Wall clock time and date at job start Sat Mar 6 2021 14:59:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.46881 * 2 1 4 4 C 1.50702 * 109.47267 * 120.00038 * 2 1 3 5 5 C 1.38608 * 119.84083 * 195.02262 * 4 2 1 6 6 F 1.35098 * 119.92229 * 359.95685 * 5 4 2 7 7 C 1.38115 * 120.16275 * 179.69920 * 5 4 2 8 8 C 1.39615 * 119.85183 * 0.55362 * 7 5 4 9 9 C 1.47694 * 120.15736 * 179.72084 * 8 7 5 10 10 O 1.21563 * 120.00074 * 179.72836 * 9 8 7 11 11 N 1.34777 * 119.99643 * 359.72530 * 9 8 7 12 12 C 1.46499 * 119.99665 * 179.72383 * 11 9 8 13 13 H 1.08999 * 109.47480 * 35.27807 * 12 11 9 14 14 C 1.52999 * 109.47493 * 155.28120 * 12 11 9 15 15 C 1.52992 * 109.47689 * 180.02562 * 14 12 11 16 16 C 1.52999 * 109.46921 * 299.99639 * 15 14 12 17 17 H 1.09000 * 109.47077 * 299.99701 * 16 15 14 18 18 O 1.42902 * 109.47123 * 179.97438 * 16 15 14 19 19 C 1.53002 * 109.47179 * 60.00100 * 16 15 14 20 20 C 1.53005 * 109.46995 * 299.99723 * 19 16 15 21 21 C 1.39846 * 119.68870 * 359.45057 * 8 7 5 22 22 F 1.35094 * 120.08619 * 180.24939 * 21 8 7 23 23 C 1.38221 * 119.83901 * 15.00327 * 4 2 1 24 24 H 0.96698 * 114.00500 * 299.99640 * 1 2 3 25 25 H 1.09006 * 109.47163 * 240.00316 * 2 1 3 26 26 H 1.48496 * 110.00154 * 178.68116 * 3 2 1 27 27 H 1.48500 * 110.00234 * 300.00033 * 3 2 1 28 28 H 1.08003 * 120.07303 * 180.30528 * 7 5 4 29 29 H 0.97001 * 120.00485 * 0.02562 * 11 9 8 30 30 H 1.09009 * 109.46506 * 300.00089 * 14 12 11 31 31 H 1.08999 * 109.47014 * 59.99401 * 14 12 11 32 32 H 1.08999 * 109.47499 * 59.99555 * 15 14 12 33 33 H 1.09006 * 109.47246 * 179.97438 * 15 14 12 34 34 H 0.96699 * 113.99864 * 179.97438 * 18 16 15 35 35 H 1.08999 * 109.47056 * 60.00198 * 19 16 15 36 36 H 1.09000 * 109.46999 * 179.97438 * 19 16 15 37 37 H 1.09000 * 109.47108 * 300.00306 * 20 19 16 38 38 H 1.08995 * 109.46860 * 179.97438 * 20 19 16 39 39 H 1.08002 * 119.93505 * 0.02562 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 3.2561 -0.5721 1.6142 6 9 4.0923 0.1978 0.8840 7 6 3.7220 -1.2152 2.7442 8 6 2.8583 -2.0155 3.4943 9 6 3.3509 -2.7112 4.7004 10 8 2.5952 -3.4034 5.3542 11 7 4.6385 -2.5787 5.0760 12 6 5.1257 -3.2639 6.2757 13 1 4.6267 -4.2283 6.3713 14 6 6.6360 -3.4803 6.1616 15 6 7.1448 -4.1965 7.4142 16 6 6.8437 -3.3426 8.6476 17 1 7.3428 -2.3782 8.5525 18 8 7.3183 -4.0118 9.8176 19 6 5.3334 -3.1262 8.7618 20 6 4.8246 -2.4100 7.5091 21 6 1.5229 -2.1507 3.1015 22 9 0.6789 -2.9191 3.8243 23 6 1.0688 -1.4965 1.9711 24 1 -0.3934 0.4416 0.7650 25 1 1.7924 -0.5138 -0.8901 26 1 3.5345 1.7704 0.0321 27 1 1.5614 2.4680 -1.2085 28 1 4.7533 -1.1025 3.0446 29 1 5.2415 -2.0261 4.5545 30 1 6.8505 -4.0890 5.2831 31 1 7.1350 -2.5159 6.0661 32 1 6.6457 -5.1608 7.5094 33 1 8.2207 -4.3510 7.3327 34 1 7.1612 -3.5266 10.6392 35 1 4.8343 -4.0906 8.8569 36 1 5.1189 -2.5183 9.6407 37 1 5.3237 -1.4456 7.4140 38 1 3.7486 -2.2563 7.5903 39 1 0.0378 -1.5999 1.6664 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_12360598.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:59:37 Heat of formation + Delta-G solvation = -174.578932 kcal Electronic energy + Delta-G solvation = -26357.761424 eV Core-core repulsion = 22095.946158 eV Total energy + Delta-G solvation = -4261.815265 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 314.116 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -50.43564 -50.09469 -41.54333 -40.28950 -39.46386 -37.67590 -37.03836 -34.74888 -32.99575 -31.89315 -31.43074 -29.60238 -27.70623 -24.27695 -24.20155 -23.87773 -22.87860 -21.74548 -21.13440 -19.59236 -19.08157 -18.56889 -18.21799 -17.89905 -17.53620 -17.28772 -17.04130 -16.74549 -16.27152 -16.03119 -15.91172 -15.74270 -15.66041 -15.50777 -15.10716 -14.76676 -14.52574 -14.22273 -14.17633 -13.70753 -13.38441 -13.28090 -13.25049 -13.03902 -12.95877 -12.49493 -12.47579 -12.19691 -11.77419 -11.57314 -11.31505 -11.15202 -10.99869 -10.78450 -10.29727 -10.16793 -9.71579 -4.99583 -0.77719 -0.27523 1.14605 1.47778 1.65667 1.82939 1.98959 2.29166 2.80442 2.84409 3.13126 3.20376 3.26624 3.51461 3.52600 3.60362 3.69024 3.82234 3.99521 4.09013 4.19253 4.21315 4.27492 4.33273 4.37478 4.40385 4.41995 4.61141 4.65654 4.75238 4.78853 4.86802 4.93530 5.00437 5.08111 5.10603 5.22256 5.26262 5.39220 5.42510 6.32038 6.63663 6.86785 7.00287 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.073 4.073 3 Si 0.764 3.236 4 C -0.083 4.083 5 C 0.072 3.928 6 F -0.121 7.121 7 C -0.068 4.068 8 C -0.158 4.158 9 C 0.558 3.442 10 O -0.564 6.564 11 N -0.703 5.703 12 C 0.143 3.857 13 H 0.065 0.935 14 C -0.113 4.113 15 C -0.113 4.113 16 C 0.103 3.897 17 H 0.074 0.926 18 O -0.590 6.590 19 C -0.145 4.145 20 C -0.122 4.122 21 C 0.138 3.862 22 F -0.128 7.128 23 C -0.116 4.116 24 H 0.400 0.600 25 H 0.128 0.872 26 H -0.252 1.252 27 H -0.304 1.304 28 H 0.182 0.818 29 H 0.417 0.583 30 H 0.085 0.915 31 H 0.097 0.903 32 H 0.057 0.943 33 H 0.079 0.921 34 H 0.394 0.606 35 H 0.054 0.946 36 H 0.079 0.921 37 H 0.087 0.913 38 H 0.050 0.950 39 H 0.174 0.826 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.505 5.960 0.149 6.915 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.181 4.181 3 Si 0.667 3.333 4 C -0.085 4.085 5 C 0.053 3.947 6 F -0.099 7.099 7 C -0.087 4.087 8 C -0.162 4.162 9 C 0.345 3.655 10 O -0.443 6.443 11 N -0.355 5.355 12 C 0.039 3.961 13 H 0.084 0.916 14 C -0.151 4.151 15 C -0.151 4.151 16 C 0.045 3.955 17 H 0.091 0.909 18 O -0.399 6.399 19 C -0.184 4.184 20 C -0.160 4.160 21 C 0.118 3.882 22 F -0.106 7.106 23 C -0.135 4.135 24 H 0.251 0.749 25 H 0.145 0.855 26 H -0.177 1.177 27 H -0.232 1.232 28 H 0.200 0.800 29 H 0.256 0.744 30 H 0.103 0.897 31 H 0.115 0.885 32 H 0.076 0.924 33 H 0.098 0.902 34 H 0.244 0.756 35 H 0.073 0.927 36 H 0.098 0.902 37 H 0.106 0.894 38 H 0.069 0.931 39 H 0.191 0.809 Dipole moment (debyes) X Y Z Total from point charges 3.735 5.286 -0.768 6.518 hybrid contribution -0.246 -0.316 0.044 0.403 sum 3.490 4.970 -0.724 6.116 Atomic orbital electron populations 1.86501 1.16289 1.81843 1.50949 1.25198 0.86051 1.10725 0.96172 0.94273 0.79077 0.73793 0.86112 1.20471 0.92129 0.97679 0.98236 1.17294 0.87963 0.96512 0.92980 1.91604 1.70929 1.71700 1.75707 1.21298 1.01511 0.93689 0.92186 1.19798 0.93543 1.04068 0.98827 1.18124 0.82852 0.80600 0.83938 1.90869 1.56685 1.40892 1.55852 1.45803 1.09927 1.51051 1.28742 1.21066 0.95524 0.95716 0.83771 0.91649 1.21708 0.92184 1.03008 0.98211 1.21431 1.02242 0.98827 0.92593 1.21917 0.92428 0.95635 0.85563 0.90856 1.86485 1.83676 1.51655 1.18047 1.22189 0.96669 1.01054 0.98472 1.21807 1.01008 0.99713 0.93515 1.17974 0.86981 0.92033 0.91247 1.91591 1.69913 1.72541 1.76595 1.20878 1.03066 0.96749 0.92800 0.74888 0.85532 1.17722 1.23207 0.80046 0.74447 0.89668 0.88493 0.92441 0.90201 0.75620 0.92693 0.90213 0.89437 0.93112 0.80853 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 2.42 11.63 -148.98 -1.73 0.69 16 2 C -0.07 0.32 2.96 71.24 0.21 0.53 16 3 Si 0.76 -3.47 30.81 68.60 2.11 -1.36 16 4 C -0.08 0.34 5.14 -19.78 -0.10 0.23 16 5 C 0.07 -0.29 6.65 22.33 0.15 -0.15 16 6 F -0.12 0.26 12.80 44.97 0.58 0.84 16 7 C -0.07 0.39 9.52 22.57 0.21 0.60 16 8 C -0.16 -0.06 5.88 -20.06 -0.12 -0.18 16 9 C 0.56 2.35 7.73 86.74 0.67 3.02 16 10 O -0.56 -7.89 15.00 -3.91 -0.06 -7.95 16 11 N -0.70 2.27 5.03 -445.55 -2.24 0.03 16 12 C 0.14 -0.23 2.45 44.99 0.11 -0.12 16 13 H 0.07 0.31 7.58 -2.39 -0.02 0.29 16 14 C -0.11 0.71 5.39 30.59 0.16 0.88 16 15 C -0.11 0.26 5.57 30.59 0.17 0.43 16 16 C 0.10 -0.25 3.47 30.59 0.11 -0.14 16 17 H 0.07 -0.41 8.14 -2.39 -0.02 -0.43 16 18 O -0.59 -0.56 13.32 -148.98 -1.98 -2.54 16 19 C -0.15 0.24 5.54 30.60 0.17 0.41 16 20 C -0.12 0.21 5.49 30.60 0.17 0.38 16 21 C 0.14 0.38 7.28 22.67 0.17 0.55 16 22 F -0.13 -1.22 15.55 44.97 0.70 -0.52 16 23 C -0.12 0.29 9.20 22.28 0.20 0.49 16 24 H 0.40 -5.10 8.42 -74.06 -0.62 -5.73 16 25 H 0.13 -0.47 7.96 -2.38 -0.02 -0.49 16 26 H -0.25 0.10 5.26 99.48 0.52 0.63 16 27 H -0.30 -1.07 7.11 99.48 0.71 -0.37 16 28 H 0.18 -2.33 6.40 -2.91 -0.02 -2.35 16 29 H 0.42 -4.42 6.63 -92.71 -0.62 -5.04 16 30 H 0.08 -0.60 8.14 -2.38 -0.02 -0.62 16 31 H 0.10 -1.02 8.14 -2.39 -0.02 -1.04 16 32 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 33 H 0.08 -0.20 8.14 -2.38 -0.02 -0.22 16 34 H 0.39 -2.67 9.08 -74.06 -0.67 -3.34 16 35 H 0.05 0.14 8.14 -2.39 -0.02 0.12 16 36 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 37 H 0.09 -0.49 8.14 -2.39 -0.02 -0.51 16 38 H 0.05 0.17 8.14 -2.39 -0.02 0.15 16 39 H 0.17 -0.88 7.06 -2.91 -0.02 -0.90 16 Total: 0.00 -22.69 325.21 -1.28 -23.97 By element: Atomic # 1 Polarization: -19.18 SS G_CDS: -0.93 Total: -20.11 kcal Atomic # 6 Polarization: 4.67 SS G_CDS: 2.28 Total: 6.96 kcal Atomic # 7 Polarization: 2.27 SS G_CDS: -2.24 Total: 0.03 kcal Atomic # 8 Polarization: -6.03 SS G_CDS: -3.78 Total: -9.80 kcal Atomic # 9 Polarization: -0.96 SS G_CDS: 1.27 Total: 0.32 kcal Atomic # 14 Polarization: -3.47 SS G_CDS: 2.11 Total: -1.36 kcal Total: -22.69 -1.28 -23.97 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_12360598.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -150.613 kcal (2) G-P(sol) polarization free energy of solvation -22.690 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -173.303 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.276 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.965 kcal (6) G-S(sol) free energy of system = (1) + (5) -174.579 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds