Wall clock time and date at job start Sat Mar 6 2021 14:59:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86301 * 109.47130 * 2 1 4 4 C 1.50700 * 109.47191 * 239.99871 * 2 1 3 5 5 C 1.38405 * 119.82541 * 300.00327 * 4 2 1 6 6 C 1.37884 * 120.16905 * 180.02562 * 5 4 2 7 7 C 1.39840 * 119.82784 * 359.97082 * 6 5 4 8 8 C 1.47207 * 120.17013 * 179.97438 * 7 6 5 9 9 C 1.34814 * 119.99878 * 180.02562 * 8 7 6 10 10 C 1.46427 * 119.99845 * 179.97438 * 9 8 7 11 11 O 1.21695 * 119.99891 * 0.02562 * 10 9 8 12 12 N 1.34774 * 119.99822 * 179.97438 * 10 9 8 13 13 C 1.46507 * 119.99765 * 180.02562 * 12 10 9 14 14 H 1.08996 * 109.47141 * 324.99711 * 13 12 10 15 15 C 1.53005 * 109.47108 * 85.00181 * 13 12 10 16 16 C 1.52992 * 109.46929 * 179.97438 * 15 13 12 17 17 C 1.52995 * 109.47164 * 299.99590 * 16 15 13 18 18 H 1.08995 * 109.47831 * 300.00188 * 17 16 15 19 19 O 1.42902 * 109.47217 * 180.02562 * 17 16 15 20 20 C 1.53004 * 109.47235 * 60.00374 * 17 16 15 21 21 C 1.52995 * 109.47022 * 204.99793 * 13 12 10 22 22 C 1.39835 * 119.65825 * 0.25748 * 7 6 5 23 23 C 1.37892 * 119.82853 * 359.53575 * 22 7 6 24 24 H 0.96700 * 113.99950 * 300.00638 * 1 2 3 25 25 H 1.09003 * 109.46911 * 119.99550 * 2 1 3 26 26 H 1.48504 * 109.99706 * 178.68181 * 3 2 1 27 27 H 1.48495 * 110.00016 * 299.99542 * 3 2 1 28 28 H 1.07996 * 119.91130 * 359.97438 * 5 4 2 29 29 H 1.08005 * 120.08916 * 179.97438 * 6 5 4 30 30 H 1.07995 * 120.00062 * 0.27238 * 8 7 6 31 31 H 1.07999 * 120.00033 * 359.97438 * 9 8 7 32 32 H 0.96999 * 120.00050 * 0.02562 * 12 10 9 33 33 H 1.09004 * 109.46660 * 300.00060 * 15 13 12 34 34 H 1.08997 * 109.46769 * 59.99647 * 15 13 12 35 35 H 1.09006 * 109.47090 * 179.97438 * 16 15 13 36 36 H 1.09003 * 109.47531 * 59.99785 * 16 15 13 37 37 H 0.96699 * 113.99970 * 60.00103 * 19 17 16 38 38 H 1.08995 * 109.47254 * 179.97438 * 20 17 16 39 39 H 1.09003 * 109.47007 * 60.00081 * 20 17 16 40 40 H 1.09002 * 109.47791 * 300.00465 * 21 13 12 41 41 H 1.09006 * 109.46952 * 59.99987 * 21 13 12 42 42 H 1.08008 * 120.08490 * 179.71892 * 22 7 6 43 43 H 1.07995 * 119.91294 * 180.18695 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 1.5947 -2.0355 -1.4459 6 6 2.0509 -2.6926 -2.5690 7 6 2.8550 -2.0164 -3.4919 8 6 3.3467 -2.7108 -4.6932 9 6 4.1222 -2.0557 -5.5804 10 6 4.6116 -2.7466 -6.7751 11 8 4.3180 -3.9118 -6.9673 12 7 5.3865 -2.0916 -7.6622 13 6 5.8757 -2.7826 -8.8578 14 1 6.0818 -3.8253 -8.6161 15 6 4.8136 -2.7142 -9.9570 16 6 5.3248 -3.4353 -11.2057 17 6 6.6084 -2.7612 -11.6943 18 1 6.4021 -1.7185 -11.9358 19 8 7.0856 -3.4343 -12.8611 20 6 7.6706 -2.8296 -10.5952 21 6 7.1595 -2.1091 -9.3467 22 6 3.1947 -0.6791 -3.2646 23 6 2.7272 -0.0345 -2.1389 24 1 -0.3933 0.4418 0.7650 25 1 1.7923 -0.5138 0.8901 26 1 3.5346 1.7702 0.0321 27 1 1.5616 2.4678 -1.2085 28 1 0.9739 -2.5564 -0.7320 29 1 1.7877 -3.7267 -2.7356 30 1 3.0828 -3.7437 -4.8659 31 1 4.3824 -1.0215 -5.4099 32 1 5.6202 -1.1627 -7.5091 33 1 3.8989 -3.1940 -9.6087 34 1 4.6075 -1.6715 -10.1987 35 1 4.5679 -3.3869 -11.9887 36 1 5.5312 -4.4780 -10.9644 37 1 6.4620 -3.4303 -13.6002 38 1 8.5852 -2.3497 -10.9435 39 1 7.8770 -3.8723 -10.3539 40 1 6.9536 -1.0663 -9.5884 41 1 7.9162 -2.1578 -8.5636 42 1 3.8191 -0.1516 -3.9706 43 1 2.9862 0.9992 -1.9635 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_12360594.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:59:35 Heat of formation + Delta-G solvation = -83.420871 kcal Electronic energy + Delta-G solvation = -23615.313088 eV Core-core repulsion = 20012.594924 eV Total energy + Delta-G solvation = -3602.718164 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.151 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -41.16027 -40.61903 -39.55449 -37.81161 -37.00039 -35.15973 -34.42131 -32.34743 -31.94875 -31.47052 -29.49529 -27.08146 -24.41577 -24.06115 -23.92993 -22.82839 -21.76260 -21.27372 -20.28127 -18.68338 -18.45489 -18.23887 -17.71122 -17.18726 -16.74328 -16.33440 -16.17643 -15.77178 -15.56803 -15.32106 -15.22425 -14.90304 -14.72055 -14.45461 -14.18162 -14.00213 -13.82960 -13.63457 -13.38784 -13.30228 -13.03878 -12.99695 -12.48925 -12.34531 -12.24205 -12.05361 -11.95804 -11.80095 -11.36493 -11.34510 -10.94296 -10.78249 -10.40575 -10.08849 -10.07274 -9.29479 -5.04691 -0.59647 0.28533 0.86716 1.19873 1.56213 1.88772 2.12673 2.27646 2.72141 3.15349 3.26904 3.49368 3.54939 3.63765 3.65199 3.73340 3.81523 3.95146 4.05888 4.08703 4.12479 4.14210 4.20533 4.22380 4.27464 4.34206 4.38245 4.44782 4.58733 4.72556 4.77701 4.86760 4.90041 4.95807 5.00579 5.02681 5.05044 5.07122 5.19270 5.28401 5.30575 5.38843 5.48969 5.53370 5.78756 6.49694 6.53015 6.66778 7.24673 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.075 4.075 3 Si 0.684 3.316 4 C -0.063 4.063 5 C -0.091 4.091 6 C -0.090 4.090 7 C -0.074 4.074 8 C -0.014 4.014 9 C -0.216 4.216 10 C 0.549 3.451 11 O -0.542 6.542 12 N -0.724 5.724 13 C 0.143 3.857 14 H 0.092 0.908 15 C -0.127 4.127 16 C -0.150 4.150 17 C 0.103 3.897 18 H 0.056 0.944 19 O -0.568 6.568 20 C -0.110 4.110 21 C -0.124 4.124 22 C -0.094 4.094 23 C -0.126 4.126 24 H 0.384 0.616 25 H 0.077 0.923 26 H -0.255 1.255 27 H -0.250 1.250 28 H 0.133 0.867 29 H 0.134 0.866 30 H 0.139 0.861 31 H 0.129 0.871 32 H 0.401 0.599 33 H 0.072 0.928 34 H 0.066 0.934 35 H 0.069 0.931 36 H 0.074 0.926 37 H 0.380 0.620 38 H 0.076 0.924 39 H 0.074 0.926 40 H 0.071 0.929 41 H 0.077 0.923 42 H 0.131 0.869 43 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.424 4.968 3.415 6.043 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.186 4.186 3 Si 0.585 3.415 4 C -0.063 4.063 5 C -0.109 4.109 6 C -0.108 4.108 7 C -0.074 4.074 8 C -0.034 4.034 9 C -0.236 4.236 10 C 0.338 3.662 11 O -0.420 6.420 12 N -0.374 5.374 13 C 0.038 3.962 14 H 0.110 0.890 15 C -0.166 4.166 16 C -0.188 4.188 17 C 0.044 3.956 18 H 0.074 0.926 19 O -0.374 6.374 20 C -0.148 4.148 21 C -0.162 4.162 22 C -0.112 4.112 23 C -0.144 4.144 24 H 0.231 0.769 25 H 0.095 0.905 26 H -0.180 1.180 27 H -0.175 1.175 28 H 0.151 0.849 29 H 0.152 0.848 30 H 0.157 0.843 31 H 0.147 0.853 32 H 0.235 0.765 33 H 0.091 0.909 34 H 0.084 0.916 35 H 0.088 0.912 36 H 0.093 0.907 37 H 0.227 0.773 38 H 0.095 0.905 39 H 0.093 0.907 40 H 0.090 0.910 41 H 0.096 0.904 42 H 0.149 0.851 43 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges 0.481 4.324 2.669 5.104 hybrid contribution -0.382 0.119 -0.438 0.594 sum 0.099 4.443 2.230 4.972 Atomic orbital electron populations 1.86488 1.17029 1.81846 1.49775 1.24728 0.85885 1.10487 0.97458 0.95247 0.80637 0.78028 0.87562 1.19543 0.97225 0.94489 0.95032 1.20979 0.98611 0.93713 0.97593 1.21480 0.95886 1.00158 0.93301 1.19052 0.99336 0.93817 0.95180 1.22404 0.91166 0.99616 0.90165 1.22900 1.03628 1.01067 0.96047 1.18322 0.78263 0.86447 0.83148 1.90836 1.57561 1.16629 1.77002 1.45942 1.52574 1.15694 1.23215 1.21044 0.93018 0.98073 0.84031 0.89026 1.21863 0.99090 1.01124 0.94491 1.22236 0.97584 1.01144 0.97846 1.21847 0.93125 0.94836 0.85773 0.92630 1.86517 1.47093 1.79460 1.24315 1.21394 0.98210 1.02172 0.93022 1.21756 0.96600 1.00009 0.97802 1.21297 0.99035 0.93906 0.96930 1.20805 0.99597 0.99057 0.94920 0.76864 0.90507 1.17955 1.17481 0.84922 0.84789 0.84320 0.85309 0.76463 0.90897 0.91570 0.91243 0.90681 0.77293 0.90483 0.90704 0.91017 0.90386 0.85092 0.86156 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.12 12.74 -35.23 -0.45 -0.33 16 2 C -0.08 0.04 2.81 36.01 0.10 0.14 16 3 Si 0.68 -1.03 29.77 -169.99 -5.06 -6.09 16 4 C -0.06 -0.11 5.43 -104.50 -0.57 -0.68 16 5 C -0.09 -0.13 9.59 -39.65 -0.38 -0.51 16 6 C -0.09 -0.10 9.80 -39.11 -0.38 -0.48 16 7 C -0.07 -0.10 5.87 -105.06 -0.62 -0.72 16 8 C -0.01 -0.02 9.46 -37.15 -0.35 -0.37 16 9 C -0.22 -0.11 9.41 -37.50 -0.35 -0.46 16 10 C 0.55 1.33 7.71 -12.97 -0.10 1.23 16 11 O -0.54 -3.45 15.89 5.19 0.08 -3.36 16 12 N -0.72 0.22 5.07 -55.19 -0.28 -0.06 16 13 C 0.14 0.02 2.46 -67.93 -0.17 -0.15 16 14 H 0.09 0.21 7.58 -51.93 -0.39 -0.18 16 15 C -0.13 -0.02 5.49 -26.73 -0.15 -0.16 16 16 C -0.15 0.03 5.54 -26.74 -0.15 -0.11 16 17 C 0.10 -0.02 3.47 -26.73 -0.09 -0.11 16 18 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 19 O -0.57 -0.63 13.32 -35.23 -0.47 -1.10 16 20 C -0.11 0.03 5.57 -26.76 -0.15 -0.11 16 21 C -0.12 0.20 5.39 -26.76 -0.14 0.06 16 22 C -0.09 -0.10 9.41 -39.11 -0.37 -0.46 16 23 C -0.13 -0.22 8.65 -39.65 -0.34 -0.56 16 24 H 0.38 -2.01 8.74 45.56 0.40 -1.61 16 25 H 0.08 -0.16 7.96 -51.93 -0.41 -0.58 16 26 H -0.25 -0.21 7.11 56.52 0.40 0.20 16 27 H -0.25 -0.43 7.11 56.52 0.40 -0.02 16 28 H 0.13 0.03 8.06 -52.49 -0.42 -0.39 16 29 H 0.13 -0.10 8.06 -52.48 -0.42 -0.53 16 30 H 0.14 0.23 7.52 -52.49 -0.39 -0.17 16 31 H 0.13 -0.27 6.07 -52.49 -0.32 -0.59 16 32 H 0.40 -1.24 8.58 -40.82 -0.35 -1.59 16 33 H 0.07 0.16 8.14 -51.93 -0.42 -0.27 16 34 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 35 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 36 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 37 H 0.38 -1.03 9.08 45.56 0.41 -0.62 16 38 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 39 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 40 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 41 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 42 H 0.13 -0.17 6.17 -52.48 -0.32 -0.50 16 43 H 0.12 0.12 4.85 -52.49 -0.25 -0.13 16 LS Contribution 353.02 15.07 5.32 5.32 Total: 0.00 -9.32 353.02 -10.55 -19.87 By element: Atomic # 1 Polarization: -5.28 SS G_CDS: -5.49 Total: -10.77 kcal Atomic # 6 Polarization: 0.73 SS G_CDS: -4.21 Total: -3.48 kcal Atomic # 7 Polarization: 0.22 SS G_CDS: -0.28 Total: -0.06 kcal Atomic # 8 Polarization: -3.96 SS G_CDS: -0.84 Total: -4.79 kcal Atomic # 14 Polarization: -1.03 SS G_CDS: -5.06 Total: -6.09 kcal Total LS contribution 5.32 Total: 5.32 kcal Total: -9.32 -10.55 -19.87 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_12360594.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.551 kcal (2) G-P(sol) polarization free energy of solvation -9.319 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.870 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.551 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.870 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.421 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds