Wall clock time and date at job start Sat Mar 6 2021 14:59:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.53003 * 109.47107 * 2 1 4 4 C 1.52994 * 109.47113 * 174.15637 * 3 2 1 5 5 C 1.53004 * 109.46859 * 294.15638 * 3 2 1 6 6 C 1.50701 * 109.47286 * 67.07750 * 5 3 2 7 7 O 1.21276 * 120.00152 * 233.69219 * 6 5 3 8 8 N 1.34777 * 119.99828 * 53.69383 * 6 5 3 9 9 C 1.46501 * 120.00057 * 174.79499 * 8 6 5 10 10 H 1.08998 * 109.46941 * 325.00202 * 9 8 6 11 11 C 1.52999 * 109.47125 * 84.99886 * 9 8 6 12 12 C 1.52996 * 109.47398 * 180.02562 * 11 9 8 13 13 C 1.52998 * 109.47091 * 299.99887 * 12 11 9 14 14 H 1.08998 * 109.47467 * 299.99939 * 13 12 11 15 15 O 1.42902 * 109.47178 * 179.97438 * 13 12 11 16 16 C 1.53009 * 109.47117 * 60.00104 * 13 12 11 17 17 C 1.52998 * 109.47339 * 204.99757 * 9 8 6 18 18 N 1.46495 * 109.47190 * 307.07537 * 5 3 2 19 19 C 1.36345 * 125.63645 * 67.29116 * 18 5 3 20 20 C 1.34855 * 108.21986 * 179.97438 * 19 18 5 21 21 C 1.40895 * 107.41439 * 359.77126 * 20 19 18 22 22 C 1.34849 * 107.41785 * 0.37664 * 21 20 19 23 23 C 1.50705 * 125.88969 * 179.88481 * 22 21 20 24 24 O 1.42901 * 109.47080 * 209.69013 * 23 22 21 25 25 Si 1.86295 * 109.47151 * 329.69584 * 23 22 21 26 26 H 1.09001 * 109.46658 * 193.63726 * 1 2 3 27 27 H 1.08997 * 109.46879 * 313.63713 * 1 2 3 28 28 H 1.08996 * 109.47106 * 73.63958 * 1 2 3 29 29 H 1.09000 * 109.47153 * 240.00246 * 2 1 3 30 30 H 1.09002 * 109.47110 * 120.00098 * 2 1 3 31 31 H 1.08997 * 109.47150 * 54.15213 * 3 2 1 32 32 H 1.09007 * 109.47040 * 186.29541 * 4 3 2 33 33 H 1.09001 * 109.47565 * 306.29431 * 4 3 2 34 34 H 1.09006 * 109.47305 * 66.29559 * 4 3 2 35 35 H 1.09003 * 109.47050 * 187.07416 * 5 3 2 36 36 H 0.96997 * 120.00081 * 354.79366 * 8 6 5 37 37 H 1.09003 * 109.47557 * 300.00155 * 11 9 8 38 38 H 1.09005 * 109.47422 * 59.99847 * 11 9 8 39 39 H 1.08996 * 109.47720 * 179.97438 * 12 11 9 40 40 H 1.09000 * 109.47355 * 59.99885 * 12 11 9 41 41 H 0.96706 * 113.99784 * 60.00504 * 15 13 12 42 42 H 1.08988 * 109.47367 * 179.97438 * 16 13 12 43 43 H 1.08998 * 109.47087 * 59.99603 * 16 13 12 44 44 H 1.08998 * 109.47467 * 300.00122 * 17 9 8 45 45 H 1.09005 * 109.46875 * 60.00416 * 17 9 8 46 46 H 1.07997 * 125.88844 * 0.02562 * 19 18 5 47 47 H 1.07997 * 126.28887 * 179.97438 * 20 19 18 48 48 H 1.07998 * 126.29024 * 180.24207 * 21 20 19 49 49 H 1.09004 * 109.46357 * 89.69347 * 23 22 21 50 50 H 0.96695 * 113.99614 * 60.00166 * 24 23 22 51 51 H 1.48495 * 110.00369 * 58.67575 * 25 23 22 52 52 H 1.48497 * 109.99885 * 179.97438 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 3.5629 1.4450 0.1469 5 6 1.6535 2.1201 -1.3162 6 6 0.1557 2.2738 -1.3812 7 8 -0.4567 1.8476 -2.3372 8 7 -0.5031 2.8850 -0.3768 9 6 -1.9419 3.1365 -0.4906 10 1 -2.1898 3.3654 -1.5270 11 6 -2.7138 1.8931 -0.0443 12 6 -4.2164 2.1555 -0.1638 13 6 -4.5995 3.3400 0.7255 14 1 -4.3520 3.1113 1.7620 15 8 -6.0029 3.5854 0.6134 16 6 -3.8277 4.5835 0.2791 17 6 -2.3246 4.3209 0.3990 18 7 2.1093 1.2989 -2.4405 19 6 1.6268 0.0674 -2.7717 20 6 2.2926 -0.3672 -3.8610 21 6 3.2163 0.6348 -4.2183 22 6 3.0857 1.6400 -3.3289 23 6 3.8778 2.9220 -3.3220 24 8 4.0024 3.3977 -1.9802 25 14 5.5724 2.6088 -4.0298 26 1 -0.3633 -0.9987 0.2423 27 1 -0.3633 0.7092 0.7437 28 1 -0.3633 0.2895 -0.9860 29 1 1.8934 -0.5138 -0.8900 30 1 1.8934 -0.5139 0.8900 31 1 1.5938 1.9857 0.8330 32 1 3.9154 2.4704 0.2592 33 1 3.8442 0.8658 1.0264 34 1 4.0143 1.0008 -0.7404 35 1 2.1222 3.1027 -1.3704 36 1 -0.0247 3.1584 0.4215 37 1 -2.4412 1.0492 -0.6781 38 1 -2.4659 1.6640 0.9921 39 1 -4.7663 1.2696 0.1537 40 1 -4.4640 2.3842 -1.2003 41 1 -6.5554 2.8380 0.8802 42 1 -4.1009 5.4275 0.9123 43 1 -4.0752 4.8122 -0.7574 44 1 -2.0767 4.0919 1.4355 45 1 -1.7747 5.2067 0.0810 46 1 0.8457 -0.4673 -2.2519 47 1 2.1427 -1.3088 -4.3682 48 1 3.9042 0.6028 -5.0502 49 1 3.3641 3.6697 -3.9263 50 1 4.4510 2.7819 -1.3848 51 1 5.4556 2.0836 -5.4138 52 1 6.3633 3.8656 -4.0291 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_12360566.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:59:31 Heat of formation + Delta-G solvation = -59.997238 kcal Electronic energy + Delta-G solvation = -32621.578295 eV Core-core repulsion = 28588.751750 eV Total energy + Delta-G solvation = -4032.826545 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.209 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -43.01396 -41.14226 -39.68613 -37.97298 -37.55781 -37.01881 -34.48844 -33.10163 -32.00659 -31.39687 -30.83793 -29.93034 -27.67611 -26.00789 -24.83219 -23.93281 -23.39773 -22.25926 -21.62451 -21.36239 -21.07819 -20.33659 -19.02131 -18.28402 -18.02886 -17.50713 -17.25374 -16.84525 -16.23917 -16.19873 -15.65028 -15.62082 -15.29936 -15.27521 -14.99090 -14.68870 -14.52189 -14.44370 -14.36088 -14.20128 -13.86677 -13.75990 -13.46224 -13.37663 -13.25378 -13.12897 -13.11480 -12.90943 -12.63711 -12.48092 -12.28651 -12.17819 -12.05829 -11.87383 -11.85899 -11.70811 -11.63236 -11.36323 -10.98895 -10.82780 -10.58770 -10.14503 -9.41298 -8.72282 -4.99372 1.12762 1.31127 1.45545 1.67173 1.82793 2.03529 2.18995 2.30397 3.09369 3.18604 3.32036 3.43187 3.50594 3.55062 3.58639 3.77369 3.85890 3.90637 4.00738 4.07580 4.13823 4.16370 4.19376 4.27123 4.28570 4.31443 4.34580 4.45929 4.50296 4.52855 4.54143 4.68240 4.71933 4.75162 4.82201 4.84268 4.86016 4.90907 4.97182 4.99748 5.00761 5.02234 5.10494 5.14889 5.20957 5.29340 5.37042 5.47167 5.52542 6.12067 6.24721 6.33072 6.45172 6.53077 6.63219 7.05674 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C -0.144 4.144 3 C -0.095 4.095 4 C -0.159 4.159 5 C 0.105 3.895 6 C 0.517 3.483 7 O -0.519 6.519 8 N -0.725 5.725 9 C 0.146 3.854 10 H 0.090 0.910 11 C -0.127 4.127 12 C -0.150 4.150 13 C 0.103 3.897 14 H 0.056 0.944 15 O -0.568 6.568 16 C -0.110 4.110 17 C -0.124 4.124 18 N -0.410 5.410 19 C 0.019 3.981 20 C -0.204 4.204 21 C -0.188 4.188 22 C -0.021 4.021 23 C -0.046 4.046 24 O -0.552 6.552 25 Si 0.716 3.284 26 H 0.058 0.942 27 H 0.060 0.940 28 H 0.074 0.926 29 H 0.088 0.912 30 H 0.071 0.929 31 H 0.088 0.912 32 H 0.067 0.933 33 H 0.070 0.930 34 H 0.065 0.935 35 H 0.149 0.851 36 H 0.400 0.600 37 H 0.075 0.925 38 H 0.066 0.934 39 H 0.069 0.931 40 H 0.074 0.926 41 H 0.380 0.620 42 H 0.077 0.923 43 H 0.074 0.926 44 H 0.072 0.928 45 H 0.077 0.923 46 H 0.163 0.837 47 H 0.136 0.864 48 H 0.137 0.863 49 H 0.114 0.886 50 H 0.377 0.623 51 H -0.253 1.253 52 H -0.254 1.254 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.457 -1.081 6.482 7.016 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C -0.181 4.181 3 C -0.114 4.114 4 C -0.215 4.215 5 C -0.002 4.002 6 C 0.302 3.698 7 O -0.394 6.394 8 N -0.377 5.377 9 C 0.041 3.959 10 H 0.108 0.892 11 C -0.165 4.165 12 C -0.189 4.189 13 C 0.044 3.956 14 H 0.074 0.926 15 O -0.374 6.374 16 C -0.148 4.148 17 C -0.162 4.162 18 N -0.087 5.087 19 C -0.111 4.111 20 C -0.228 4.228 21 C -0.213 4.213 22 C -0.131 4.131 23 C -0.156 4.156 24 O -0.361 6.361 25 Si 0.616 3.384 26 H 0.077 0.923 27 H 0.079 0.921 28 H 0.093 0.907 29 H 0.106 0.894 30 H 0.089 0.911 31 H 0.106 0.894 32 H 0.086 0.914 33 H 0.089 0.911 34 H 0.084 0.916 35 H 0.166 0.834 36 H 0.235 0.765 37 H 0.094 0.906 38 H 0.085 0.915 39 H 0.088 0.912 40 H 0.092 0.908 41 H 0.227 0.773 42 H 0.095 0.905 43 H 0.092 0.908 44 H 0.091 0.909 45 H 0.096 0.904 46 H 0.181 0.819 47 H 0.154 0.846 48 H 0.155 0.845 49 H 0.132 0.868 50 H 0.228 0.772 51 H -0.177 1.177 52 H -0.179 1.179 Dipole moment (debyes) X Y Z Total from point charges 2.397 0.130 4.950 5.501 hybrid contribution -0.844 -0.378 0.527 1.065 sum 1.552 -0.248 5.477 5.698 Atomic orbital electron populations 1.22424 0.95733 1.02528 1.03411 1.22058 0.96233 0.95611 1.04192 1.21530 0.97928 0.97509 0.94432 1.22005 0.93940 1.02516 1.03086 1.21767 0.92694 0.98605 0.87106 1.20454 0.89487 0.77230 0.82592 1.90801 1.68621 1.47099 1.32926 1.46064 1.09596 1.61760 1.20297 1.21050 0.78933 0.94622 1.01253 0.89228 1.21907 0.94244 0.98416 1.01964 1.22243 0.96162 0.98675 1.01781 1.21845 0.81315 0.94672 0.97721 0.92625 1.86523 1.16713 1.43715 1.90414 1.21409 0.92816 0.97371 1.03197 1.21780 0.96235 0.97978 1.00187 1.43392 1.28475 1.14482 1.22320 1.21843 1.02289 0.87108 0.99842 1.20830 1.01456 1.01187 0.99367 1.20654 1.04458 0.94815 1.01376 1.20670 0.97626 0.98862 0.95990 1.24824 1.08831 0.93463 0.88494 1.86444 1.81439 1.48436 1.19753 0.94168 0.77114 0.84031 0.83093 0.92334 0.92105 0.90727 0.89394 0.91066 0.89394 0.91383 0.91127 0.91613 0.83390 0.76461 0.90637 0.91521 0.91247 0.90761 0.77279 0.90459 0.90757 0.90935 0.90385 0.81942 0.84620 0.84506 0.86839 0.77165 1.17679 1.17912 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.19 7.09 37.16 0.26 0.46 16 2 C -0.14 0.26 4.85 -26.73 -0.13 0.13 16 3 C -0.09 0.28 2.32 -90.62 -0.21 0.06 16 4 C -0.16 0.61 7.62 37.15 0.28 0.89 16 5 C 0.10 -0.06 2.22 -69.08 -0.15 -0.21 16 6 C 0.52 0.44 4.18 -10.98 -0.05 0.40 16 7 O -0.52 -2.57 13.70 5.56 0.08 -2.49 16 8 N -0.72 1.38 3.85 -53.81 -0.21 1.17 16 9 C 0.15 -0.17 2.41 -67.93 -0.16 -0.33 16 10 H 0.09 0.13 7.66 -51.93 -0.40 -0.27 16 11 C -0.13 0.15 4.65 -26.73 -0.12 0.02 16 12 C -0.15 0.15 5.54 -26.73 -0.15 0.00 16 13 C 0.10 -0.09 3.47 -26.73 -0.09 -0.18 16 14 H 0.06 -0.09 8.14 -51.93 -0.42 -0.52 16 15 O -0.57 -0.36 13.32 -35.23 -0.47 -0.83 16 16 C -0.11 0.10 5.57 -26.70 -0.15 -0.05 16 17 C -0.12 0.31 5.39 -26.71 -0.14 0.17 16 18 N -0.41 -0.57 1.88 -106.70 -0.20 -0.77 16 19 C 0.02 0.05 6.88 -16.75 -0.12 -0.07 16 20 C -0.20 -0.60 10.86 -39.78 -0.43 -1.03 16 21 C -0.19 -0.48 9.43 -39.78 -0.38 -0.85 16 22 C -0.02 -0.04 5.88 -81.79 -0.48 -0.52 16 23 C -0.05 -0.01 2.93 36.01 0.11 0.09 16 24 O -0.55 0.47 9.65 -35.23 -0.34 0.13 16 25 Si 0.72 -0.55 31.32 -169.99 -5.32 -5.88 16 26 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 27 H 0.06 -0.11 6.31 -51.93 -0.33 -0.44 16 28 H 0.07 0.08 3.03 -51.93 -0.16 -0.08 16 29 H 0.09 -0.04 4.46 -51.93 -0.23 -0.27 16 30 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 31 H 0.09 -0.40 6.85 -51.93 -0.36 -0.75 16 32 H 0.07 -0.33 6.71 -51.92 -0.35 -0.68 16 33 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 34 H 0.06 -0.19 6.75 -51.93 -0.35 -0.54 16 35 H 0.15 -0.10 5.47 -51.93 -0.28 -0.38 16 36 H 0.40 -1.74 7.42 -40.82 -0.30 -2.05 16 37 H 0.07 0.06 7.08 -51.93 -0.37 -0.31 16 38 H 0.07 -0.14 7.93 -51.93 -0.41 -0.55 16 39 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 40 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 41 H 0.38 -1.19 9.08 45.56 0.41 -0.78 16 42 H 0.08 -0.06 8.14 -51.94 -0.42 -0.48 16 43 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 44 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 45 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 46 H 0.16 0.34 4.99 -52.49 -0.26 0.07 16 47 H 0.14 0.24 8.06 -52.49 -0.42 -0.18 16 48 H 0.14 0.24 6.69 -52.49 -0.35 -0.12 16 49 H 0.11 0.12 7.96 -51.93 -0.41 -0.30 16 50 H 0.38 -1.28 4.73 45.56 0.22 -1.07 16 51 H -0.25 -0.43 6.78 56.52 0.38 -0.05 16 52 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 LS Contribution 371.53 15.07 5.60 5.60 Total: 0.00 -7.52 371.53 -10.78 -18.30 By element: Atomic # 1 Polarization: -6.42 SS G_CDS: -7.80 Total: -14.22 kcal Atomic # 6 Polarization: 1.10 SS G_CDS: -2.11 Total: -1.01 kcal Atomic # 7 Polarization: 0.81 SS G_CDS: -0.41 Total: 0.40 kcal Atomic # 8 Polarization: -2.46 SS G_CDS: -0.73 Total: -3.19 kcal Atomic # 14 Polarization: -0.55 SS G_CDS: -5.32 Total: -5.88 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -7.52 -10.78 -18.30 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_12360566.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.695 kcal (2) G-P(sol) polarization free energy of solvation -7.524 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.220 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.778 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.302 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.997 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds