Wall clock time and date at job start Sat Mar 6 2021 14:59:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35890 * 116.99624 * 2 1 4 4 C 1.38822 * 119.93071 * 180.02562 * 3 2 1 5 5 C 1.37928 * 120.05998 * 180.02562 * 4 3 2 6 6 C 1.39353 * 119.93683 * 359.97438 * 5 4 3 7 7 C 1.48405 * 120.06556 * 179.97438 * 6 5 4 8 8 N 1.31629 * 126.03895 * 324.97989 * 7 6 5 9 9 N 1.40070 * 108.11123 * 180.02562 * 8 7 6 10 10 C 1.46492 * 125.93006 * 179.97438 * 9 8 7 11 11 C 1.50703 * 109.47441 * 305.02373 * 10 9 8 12 12 O 1.21283 * 119.99488 * 359.97438 * 11 10 9 13 13 N 1.34777 * 120.00290 * 180.02562 * 11 10 9 14 14 C 1.46498 * 119.99828 * 180.27728 * 13 11 10 15 15 H 1.09004 * 109.47372 * 34.71852 * 14 13 11 16 16 C 1.52999 * 109.46963 * 154.72290 * 14 13 11 17 17 C 1.53003 * 109.47087 * 179.97438 * 16 14 13 18 18 C 1.52997 * 109.47241 * 300.00042 * 17 16 14 19 19 H 1.08995 * 109.47096 * 299.99819 * 18 17 16 20 20 O 1.42898 * 109.47199 * 179.97438 * 18 17 16 21 21 C 1.52999 * 109.47114 * 59.99975 * 18 17 16 22 22 C 1.52997 * 109.47036 * 274.72131 * 14 13 11 23 23 C 1.35033 * 108.13781 * 0.22420 * 9 8 7 24 24 C 1.35083 * 107.98209 * 359.63480 * 23 9 8 25 25 C 1.50703 * 126.07820 * 180.10540 * 24 23 9 26 26 O 1.42896 * 109.47239 * 255.30854 * 25 24 23 27 27 Si 1.86298 * 109.46882 * 15.30736 * 25 24 23 28 28 C 1.39356 * 119.87337 * 0.27514 * 6 5 4 29 29 C 1.37925 * 119.93144 * 359.46506 * 28 6 5 30 30 H 1.08995 * 109.47022 * 179.97438 * 1 2 3 31 31 H 1.08997 * 109.47183 * 299.99627 * 1 2 3 32 32 H 1.08999 * 109.47383 * 59.99700 * 1 2 3 33 33 H 1.07997 * 119.97126 * 0.02562 * 4 3 2 34 34 H 1.08005 * 120.02918 * 179.97438 * 5 4 3 35 35 H 1.08998 * 109.47276 * 185.02289 * 10 9 8 36 36 H 1.09002 * 109.47526 * 65.02600 * 10 9 8 37 37 H 0.97001 * 119.99727 * 359.97438 * 13 11 10 38 38 H 1.08997 * 109.46923 * 299.99333 * 16 14 13 39 39 H 1.08995 * 109.47266 * 59.99845 * 16 14 13 40 40 H 1.09004 * 109.47044 * 59.99688 * 17 16 14 41 41 H 1.08997 * 109.47066 * 179.97438 * 17 16 14 42 42 H 0.96702 * 113.99911 * 179.97438 * 20 18 17 43 43 H 1.08995 * 109.47266 * 59.99948 * 21 18 17 44 44 H 1.09000 * 109.47204 * 180.02562 * 21 18 17 45 45 H 1.09009 * 109.47238 * 300.00198 * 22 14 13 46 46 H 1.08997 * 109.47293 * 60.00168 * 22 14 13 47 47 H 1.08006 * 126.00842 * 179.73436 * 23 9 8 48 48 H 1.09003 * 109.46943 * 135.30557 * 25 24 23 49 49 H 0.96696 * 114.00453 * 180.02562 * 26 25 24 50 50 H 1.48505 * 110.00057 * 178.68227 * 27 25 24 51 51 H 1.48503 * 110.00084 * 300.00013 * 27 25 24 52 52 H 1.07993 * 120.02954 * 179.70492 * 28 6 5 53 53 H 1.07999 * 119.96760 * 180.25727 * 29 28 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0458 1.2108 0.0000 4 6 3.4322 1.2819 -0.0005 5 6 4.0611 2.5095 0.0000 6 6 3.3034 3.6790 0.0005 7 6 3.9771 5.0013 0.0017 8 7 5.1051 5.2953 0.6131 9 7 5.3952 6.6434 0.3672 10 6 6.5622 7.3761 0.8645 11 6 6.6288 7.2558 2.3652 12 8 5.7843 6.6208 2.9607 13 7 7.6263 7.8546 3.0457 14 6 7.6944 7.7325 4.5040 15 1 7.3395 6.7462 4.8031 16 6 9.1422 7.9147 4.9639 17 6 9.2133 7.7878 6.4870 18 6 8.3349 8.8629 7.1299 19 1 8.6898 9.8490 6.8305 20 8 8.4008 8.7441 8.5524 21 6 6.8871 8.6807 6.6700 22 6 6.8159 8.8073 5.1473 23 6 4.4096 7.1517 -0.4033 24 6 3.5222 6.1638 -0.6508 25 6 2.2654 6.2854 -1.4735 26 8 1.1305 6.3264 -0.6062 27 14 2.3327 7.8499 -2.4826 28 6 1.9119 3.6045 0.0063 29 6 1.2885 2.3742 0.0004 30 1 -0.3633 -1.0276 -0.0005 31 1 -0.3633 0.5138 0.8900 32 1 -0.3634 0.5139 -0.8899 33 1 4.0189 0.3752 -0.0014 34 1 5.1398 2.5642 0.0000 35 1 6.4764 8.4269 0.5877 36 1 7.4681 6.9577 0.4259 37 1 8.3014 8.3627 2.5694 38 1 9.7681 7.1490 4.5056 39 1 9.4971 8.9010 4.6649 40 1 8.8583 6.8017 6.7864 41 1 10.2448 7.9172 6.8146 42 1 7.8669 9.3960 9.0267 43 1 6.5321 7.6946 6.9694 44 1 6.2613 9.4469 7.1277 45 1 7.1707 9.7936 4.8483 46 1 5.7844 8.6775 4.8197 47 1 4.3435 8.1689 -0.7604 48 1 2.1827 5.4266 -2.1396 49 1 0.2847 6.4040 -1.0684 50 1 1.1133 7.9656 -3.3223 51 1 2.4456 9.0282 -1.5858 52 1 1.3222 4.5093 0.0116 53 1 0.2101 2.3158 0.0007 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_12622750.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:59:51 Heat of formation + Delta-G solvation = -48.610042 kcal Electronic energy + Delta-G solvation = -35970.272683 eV Core-core repulsion = 31196.464879 eV Total energy + Delta-G solvation = -4773.807805 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.188 amu Computer time = 1.47 seconds Orbital eigenvalues (eV) -42.47293 -41.18618 -40.93504 -39.61640 -38.48651 -37.79543 -37.04904 -34.78964 -34.38052 -32.29466 -32.07126 -31.93404 -31.24834 -29.86513 -28.54824 -27.84536 -25.80370 -24.10006 -23.92560 -23.68500 -23.06186 -21.74673 -21.50429 -21.13859 -20.69373 -19.17420 -18.53524 -18.45424 -18.29451 -18.20635 -17.35203 -17.09294 -16.72157 -16.69204 -16.41030 -16.20232 -16.03914 -15.57461 -15.42778 -15.30172 -15.11627 -14.89310 -14.77503 -14.66989 -14.55994 -14.28003 -14.10469 -13.76092 -13.69598 -13.41153 -13.34897 -13.31745 -13.01425 -12.90119 -12.78871 -12.76194 -12.49844 -12.30244 -12.24117 -12.13547 -11.80014 -11.77058 -11.40761 -11.35110 -11.21390 -10.83476 -10.47470 -10.30637 -10.16822 -10.04199 -9.63698 -8.95329 -4.83776 0.05584 0.33500 0.79702 1.33339 1.42229 1.47835 1.67629 1.69066 2.02114 2.05959 2.31264 2.77402 3.21138 3.34537 3.52632 3.59298 3.61378 3.65723 3.75328 3.87287 3.89863 3.93286 3.97078 4.06488 4.13372 4.15016 4.17372 4.22960 4.25015 4.35058 4.35869 4.36630 4.37953 4.39635 4.54289 4.57815 4.59185 4.70824 4.75909 4.83911 4.90225 4.91344 4.95197 5.03617 5.06318 5.06964 5.08125 5.18919 5.26641 5.30612 5.41885 5.52963 5.57711 5.70187 5.92505 6.37209 6.46741 6.62210 6.69988 6.82214 7.17312 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.334 6.334 3 C 0.124 3.876 4 C -0.167 4.167 5 C -0.060 4.060 6 C -0.071 4.071 7 C 0.115 3.885 8 N -0.295 5.295 9 N -0.360 5.360 10 C 0.111 3.889 11 C 0.493 3.507 12 O -0.568 6.568 13 N -0.707 5.707 14 C 0.146 3.854 15 H 0.052 0.948 16 C -0.110 4.110 17 C -0.114 4.114 18 C 0.105 3.895 19 H 0.077 0.923 20 O -0.590 6.590 21 C -0.147 4.147 22 C -0.119 4.119 23 C 0.074 3.926 24 C -0.227 4.227 25 C -0.053 4.053 26 O -0.555 6.555 27 Si 0.780 3.220 28 C -0.068 4.068 29 C -0.211 4.211 30 H 0.118 0.882 31 H 0.062 0.938 32 H 0.068 0.932 33 H 0.141 0.859 34 H 0.131 0.869 35 H 0.178 0.822 36 H 0.148 0.852 37 H 0.423 0.577 38 H 0.084 0.916 39 H 0.100 0.900 40 H 0.052 0.948 41 H 0.081 0.919 42 H 0.394 0.606 43 H 0.048 0.952 44 H 0.078 0.922 45 H 0.090 0.910 46 H 0.043 0.957 47 H 0.214 0.786 48 H 0.077 0.923 49 H 0.392 0.608 50 H -0.288 1.288 51 H -0.281 1.281 52 H 0.159 0.841 53 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.193 7.983 -6.250 10.630 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.248 6.248 3 C 0.078 3.922 4 C -0.185 4.185 5 C -0.079 4.079 6 C -0.073 4.073 7 C -0.050 4.050 8 N -0.117 5.117 9 N -0.141 5.141 10 C -0.013 4.013 11 C 0.279 3.721 12 O -0.445 6.445 13 N -0.361 5.361 14 C 0.041 3.959 15 H 0.071 0.929 16 C -0.148 4.148 17 C -0.152 4.152 18 C 0.046 3.954 19 H 0.094 0.906 20 O -0.399 6.399 21 C -0.186 4.186 22 C -0.158 4.158 23 C -0.072 4.072 24 C -0.238 4.238 25 C -0.162 4.162 26 O -0.365 6.365 27 Si 0.683 3.317 28 C -0.087 4.087 29 C -0.229 4.229 30 H 0.136 0.864 31 H 0.081 0.919 32 H 0.087 0.913 33 H 0.159 0.841 34 H 0.149 0.851 35 H 0.195 0.805 36 H 0.165 0.835 37 H 0.261 0.739 38 H 0.102 0.898 39 H 0.118 0.882 40 H 0.071 0.929 41 H 0.100 0.900 42 H 0.244 0.756 43 H 0.067 0.933 44 H 0.096 0.904 45 H 0.109 0.891 46 H 0.062 0.938 47 H 0.231 0.769 48 H 0.095 0.905 49 H 0.242 0.758 50 H -0.215 1.215 51 H -0.207 1.207 52 H 0.176 0.824 53 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 4.269 7.224 -4.920 9.727 hybrid contribution -2.343 0.227 0.385 2.385 sum 1.926 7.450 -4.535 8.932 Atomic orbital electron populations 1.23357 0.76389 1.05618 1.02344 1.86054 1.23528 1.26815 1.88380 1.19337 0.92590 0.84784 0.95477 1.20511 0.91858 0.98730 1.07405 1.21081 1.00085 0.90708 0.96019 1.17902 0.93144 0.89394 1.06877 1.20766 0.93393 0.94320 0.96475 1.77675 1.17778 0.94048 1.22170 1.48077 1.19778 1.07293 1.38983 1.22010 0.88348 1.00633 0.90295 1.21196 0.81502 0.78631 0.90806 1.90835 1.40734 1.41798 1.71111 1.45791 1.28992 1.54017 1.07322 1.20916 0.96845 0.98666 0.79440 0.92944 1.21685 0.93848 1.04846 0.94452 1.21451 1.00648 0.98458 0.94682 1.21905 0.93861 0.99267 0.80334 0.90563 1.86487 1.73246 1.61321 1.18835 1.22194 0.98051 1.02291 0.96027 1.21765 0.99396 1.00013 0.94582 1.22741 0.88880 1.00320 0.95218 1.19592 1.00296 0.92932 1.11026 1.24367 0.83432 1.12547 0.95828 1.86518 1.17396 1.95196 1.37433 0.94048 0.86594 0.72546 0.78487 1.21795 0.93419 0.99154 0.94337 1.21406 1.01175 0.91394 1.08963 0.86404 0.91926 0.91324 0.84118 0.85082 0.80491 0.83469 0.73880 0.89751 0.88191 0.92928 0.90049 0.75636 0.93296 0.90351 0.89133 0.93840 0.76922 0.90536 0.75763 1.21468 1.20716 0.82412 0.83093 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 113.37 1.11 1.11 16 2 O -0.33 -2.64 10.49 -92.31 -0.97 -3.61 16 3 C 0.12 1.16 6.69 22.55 0.15 1.31 16 4 C -0.17 -1.65 9.97 22.34 0.22 -1.43 16 5 C -0.06 -0.67 9.74 22.46 0.22 -0.45 16 6 C -0.07 -0.87 5.80 -20.03 -0.12 -0.98 16 7 C 0.12 1.43 6.73 42.52 0.29 1.71 16 8 N -0.30 -3.97 11.63 -48.16 -0.56 -4.53 16 9 N -0.36 -1.61 3.40 -351.93 -1.20 -2.81 16 10 C 0.11 -0.61 6.99 85.64 0.60 -0.02 16 11 C 0.49 1.20 7.83 87.66 0.69 1.88 16 12 O -0.57 -9.09 15.36 -3.04 -0.05 -9.13 16 13 N -0.71 3.34 5.08 -442.53 -2.25 1.09 16 14 C 0.15 -0.09 2.46 44.99 0.11 0.02 16 15 H 0.05 0.41 7.57 -2.39 -0.02 0.39 16 16 C -0.11 0.62 5.39 30.59 0.16 0.78 16 17 C -0.11 0.11 5.57 30.59 0.17 0.28 16 18 C 0.10 -0.12 3.47 30.59 0.11 -0.01 16 19 H 0.08 -0.37 8.14 -2.39 -0.02 -0.39 16 20 O -0.59 -1.36 13.32 -148.98 -1.98 -3.34 16 21 C -0.15 -0.04 5.54 30.58 0.17 0.13 16 22 C -0.12 0.05 5.49 30.58 0.17 0.22 16 23 C 0.07 0.12 9.96 83.47 0.83 0.95 16 24 C -0.23 -1.43 5.37 -19.95 -0.11 -1.53 16 25 C -0.05 -0.07 1.99 71.24 0.14 0.07 16 26 O -0.56 -1.64 10.07 -148.98 -1.50 -3.14 16 27 Si 0.78 -3.07 30.79 68.60 2.11 -0.95 16 28 C -0.07 -0.65 8.94 22.46 0.20 -0.45 16 29 C -0.21 -1.52 9.02 22.33 0.20 -1.32 16 30 H 0.12 -0.48 8.14 -2.39 -0.02 -0.50 16 31 H 0.06 -0.10 7.65 -2.39 -0.02 -0.12 16 32 H 0.07 -0.19 7.66 -2.39 -0.02 -0.21 16 33 H 0.14 1.00 8.06 -2.91 -0.02 0.97 16 34 H 0.13 1.31 8.06 -2.91 -0.02 1.29 16 35 H 0.18 -2.83 8.07 -2.39 -0.02 -2.85 16 36 H 0.15 -1.64 8.14 -2.39 -0.02 -1.66 16 37 H 0.42 -5.74 8.60 -92.71 -0.80 -6.54 16 38 H 0.08 -0.52 8.14 -2.39 -0.02 -0.54 16 39 H 0.10 -1.04 8.14 -2.39 -0.02 -1.06 16 40 H 0.05 0.18 8.14 -2.39 -0.02 0.16 16 41 H 0.08 -0.13 8.14 -2.39 -0.02 -0.14 16 42 H 0.39 -2.16 9.08 -74.06 -0.67 -2.83 16 43 H 0.05 0.26 8.14 -2.39 -0.02 0.24 16 44 H 0.08 -0.14 8.14 -2.39 -0.02 -0.16 16 45 H 0.09 -0.46 8.14 -2.38 -0.02 -0.48 16 46 H 0.04 0.24 8.14 -2.39 -0.02 0.22 16 47 H 0.21 -1.54 6.36 -2.91 -0.02 -1.56 16 48 H 0.08 0.00 7.84 -2.39 -0.02 -0.02 16 49 H 0.39 -2.22 8.74 -74.06 -0.65 -2.87 16 50 H -0.29 -0.18 7.11 99.48 0.71 0.53 16 51 H -0.28 -0.09 7.03 99.48 0.70 0.61 16 52 H 0.16 1.29 4.51 -2.91 -0.01 1.27 16 53 H 0.15 0.27 6.28 -2.91 -0.02 0.25 16 Total: 0.00 -37.96 429.10 -2.19 -40.15 By element: Atomic # 1 Polarization: -14.89 SS G_CDS: -1.11 Total: -16.01 kcal Atomic # 6 Polarization: -3.03 SS G_CDS: 5.32 Total: 2.29 kcal Atomic # 7 Polarization: -2.24 SS G_CDS: -4.00 Total: -6.25 kcal Atomic # 8 Polarization: -14.72 SS G_CDS: -4.50 Total: -19.22 kcal Atomic # 14 Polarization: -3.07 SS G_CDS: 2.11 Total: -0.95 kcal Total: -37.96 -2.19 -40.15 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_12622750.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.465 kcal (2) G-P(sol) polarization free energy of solvation -37.957 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.422 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.188 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.145 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.610 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds