Wall clock time and date at job start Sat Mar 6 2021 14:59:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86300 * 109.47300 * 2 1 4 4 C 1.50694 * 109.47123 * 120.00385 * 2 1 3 5 5 C 1.37818 * 119.94057 * 14.99892 * 4 2 1 6 6 C 1.39678 * 119.87732 * 180.02562 * 5 4 2 7 7 C 1.47726 * 120.11336 * 180.02562 * 6 5 4 8 8 O 1.21562 * 119.99968 * 0.02562 * 7 6 5 9 9 N 1.34780 * 119.99255 * 179.97438 * 7 6 5 10 10 C 1.46506 * 119.99368 * 179.97438 * 9 7 6 11 11 H 1.09000 * 109.47020 * 35.00475 * 10 9 7 12 12 C 1.52997 * 109.46741 * 155.00201 * 10 9 7 13 13 C 1.52996 * 109.47165 * 180.02562 * 12 10 9 14 14 C 1.53002 * 109.46969 * 299.99896 * 13 12 10 15 15 H 1.09000 * 109.47312 * 299.99939 * 14 13 12 16 16 O 1.42905 * 109.47079 * 179.97438 * 14 13 12 17 17 C 1.53005 * 109.46982 * 60.00261 * 14 13 12 18 18 C 1.52989 * 109.47205 * 275.00116 * 10 9 7 19 19 C 1.39630 * 119.76297 * 0.27465 * 6 5 4 20 20 C 1.37857 * 119.88001 * 359.44654 * 19 6 5 21 21 C 1.38637 * 120.11844 * 0.57615 * 20 19 6 22 22 F 1.35105 * 119.87926 * 179.69388 * 21 20 19 23 23 H 0.96693 * 113.99976 * 299.99672 * 1 2 3 24 24 H 1.09003 * 109.46907 * 240.00426 * 2 1 3 25 25 H 1.48495 * 110.00149 * 178.68335 * 3 2 1 26 26 H 1.48496 * 110.00041 * 300.00464 * 3 2 1 27 27 H 1.07993 * 120.06146 * 0.02562 * 5 4 2 28 28 H 0.96991 * 120.00485 * 0.02562 * 9 7 6 29 29 H 1.09000 * 109.47140 * 60.00347 * 12 10 9 30 30 H 1.09001 * 109.47375 * 300.00330 * 12 10 9 31 31 H 1.09004 * 109.47298 * 180.02562 * 13 12 10 32 32 H 1.09004 * 109.47552 * 59.99988 * 13 12 10 33 33 H 0.96705 * 113.99788 * 180.02562 * 16 14 13 34 34 H 1.08992 * 109.47061 * 59.99708 * 17 14 13 35 35 H 1.09001 * 109.46812 * 180.02562 * 17 14 13 36 36 H 1.09000 * 109.47424 * 300.00111 * 18 10 9 37 37 H 1.09001 * 109.47294 * 60.00754 * 18 10 9 38 38 H 1.08001 * 120.05838 * 179.70238 * 19 6 5 39 39 H 1.08002 * 119.94093 * 180.29219 * 20 19 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 1.0731 -1.4947 1.9704 6 6 1.5399 -2.1522 3.1109 7 6 0.6246 -2.9946 3.9077 8 8 -0.5370 -3.1168 3.5709 9 7 1.0778 -3.6283 5.0075 10 6 0.1699 -4.4633 5.7980 11 1 -0.5393 -4.9579 5.1343 12 6 0.9779 -5.5172 6.5577 13 6 0.0298 -6.3897 7.3828 14 6 -0.7312 -5.5138 8.3801 15 1 -0.0223 -5.0191 9.0441 16 8 -1.6172 -6.3286 9.1504 17 6 -1.5393 -4.4598 7.6204 18 6 -0.5905 -3.5871 6.7953 19 6 2.8735 -2.0062 3.4981 20 6 3.7249 -1.2239 2.7473 21 6 3.2562 -0.5732 1.6164 22 9 4.0933 0.1972 0.8877 23 1 -0.3933 0.4416 0.7650 24 1 1.7924 -0.5138 -0.8901 25 1 3.5346 1.7703 0.0321 26 1 1.5615 2.4679 -1.2084 27 1 0.0414 -1.6007 1.6691 28 1 2.0047 -3.5311 5.2760 29 1 1.6871 -5.0226 7.2214 30 1 1.5197 -6.1415 5.8472 31 1 0.6055 -7.1403 7.9244 32 1 -0.6792 -6.8844 6.7189 33 1 -2.1337 -5.8382 9.8046 34 1 -2.2481 -4.9545 6.9565 35 1 -2.0810 -3.8356 8.3309 36 1 0.1187 -3.0924 7.4589 37 1 -1.1662 -2.8362 6.2540 38 1 3.2383 -2.5086 4.3818 39 1 4.7578 -1.1141 3.0432 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_12496548.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:59:45 Heat of formation + Delta-G solvation = -132.746746 kcal Electronic energy + Delta-G solvation = -23813.636741 eV Core-core repulsion = 20023.089431 eV Total energy + Delta-G solvation = -3790.547310 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.126 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -50.40898 -41.57768 -40.32810 -39.30396 -37.73529 -37.01439 -34.66235 -32.80582 -32.06836 -31.96425 -29.43005 -27.14497 -25.15795 -23.98299 -23.33270 -23.02987 -21.52092 -21.02721 -19.38334 -18.81168 -18.28808 -18.15209 -17.73777 -17.18510 -17.06331 -16.49753 -16.05868 -15.85761 -15.77676 -15.59476 -15.21908 -15.17978 -14.80699 -14.72316 -14.34533 -14.03154 -13.66055 -13.46510 -13.42243 -13.33453 -13.07814 -12.81769 -12.51610 -12.37140 -12.28031 -11.84629 -11.39011 -11.36042 -11.06812 -10.93938 -10.82139 -10.23108 -10.10412 -9.75672 -5.04622 -0.55404 -0.07086 1.19888 1.61025 1.64266 1.92672 2.00737 2.55060 2.92583 3.11263 3.16794 3.28361 3.45927 3.51285 3.60339 3.61774 3.81534 3.91643 4.01308 4.04733 4.09233 4.17887 4.29028 4.31521 4.33165 4.47966 4.54003 4.69156 4.73342 4.77622 4.85553 4.91525 4.96807 4.99056 5.00154 5.03453 5.15474 5.23252 5.37082 5.52431 6.34678 6.41646 6.64758 7.09474 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.066 4.066 3 Si 0.682 3.318 4 C -0.155 4.155 5 C -0.020 4.020 6 C -0.142 4.142 7 C 0.562 3.438 8 O -0.527 6.527 9 N -0.723 5.723 10 C 0.143 3.857 11 H 0.094 0.906 12 C -0.124 4.124 13 C -0.110 4.110 14 C 0.103 3.897 15 H 0.056 0.944 16 O -0.568 6.568 17 C -0.150 4.150 18 C -0.127 4.127 19 C -0.060 4.060 20 C -0.152 4.152 21 C 0.118 3.882 22 F -0.121 7.121 23 H 0.381 0.619 24 H 0.123 0.877 25 H -0.228 1.228 26 H -0.258 1.258 27 H 0.156 0.844 28 H 0.400 0.600 29 H 0.072 0.928 30 H 0.078 0.922 31 H 0.077 0.923 32 H 0.075 0.925 33 H 0.380 0.620 34 H 0.075 0.925 35 H 0.069 0.931 36 H 0.066 0.934 37 H 0.073 0.927 38 H 0.137 0.863 39 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.946 1.564 5.232 6.205 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.176 4.176 3 Si 0.582 3.418 4 C -0.156 4.156 5 C -0.038 4.038 6 C -0.146 4.146 7 C 0.349 3.651 8 O -0.404 6.404 9 N -0.375 5.375 10 C 0.039 3.961 11 H 0.112 0.888 12 C -0.162 4.162 13 C -0.148 4.148 14 C 0.044 3.956 15 H 0.074 0.926 16 O -0.374 6.374 17 C -0.188 4.188 18 C -0.166 4.166 19 C -0.078 4.078 20 C -0.170 4.170 21 C 0.098 3.902 22 F -0.099 7.099 23 H 0.229 0.771 24 H 0.140 0.860 25 H -0.152 1.152 26 H -0.183 1.183 27 H 0.174 0.826 28 H 0.235 0.765 29 H 0.090 0.910 30 H 0.097 0.903 31 H 0.095 0.905 32 H 0.093 0.907 33 H 0.227 0.773 34 H 0.094 0.906 35 H 0.088 0.912 36 H 0.085 0.915 37 H 0.092 0.908 38 H 0.155 0.845 39 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 2.968 1.305 3.605 4.848 hybrid contribution 0.537 -0.002 0.211 0.577 sum 3.505 1.303 3.816 5.343 Atomic orbital electron populations 1.86522 1.16586 1.81446 1.49500 1.25014 0.85637 1.10309 0.96616 0.95257 0.81741 0.76478 0.88360 1.20373 0.92766 1.02258 1.00199 1.20977 1.00958 0.90880 0.91025 1.19988 0.94246 1.02129 0.98187 1.18127 0.87355 0.79399 0.80217 1.90824 1.17667 1.62345 1.69586 1.45971 1.14288 1.49980 1.27252 1.21085 0.91911 0.90643 0.92474 0.88844 1.21773 0.98176 0.97182 0.99090 1.21404 0.98255 0.97880 0.97275 1.21853 0.90877 0.90798 0.92088 0.92604 1.86523 1.58408 1.38473 1.53974 1.22250 0.98831 0.97816 0.99933 1.21874 0.98638 0.98439 0.97615 1.21170 0.91914 0.96114 0.98638 1.21096 1.01719 0.99280 0.94942 1.17779 0.87606 0.93142 0.91628 1.91585 1.71039 1.71484 1.75825 0.77072 0.85972 1.15216 1.18321 0.82649 0.76502 0.90961 0.90337 0.90456 0.90659 0.77267 0.90637 0.91189 0.91483 0.90794 0.84489 0.83592 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.13 11.64 -35.23 -0.41 -0.54 16 2 C -0.07 0.00 2.96 36.00 0.11 0.11 16 3 Si 0.68 -0.37 30.81 -169.99 -5.24 -5.61 16 4 C -0.15 0.01 5.13 -104.62 -0.54 -0.52 16 5 C -0.02 -0.01 8.78 -39.20 -0.34 -0.35 16 6 C -0.14 0.04 5.87 -104.96 -0.62 -0.57 16 7 C 0.56 0.60 7.73 -12.38 -0.10 0.51 16 8 O -0.53 -2.58 16.01 5.31 0.09 -2.49 16 9 N -0.72 1.26 5.03 -54.79 -0.28 0.98 16 10 C 0.14 -0.17 2.45 -67.93 -0.17 -0.34 16 11 H 0.09 0.10 7.58 -51.93 -0.39 -0.30 16 12 C -0.12 0.34 5.39 -26.73 -0.14 0.20 16 13 C -0.11 0.14 5.57 -26.73 -0.15 -0.01 16 14 C 0.10 -0.12 3.47 -26.73 -0.09 -0.21 16 15 H 0.06 -0.11 8.14 -51.93 -0.42 -0.53 16 16 O -0.57 -0.20 13.32 -35.23 -0.47 -0.67 16 17 C -0.15 0.20 5.55 -26.70 -0.15 0.05 16 18 C -0.13 0.16 5.50 -26.71 -0.15 0.01 16 19 C -0.06 0.15 9.54 -39.20 -0.37 -0.22 16 20 C -0.15 0.29 10.01 -39.57 -0.40 -0.11 16 21 C 0.12 -0.01 6.67 -39.27 -0.26 -0.27 16 22 F -0.12 -0.16 12.81 2.25 0.03 -0.13 16 23 H 0.38 -1.38 8.43 45.56 0.38 -1.00 16 24 H 0.12 0.05 7.96 -51.93 -0.41 -0.36 16 25 H -0.23 -0.37 5.27 56.52 0.30 -0.08 16 26 H -0.26 -0.70 7.11 56.52 0.40 -0.30 16 27 H 0.16 0.14 6.66 -52.49 -0.35 -0.21 16 28 H 0.40 -1.82 6.63 -40.82 -0.27 -2.09 16 29 H 0.07 -0.28 8.14 -51.93 -0.42 -0.71 16 30 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 31 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 32 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 33 H 0.38 -1.31 9.08 45.56 0.41 -0.89 16 34 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 35 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 36 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 37 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 38 H 0.14 -0.78 6.40 -52.49 -0.34 -1.11 16 39 H 0.15 -0.55 8.06 -52.49 -0.42 -0.97 16 LS Contribution 320.69 15.07 4.83 4.83 Total: 0.00 -8.13 320.69 -9.31 -17.44 By element: Atomic # 1 Polarization: -7.59 SS G_CDS: -4.49 Total: -12.08 kcal Atomic # 6 Polarization: 1.63 SS G_CDS: -3.37 Total: -1.74 kcal Atomic # 7 Polarization: 1.26 SS G_CDS: -0.28 Total: 0.98 kcal Atomic # 8 Polarization: -2.91 SS G_CDS: -0.79 Total: -3.70 kcal Atomic # 9 Polarization: -0.16 SS G_CDS: 0.03 Total: -0.13 kcal Atomic # 14 Polarization: -0.37 SS G_CDS: -5.24 Total: -5.61 kcal Total LS contribution 4.83 Total: 4.83 kcal Total: -8.13 -9.31 -17.44 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_12496548.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -115.307 kcal (2) G-P(sol) polarization free energy of solvation -8.134 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.441 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.305 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.440 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.747 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds