Wall clock time and date at job start Sat Mar 6 2021 14:59:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35652 * 117.00234 * 2 1 4 4 C 1.40133 * 120.15256 * 180.02562 * 3 2 1 5 5 C 1.47535 * 120.19100 * 0.02562 * 4 3 2 6 6 O 1.21588 * 120.00106 * 359.71818 * 5 4 3 7 7 N 1.34775 * 120.00391 * 179.72486 * 5 4 3 8 8 C 1.46500 * 120.00366 * 179.97438 * 7 5 4 9 9 H 1.09000 * 109.47175 * 34.99887 * 8 7 5 10 10 C 1.53006 * 109.46998 * 154.99756 * 8 7 5 11 11 C 1.52999 * 109.46626 * 179.97438 * 10 8 7 12 12 C 1.52997 * 109.47592 * 300.00035 * 11 10 8 13 13 H 1.09000 * 109.47140 * 300.00346 * 12 11 10 14 14 O 1.42896 * 109.47412 * 180.02562 * 12 11 10 15 15 C 1.52996 * 109.47165 * 60.00300 * 12 11 10 16 16 C 1.52997 * 109.47204 * 274.99782 * 8 7 5 17 17 C 1.39710 * 119.61982 * 179.72101 * 4 3 2 18 18 C 1.37786 * 119.90581 * 0.25380 * 17 4 3 19 19 C 1.50697 * 119.85231 * 179.97438 * 18 17 4 20 20 O 1.42899 * 109.47246 * 64.99708 * 19 18 17 21 21 Si 1.86293 * 109.47497 * 185.00128 * 19 18 17 22 22 C 1.38550 * 120.29888 * 359.97438 * 18 17 4 23 23 C 1.38051 * 120.39424 * 0.02562 * 22 18 17 24 24 H 1.09004 * 109.47431 * 180.02562 * 1 2 3 25 25 H 1.09007 * 109.46936 * 299.99478 * 1 2 3 26 26 H 1.08992 * 109.47670 * 59.99792 * 1 2 3 27 27 H 0.97001 * 119.99752 * 359.97438 * 7 5 4 28 28 H 1.08993 * 109.46955 * 300.00226 * 10 8 7 29 29 H 1.09000 * 109.47050 * 60.00054 * 10 8 7 30 30 H 1.09000 * 109.47160 * 60.00369 * 11 10 8 31 31 H 1.09002 * 109.46719 * 180.02562 * 11 10 8 32 32 H 0.96708 * 114.00101 * 59.99449 * 14 12 11 33 33 H 1.08992 * 109.47534 * 180.02562 * 15 12 11 34 34 H 1.08996 * 109.47134 * 59.99508 * 15 12 11 35 35 H 1.09000 * 109.47140 * 300.00127 * 16 8 7 36 36 H 1.09001 * 109.47230 * 59.99271 * 16 8 7 37 37 H 1.08001 * 120.04777 * 180.27397 * 17 4 3 38 38 H 1.09003 * 109.47045 * 305.00721 * 19 18 17 39 39 H 0.96707 * 113.99402 * 59.99848 * 20 19 18 40 40 H 1.48503 * 110.00337 * 179.97438 * 21 19 18 41 41 H 1.48498 * 110.00052 * 301.32232 * 21 19 18 42 42 H 1.07997 * 119.80070 * 180.02562 * 22 18 17 43 43 H 1.07996 * 119.96395 * 180.02562 * 23 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0448 1.2086 0.0000 4 6 3.4441 1.2857 -0.0005 5 6 4.2549 0.0531 -0.0017 6 8 3.7094 -1.0335 0.0030 7 7 5.6004 0.1316 -0.0078 8 6 6.4056 -1.0923 -0.0084 9 1 5.8994 -1.8600 -0.5937 10 6 7.7754 -0.8013 -0.6248 11 6 8.6165 -2.0793 -0.6248 12 6 8.7981 -2.5704 0.8128 13 1 9.3041 -1.8025 1.3979 14 8 9.5841 -3.7638 0.8128 15 6 7.4284 -2.8614 1.4292 16 6 6.5873 -1.5839 1.4290 17 6 4.0668 2.5363 -0.0065 18 6 3.3038 3.6836 -0.0064 19 6 3.9767 5.0320 -0.0122 20 8 4.6944 5.2009 -1.2363 21 14 2.6892 6.3694 0.1425 22 6 1.9206 3.6033 -0.0011 23 6 1.2924 2.3740 0.0048 24 1 -0.3634 -1.0277 0.0005 25 1 -0.3633 0.5138 0.8901 26 1 -0.3634 0.5138 -0.8899 27 1 6.0356 0.9985 -0.0118 28 1 7.6459 -0.4510 -1.6488 29 1 8.2815 -0.0336 -0.0395 30 1 8.1105 -2.8473 -1.2099 31 1 9.5925 -1.8719 -1.0636 32 1 10.4676 -3.6529 0.4353 33 1 7.5577 -3.2109 2.4535 34 1 6.9224 -3.6293 0.8441 35 1 7.0934 -0.8163 2.0143 36 1 5.6114 -1.7911 1.8682 37 1 5.1447 2.6037 -0.0114 38 1 4.6696 5.0958 0.8268 39 1 4.1395 5.1555 -2.0270 40 1 3.3401 7.7041 0.1386 41 1 1.7198 6.2733 -0.9784 42 1 1.3304 4.5077 -0.0015 43 1 0.2139 2.3194 0.0085 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_12496546.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:59:42 Heat of formation + Delta-G solvation = -129.170234 kcal Electronic energy + Delta-G solvation = -25930.985278 eV Core-core repulsion = 22135.827221 eV Total energy + Delta-G solvation = -3795.158056 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -41.78701 -40.61718 -39.30466 -39.22761 -37.28802 -36.86098 -34.47012 -32.65131 -31.91218 -31.88768 -29.36973 -28.51105 -26.24778 -25.26879 -23.89965 -23.35251 -22.31480 -21.38299 -20.93135 -19.51611 -18.48294 -18.20823 -18.10639 -17.51591 -16.86869 -16.76964 -16.34045 -16.22301 -15.95186 -15.87495 -15.60264 -15.38345 -14.86512 -14.76725 -14.59053 -14.41708 -14.08023 -13.70023 -13.56222 -13.36701 -13.27177 -13.19789 -12.73866 -12.47167 -12.42818 -12.27177 -12.14775 -12.11149 -11.85072 -11.71403 -11.23650 -10.89787 -10.80979 -10.53359 -10.24017 -9.95177 -9.30678 -5.05050 -0.26189 0.17251 1.19031 1.49471 1.86399 1.88970 2.13223 2.20971 2.72152 3.22286 3.27198 3.47171 3.54751 3.60205 3.63984 3.65900 3.94541 4.01047 4.05654 4.10575 4.17376 4.18566 4.18952 4.31887 4.36072 4.36851 4.41145 4.47912 4.56156 4.62768 4.63841 4.82925 4.86043 4.94529 4.98109 5.05724 5.07809 5.17653 5.21384 5.25601 5.35180 5.47626 5.56479 6.27480 6.30841 6.57508 6.70596 7.36392 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.193 3.807 4 C -0.175 4.175 5 C 0.562 3.438 6 O -0.514 6.514 7 N -0.728 5.728 8 C 0.146 3.854 9 H 0.092 0.908 10 C -0.124 4.124 11 C -0.148 4.148 12 C 0.103 3.897 13 H 0.056 0.944 14 O -0.567 6.567 15 C -0.111 4.111 16 C -0.126 4.126 17 C -0.019 4.019 18 C -0.167 4.167 19 C -0.069 4.069 20 O -0.530 6.530 21 Si 0.683 3.317 22 C -0.049 4.049 23 C -0.214 4.214 24 H 0.105 0.895 25 H 0.059 0.941 26 H 0.058 0.942 27 H 0.398 0.602 28 H 0.074 0.926 29 H 0.070 0.930 30 H 0.075 0.925 31 H 0.071 0.929 32 H 0.379 0.621 33 H 0.074 0.926 34 H 0.073 0.927 35 H 0.066 0.934 36 H 0.076 0.924 37 H 0.135 0.865 38 H 0.119 0.881 39 H 0.377 0.623 40 H -0.256 1.256 41 H -0.260 1.260 42 H 0.134 0.866 43 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.796 4.145 0.847 4.305 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.144 3.856 4 C -0.179 4.179 5 C 0.349 3.651 6 O -0.390 6.390 7 N -0.381 5.381 8 C 0.041 3.959 9 H 0.110 0.890 10 C -0.163 4.163 11 C -0.187 4.187 12 C 0.044 3.956 13 H 0.074 0.926 14 O -0.373 6.373 15 C -0.149 4.149 16 C -0.165 4.165 17 C -0.038 4.038 18 C -0.168 4.168 19 C -0.179 4.179 20 O -0.337 6.337 21 Si 0.585 3.415 22 C -0.067 4.067 23 C -0.233 4.233 24 H 0.124 0.876 25 H 0.078 0.922 26 H 0.076 0.924 27 H 0.233 0.767 28 H 0.093 0.907 29 H 0.089 0.911 30 H 0.094 0.906 31 H 0.090 0.910 32 H 0.226 0.774 33 H 0.092 0.908 34 H 0.092 0.908 35 H 0.085 0.915 36 H 0.095 0.905 37 H 0.153 0.847 38 H 0.137 0.863 39 H 0.224 0.776 40 H -0.181 1.181 41 H -0.185 1.185 42 H 0.151 0.849 43 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -1.537 3.647 1.161 4.124 hybrid contribution 0.697 0.598 -1.425 1.695 sum -0.840 4.245 -0.263 4.336 Atomic orbital electron populations 1.23238 0.78177 1.04780 1.01445 1.86383 1.21206 1.25189 1.86141 1.19102 0.90957 0.85068 0.90432 1.19350 0.90903 0.93926 1.13677 1.17948 0.81874 0.88659 0.76598 1.90849 1.71480 1.28551 1.48086 1.45964 1.05890 1.09648 1.76550 1.21014 0.90895 0.87142 0.96824 0.89032 1.21750 0.94487 0.98237 1.01785 1.22218 1.00672 0.97698 0.98076 1.21860 0.92353 0.86622 0.94760 0.92617 1.86539 1.30292 1.34861 1.85614 1.21418 0.93456 0.97974 1.02020 1.21879 1.00863 0.97121 0.96637 1.20973 0.99847 0.89859 0.93134 1.20052 0.93534 0.95908 1.07264 1.24935 1.04113 0.99035 0.89784 1.86603 1.37458 1.94257 1.15340 0.95006 0.78788 0.77662 0.90067 1.21040 0.93802 0.97472 0.94356 1.21233 1.00742 0.91562 1.09739 0.87648 0.92227 0.92371 0.76717 0.90744 0.91099 0.90609 0.91044 0.77424 0.90770 0.90810 0.91499 0.90506 0.84737 0.86303 0.77575 1.18069 1.18482 0.84855 0.84156 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.28 -0.98 8.57 -40.53 -0.35 -1.32 16 3 C 0.19 0.43 6.70 -38.69 -0.26 0.17 16 4 C -0.17 -0.36 5.89 -104.85 -0.62 -0.98 16 5 C 0.56 2.01 7.73 -12.47 -0.10 1.91 16 6 O -0.51 -3.80 14.82 -16.59 -0.25 -4.05 16 7 N -0.73 -0.33 5.03 -54.85 -0.28 -0.60 16 8 C 0.15 0.07 2.46 -67.93 -0.17 -0.09 16 9 H 0.09 0.25 7.58 -51.93 -0.39 -0.15 16 10 C -0.12 0.19 5.39 -26.73 -0.14 0.05 16 11 C -0.15 0.17 5.54 -26.73 -0.15 0.02 16 12 C 0.10 0.00 3.47 -26.73 -0.09 -0.10 16 13 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 14 O -0.57 -0.68 13.32 -35.23 -0.47 -1.15 16 15 C -0.11 -0.11 5.57 -26.76 -0.15 -0.26 16 16 C -0.13 -0.08 5.49 -26.76 -0.15 -0.23 16 17 C -0.02 0.01 9.16 -39.20 -0.36 -0.35 16 18 C -0.17 0.17 5.35 -104.67 -0.56 -0.39 16 19 C -0.07 0.12 2.79 36.00 0.10 0.22 16 20 O -0.53 0.14 12.83 -35.23 -0.45 -0.31 16 21 Si 0.68 -1.43 29.87 -169.99 -5.08 -6.51 16 22 C -0.05 0.06 8.65 -39.53 -0.34 -0.28 16 23 C -0.21 0.08 9.03 -39.47 -0.36 -0.28 16 24 H 0.11 -0.18 8.14 -51.93 -0.42 -0.60 16 25 H 0.06 -0.14 7.65 -51.92 -0.40 -0.54 16 26 H 0.06 -0.13 7.67 -51.93 -0.40 -0.53 16 27 H 0.40 -0.82 6.63 -40.82 -0.27 -1.09 16 28 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 29 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 30 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 31 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 32 H 0.38 -1.08 9.08 45.56 0.41 -0.67 16 33 H 0.07 0.10 8.14 -51.93 -0.42 -0.33 16 34 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 35 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 36 H 0.08 0.20 8.14 -51.93 -0.42 -0.23 16 37 H 0.13 -0.30 6.40 -52.49 -0.34 -0.64 16 38 H 0.12 -0.31 7.96 -51.93 -0.41 -0.72 16 39 H 0.38 -1.05 8.70 45.56 0.40 -0.66 16 40 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 41 H -0.26 0.07 7.00 56.52 0.40 0.47 16 42 H 0.13 -0.43 4.81 -52.49 -0.25 -0.68 16 43 H 0.14 -0.36 6.30 -52.49 -0.33 -0.69 16 LS Contribution 345.78 15.07 5.21 5.21 Total: 0.00 -9.28 345.78 -9.42 -18.69 By element: Atomic # 1 Polarization: -4.94 SS G_CDS: -5.41 Total: -10.36 kcal Atomic # 6 Polarization: 2.74 SS G_CDS: -2.35 Total: 0.40 kcal Atomic # 7 Polarization: -0.33 SS G_CDS: -0.28 Total: -0.60 kcal Atomic # 8 Polarization: -5.32 SS G_CDS: -1.51 Total: -6.83 kcal Atomic # 14 Polarization: -1.43 SS G_CDS: -5.08 Total: -6.51 kcal Total LS contribution 5.21 Total: 5.21 kcal Total: -9.28 -9.42 -18.69 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_12496546.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.479 kcal (2) G-P(sol) polarization free energy of solvation -9.276 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -119.755 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.416 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.692 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.170 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds