Wall clock time and date at job start Sat Mar 6 2021 14:59:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35652 * 117.00234 * 2 1 4 4 C 1.40133 * 120.15256 * 180.02562 * 3 2 1 5 5 C 1.47535 * 120.19100 * 0.02562 * 4 3 2 6 6 O 1.21588 * 120.00106 * 359.71818 * 5 4 3 7 7 N 1.34775 * 120.00391 * 179.72486 * 5 4 3 8 8 C 1.46500 * 120.00366 * 179.97438 * 7 5 4 9 9 H 1.09000 * 109.47175 * 34.99887 * 8 7 5 10 10 C 1.53006 * 109.46998 * 154.99756 * 8 7 5 11 11 C 1.52999 * 109.46626 * 179.97438 * 10 8 7 12 12 C 1.52997 * 109.47592 * 300.00035 * 11 10 8 13 13 H 1.09000 * 109.47140 * 300.00346 * 12 11 10 14 14 O 1.42896 * 109.47412 * 180.02562 * 12 11 10 15 15 C 1.52996 * 109.47165 * 60.00300 * 12 11 10 16 16 C 1.52997 * 109.47204 * 274.99782 * 8 7 5 17 17 C 1.39710 * 119.61982 * 179.72101 * 4 3 2 18 18 C 1.37786 * 119.90581 * 0.25380 * 17 4 3 19 19 C 1.50697 * 119.85231 * 179.97438 * 18 17 4 20 20 O 1.42899 * 109.47246 * 64.99708 * 19 18 17 21 21 Si 1.86293 * 109.47497 * 185.00128 * 19 18 17 22 22 C 1.38550 * 120.29888 * 359.97438 * 18 17 4 23 23 C 1.38051 * 120.39424 * 0.02562 * 22 18 17 24 24 H 1.09004 * 109.47431 * 180.02562 * 1 2 3 25 25 H 1.09007 * 109.46936 * 299.99478 * 1 2 3 26 26 H 1.08992 * 109.47670 * 59.99792 * 1 2 3 27 27 H 0.97001 * 119.99752 * 359.97438 * 7 5 4 28 28 H 1.08993 * 109.46955 * 300.00226 * 10 8 7 29 29 H 1.09000 * 109.47050 * 60.00054 * 10 8 7 30 30 H 1.09000 * 109.47160 * 60.00369 * 11 10 8 31 31 H 1.09002 * 109.46719 * 180.02562 * 11 10 8 32 32 H 0.96708 * 114.00101 * 59.99449 * 14 12 11 33 33 H 1.08992 * 109.47534 * 180.02562 * 15 12 11 34 34 H 1.08996 * 109.47134 * 59.99508 * 15 12 11 35 35 H 1.09000 * 109.47140 * 300.00127 * 16 8 7 36 36 H 1.09001 * 109.47230 * 59.99271 * 16 8 7 37 37 H 1.08001 * 120.04777 * 180.27397 * 17 4 3 38 38 H 1.09003 * 109.47045 * 305.00721 * 19 18 17 39 39 H 0.96707 * 113.99402 * 59.99848 * 20 19 18 40 40 H 1.48503 * 110.00337 * 179.97438 * 21 19 18 41 41 H 1.48498 * 110.00052 * 301.32232 * 21 19 18 42 42 H 1.07997 * 119.80070 * 180.02562 * 22 18 17 43 43 H 1.07996 * 119.96395 * 180.02562 * 23 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0448 1.2086 0.0000 4 6 3.4441 1.2857 -0.0005 5 6 4.2549 0.0531 -0.0017 6 8 3.7094 -1.0335 0.0030 7 7 5.6004 0.1316 -0.0078 8 6 6.4056 -1.0923 -0.0084 9 1 5.8994 -1.8600 -0.5937 10 6 7.7754 -0.8013 -0.6248 11 6 8.6165 -2.0793 -0.6248 12 6 8.7981 -2.5704 0.8128 13 1 9.3041 -1.8025 1.3979 14 8 9.5841 -3.7638 0.8128 15 6 7.4284 -2.8614 1.4292 16 6 6.5873 -1.5839 1.4290 17 6 4.0668 2.5363 -0.0065 18 6 3.3038 3.6836 -0.0064 19 6 3.9767 5.0320 -0.0122 20 8 4.6944 5.2009 -1.2363 21 14 2.6892 6.3694 0.1425 22 6 1.9206 3.6033 -0.0011 23 6 1.2924 2.3740 0.0048 24 1 -0.3634 -1.0277 0.0005 25 1 -0.3633 0.5138 0.8901 26 1 -0.3634 0.5138 -0.8899 27 1 6.0356 0.9985 -0.0118 28 1 7.6459 -0.4510 -1.6488 29 1 8.2815 -0.0336 -0.0395 30 1 8.1105 -2.8473 -1.2099 31 1 9.5925 -1.8719 -1.0636 32 1 10.4676 -3.6529 0.4353 33 1 7.5577 -3.2109 2.4535 34 1 6.9224 -3.6293 0.8441 35 1 7.0934 -0.8163 2.0143 36 1 5.6114 -1.7911 1.8682 37 1 5.1447 2.6037 -0.0114 38 1 4.6696 5.0958 0.8268 39 1 4.1395 5.1555 -2.0270 40 1 3.3401 7.7041 0.1386 41 1 1.7198 6.2733 -0.9784 42 1 1.3304 4.5077 -0.0015 43 1 0.2139 2.3194 0.0085 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_12496546.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:59:41 Heat of formation + Delta-G solvation = -131.775326 kcal Electronic energy + Delta-G solvation = -25931.098243 eV Core-core repulsion = 22135.827221 eV Total energy + Delta-G solvation = -3795.271022 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -41.84247 -40.67696 -39.39841 -39.22323 -37.23826 -36.96436 -34.61124 -32.64838 -31.91039 -31.85007 -29.40313 -28.44886 -26.16320 -25.31158 -23.90597 -23.34718 -22.29675 -21.51768 -20.95774 -19.51941 -18.44560 -18.23191 -18.15403 -17.53954 -16.89186 -16.80959 -16.39899 -16.12171 -15.97153 -15.84444 -15.66820 -15.44453 -14.83039 -14.75891 -14.53607 -14.51240 -14.12703 -13.67906 -13.53923 -13.38686 -13.27852 -13.12769 -12.81350 -12.46182 -12.40753 -12.20909 -12.19063 -12.05308 -11.88693 -11.65333 -11.27109 -11.02615 -10.79958 -10.54244 -10.28625 -10.03827 -9.30895 -4.88806 -0.27083 0.21040 1.33987 1.61637 1.76455 1.99379 2.05133 2.26131 2.67035 3.26389 3.42358 3.51609 3.61400 3.64143 3.66491 3.74094 3.98057 4.02615 4.10605 4.13881 4.18455 4.28761 4.30541 4.34453 4.34795 4.40081 4.41639 4.62558 4.64316 4.67680 4.72855 4.85711 4.90627 4.95296 4.99338 5.07315 5.08606 5.11073 5.22238 5.27021 5.31226 5.46753 5.56323 6.29206 6.51415 6.52081 6.88768 7.21110 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.314 6.314 3 C 0.171 3.829 4 C -0.197 4.197 5 C 0.556 3.444 6 O -0.565 6.565 7 N -0.713 5.713 8 C 0.146 3.854 9 H 0.062 0.938 10 C -0.116 4.116 11 C -0.144 4.144 12 C 0.104 3.896 13 H 0.073 0.927 14 O -0.590 6.590 15 C -0.112 4.112 16 C -0.117 4.117 17 C -0.015 4.015 18 C -0.164 4.164 19 C -0.072 4.072 20 O -0.546 6.546 21 Si 0.760 3.240 22 C -0.044 4.044 23 C -0.213 4.213 24 H 0.106 0.894 25 H 0.075 0.925 26 H 0.071 0.929 27 H 0.412 0.588 28 H 0.079 0.921 29 H 0.092 0.908 30 H 0.058 0.942 31 H 0.091 0.909 32 H 0.395 0.605 33 H 0.068 0.932 34 H 0.053 0.947 35 H 0.084 0.916 36 H 0.050 0.950 37 H 0.153 0.847 38 H 0.132 0.868 39 H 0.386 0.614 40 H -0.305 1.305 41 H -0.280 1.280 42 H 0.156 0.844 43 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.113 6.072 0.922 6.143 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 O -0.226 6.226 3 C 0.122 3.878 4 C -0.201 4.201 5 C 0.345 3.655 6 O -0.444 6.444 7 N -0.365 5.365 8 C 0.041 3.959 9 H 0.080 0.920 10 C -0.154 4.154 11 C -0.182 4.182 12 C 0.046 3.954 13 H 0.090 0.910 14 O -0.399 6.399 15 C -0.150 4.150 16 C -0.156 4.156 17 C -0.033 4.033 18 C -0.164 4.164 19 C -0.181 4.181 20 O -0.354 6.354 21 Si 0.666 3.334 22 C -0.062 4.062 23 C -0.231 4.231 24 H 0.125 0.875 25 H 0.094 0.906 26 H 0.090 0.910 27 H 0.250 0.750 28 H 0.098 0.902 29 H 0.111 0.889 30 H 0.077 0.923 31 H 0.110 0.890 32 H 0.245 0.755 33 H 0.087 0.913 34 H 0.072 0.928 35 H 0.103 0.897 36 H 0.069 0.931 37 H 0.170 0.830 38 H 0.149 0.851 39 H 0.235 0.765 40 H -0.234 1.234 41 H -0.207 1.207 42 H 0.173 0.827 43 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -0.821 5.583 1.233 5.776 hybrid contribution 0.487 0.048 -1.464 1.543 sum -0.335 5.631 -0.231 5.645 Atomic orbital electron populations 1.23442 0.76548 1.05432 1.02864 1.86337 1.23195 1.26490 1.86560 1.19436 0.91394 0.85525 0.91427 1.19422 0.91115 0.94026 1.15518 1.18334 0.82712 0.88650 0.75819 1.90815 1.72515 1.30386 1.50689 1.45852 1.05076 1.10390 1.75230 1.20983 0.91872 0.86557 0.96454 0.92022 1.21709 0.92830 0.98621 1.02219 1.22179 1.01522 0.97304 0.97211 1.21869 0.91416 0.86638 0.95515 0.90957 1.86494 1.31664 1.35716 1.86012 1.21402 0.94505 0.97568 1.01510 1.21767 0.99594 0.97465 0.96793 1.21127 1.00794 0.89062 0.92350 1.20168 0.93730 0.95914 1.06629 1.25094 1.04600 0.98569 0.89850 1.86581 1.38439 1.94265 1.16164 0.94145 0.76770 0.74146 0.88367 1.21314 0.93945 0.97898 0.93018 1.21460 1.01725 0.90920 1.09013 0.87541 0.90633 0.90998 0.74988 0.90212 0.88900 0.92269 0.89023 0.75475 0.91303 0.92801 0.89715 0.93132 0.82995 0.85061 0.76453 1.23370 1.20653 0.82717 0.82135 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 9.81 113.37 1.11 1.10 16 2 O -0.31 -2.84 8.57 -68.76 -0.59 -3.43 16 3 C 0.17 0.94 6.70 22.84 0.15 1.09 16 4 C -0.20 -1.00 5.89 -20.01 -0.12 -1.12 16 5 C 0.56 5.09 7.73 86.70 0.67 5.76 16 6 O -0.56 -10.33 14.82 16.92 0.25 -10.08 16 7 N -0.71 -1.22 5.03 -445.70 -2.24 -3.46 16 8 C 0.15 0.33 2.46 44.99 0.11 0.44 16 9 H 0.06 0.53 7.58 -2.39 -0.02 0.51 16 10 C -0.12 0.44 5.39 30.60 0.16 0.61 16 11 C -0.14 0.39 5.54 30.59 0.17 0.56 16 12 C 0.10 -0.02 3.47 30.59 0.11 0.08 16 13 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 14 O -0.59 -1.45 13.32 -148.98 -1.98 -3.44 16 15 C -0.11 -0.40 5.57 30.58 0.17 -0.23 16 16 C -0.12 -0.31 5.49 30.58 0.17 -0.15 16 17 C -0.01 0.02 9.16 22.52 0.21 0.23 16 18 C -0.16 0.56 5.35 -19.90 -0.11 0.45 16 19 C -0.07 0.36 2.79 71.23 0.20 0.56 16 20 O -0.55 1.05 12.83 -148.98 -1.91 -0.86 16 21 Si 0.76 -4.11 29.87 68.60 2.05 -2.06 16 22 C -0.04 0.18 8.65 22.30 0.19 0.37 16 23 C -0.21 0.28 9.03 22.34 0.20 0.48 16 24 H 0.11 -0.20 8.14 -2.38 -0.02 -0.22 16 25 H 0.08 -0.35 7.65 -2.38 -0.02 -0.37 16 26 H 0.07 -0.30 7.67 -2.39 -0.02 -0.32 16 27 H 0.41 -1.94 6.63 -92.71 -0.61 -2.55 16 28 H 0.08 -0.34 8.14 -2.39 -0.02 -0.36 16 29 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 30 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 31 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 32 H 0.40 -2.47 9.08 -74.05 -0.67 -3.14 16 33 H 0.07 0.29 8.14 -2.39 -0.02 0.28 16 34 H 0.05 0.39 8.14 -2.39 -0.02 0.37 16 35 H 0.08 -0.08 8.14 -2.39 -0.02 -0.10 16 36 H 0.05 0.41 8.14 -2.39 -0.02 0.39 16 37 H 0.15 -0.89 6.40 -2.91 -0.02 -0.91 16 38 H 0.13 -0.96 7.96 -2.39 -0.02 -0.98 16 39 H 0.39 -2.64 8.70 -74.05 -0.64 -3.28 16 40 H -0.31 -0.95 7.11 99.48 0.71 -0.25 16 41 H -0.28 0.56 7.00 99.48 0.70 1.26 16 42 H 0.16 -1.36 4.81 -2.91 -0.01 -1.37 16 43 H 0.16 -1.00 6.30 -2.91 -0.02 -1.02 16 Total: 0.00 -24.84 345.78 -1.87 -26.72 By element: Atomic # 1 Polarization: -12.78 SS G_CDS: -0.85 Total: -13.62 kcal Atomic # 6 Polarization: 6.83 SS G_CDS: 3.40 Total: 10.23 kcal Atomic # 7 Polarization: -1.22 SS G_CDS: -2.24 Total: -3.46 kcal Atomic # 8 Polarization: -13.57 SS G_CDS: -4.23 Total: -17.80 kcal Atomic # 14 Polarization: -4.11 SS G_CDS: 2.05 Total: -2.06 kcal Total: -24.84 -1.87 -26.72 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_12496546.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.060 kcal (2) G-P(sol) polarization free energy of solvation -24.843 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.903 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.872 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.715 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.775 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds