribution -0.666 -0.456 0.261 0.849 sum 1.231 2.603 1.474 3.235 Atomic orbital electron populations 1.86444 1.16760 1.82550 1.51570 1.24867 0.86355 1.11411 0.96567 0.94068 0.77877 0.75318 0.85291 1.19610 0.98668 0.93798 0.96398 1.21233 0.96654 0.99673 0.92607 1.21712 1.04191 0.95663 0.96395 1.96834 1.72165 1.73774 1.51404 1.21483 0.94487 0.91761 0.98698 1.19966 1.03142 0.93510 0.97037 1.18222 0.78534 0.86475 0.81756 1.90800 1.41783 1.67847 1.44282 1.45869 1.56832 1.10841 1.22201 1.21087 0.95481 0.79703 0.99793 0.91234 1.21714 0.98251 0.94762 1.00476 1.21425 0.96147 0.95886 1.01528 1.21909 0.94561 0.81335 0.97748 0.91070 1.86482 1.42796 1.24631 1.85840 1.22173 0.99993 0.95263 1.00870 1.21802 0.96337 0.96452 1.01563 1.21327 0.93720 0.93404 0.96114 0.74147 0.88177 1.21554 1.20724 0.84936 0.81416 0.74696 0.89570 0.88802 0.92188 0.90165 0.75621 0.92414 0.90254 0.89825 0.93114 0.84142 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.35 12.81 -148.98 -1.91 -1.56 16 2 C -0.08 0.11 2.79 71.24 0.20 0.31 16 3 Si 0.77 -2.50 29.84 68.60 2.05 -0.45 16 4 C -0.08 -0.32 5.38 -19.90 -0.11 -0.43 16 5 C -0.08 -0.32 8.41 22.34 0.19 -0.14 16 6 C -0.10 -0.23 6.22 22.27 0.14 -0.09 16 7 Br -0.03 -0.03 33.69 -20.37 -0.69 -0.72 16 8 C -0.04 0.01 9.28 22.55 0.21 0.22 16 9 C -0.13 -0.49 5.87 -20.09 -0.12 -0.61 16 10 C 0.56 3.17 7.74 86.79 0.67 3.85 16 11 O -0.57 -7.85 16.01 -3.87 -0.06 -7.91 16 12 N -0.71 0.88 5.03 -445.40 -2.24 -1.36 16 13 C 0.14 -0.07 2.46 44.99 0.11 0.04 16 14 H 0.07 0.34 7.58 -2.39 -0.02 0.33 16 15 C -0.11 0.59 5.39 30.59 0.16 0.75 16 16 C -0.11 0.19 5.57 30.60 0.17 0.36 16 17 C 0.10 -0.17 3.47 30.60 0.11 -0.06 16 18 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 19 O -0.59 -0.83 13.32 -148.98 -1.98 -2.82 16 20 C -0.14 0.14 5.54 30.58 0.17 0.31 16 21 C -0.12 0.05 5.49 30.58 0.17 0.22 16 22 C -0.03 -0.14 9.23 22.53 0.21 0.06 16 23 H 0.41 -4.58 8.74 -74.06 -0.65 -5.23 16 24 H 0.10 -0.52 7.96 -2.39 -0.02 -0.54 16 25 H -0.29 -1.05 7.05 99.48 0.70 -0.35 16 26 H -0.28 -0.47 7.11 99.48 0.71 0.24 16 27 H 0.13 0.46 4.85 -2.91 -0.01 0.45 16 28 H 0.17 -1.17 6.41 -2.91 -0.02 -1.19 16 29 H 0.41 -3.13 6.64 -92.71 -0.62 -3.75 16 30 H 0.09 -0.52 8.14 -2.39 -0.02 -0.54 16 31 H 0.09 -0.83 8.14 -2.39 -0.02 -0.85 16 32 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 33 H 0.08 -0.16 8.14 -2.39 -0.02 -0.17 16 34 H 0.39 -2.47 9.08 -74.06 -0.67 -3.14 16 35 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 36 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 37 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 38 H 0.05 0.24 8.14 -2.39 -0.02 0.22 16 39 H 0.14 0.96 7.65 -2.90 -0.02 0.94 16 Total: 0.00 -20.96 339.86 -3.35 -24.31 By element: Atomic # 1 Polarization: -13.49 SS G_CDS: -0.79 Total: -14.28 kcal Atomic # 6 Polarization: 2.51 SS G_CDS: 2.28 Total: 4.79 kcal Atomic # 7 Polarization: 0.88 SS G_CDS: -2.24 Total: -1.36 kcal Atomic # 8 Polarization: -8.33 SS G_CDS: -3.95 Total: -12.29 kcal Atomic # 14 Polarization: -2.50 SS G_CDS: 2.05 Total: -0.45 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -0.69 Total: -0.72 kcal Total: -20.96 -3.35 -24.31 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_12335870.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.091 kcal (2) G-P(sol) polarization free energy of solvation -20.957 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.048 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.350 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.306 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.397 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds