Wall clock time and date at job start Sat Mar 6 2021 14:59:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86310 * 109.46765 * 2 1 4 4 C 1.50703 * 109.47038 * 119.99556 * 2 1 3 5 5 C 1.34832 * 125.65064 * 65.26126 * 4 2 1 6 6 C 1.40795 * 107.04954 * 180.13041 * 5 4 2 7 7 C 1.36109 * 106.73337 * 359.62775 * 6 5 4 8 8 C 1.47569 * 125.94728 * 180.26566 * 7 6 5 9 9 C 1.39922 * 119.95362 * 359.97438 * 8 7 6 10 10 C 1.36426 * 120.27880 * 180.02562 * 9 8 7 11 11 C 1.39873 * 120.18573 * 0.02562 * 10 9 8 12 12 C 1.47293 * 120.04793 * 179.97438 * 11 10 9 13 13 O 1.21620 * 120.00109 * 180.02562 * 12 11 10 14 14 N 1.34780 * 119.99892 * 359.97438 * 12 11 10 15 15 C 1.46499 * 120.00037 * 180.02562 * 14 12 11 16 16 H 1.09001 * 109.47092 * 325.00344 * 15 14 12 17 17 C 1.52998 * 109.46912 * 85.00208 * 15 14 12 18 18 C 1.53006 * 109.47205 * 180.02562 * 17 15 14 19 19 C 1.53001 * 109.46598 * 300.00289 * 18 17 15 20 20 H 1.09001 * 109.47162 * 299.99624 * 19 18 17 21 21 O 1.42902 * 109.47113 * 180.02562 * 19 18 17 22 22 C 1.52998 * 109.47579 * 59.99940 * 19 18 17 23 23 C 1.52996 * 109.47192 * 299.99804 * 22 19 18 24 24 C 1.40409 * 119.90512 * 359.97438 * 11 10 9 25 25 O 1.35686 * 120.13425 * 180.02562 * 24 11 10 26 26 C 1.38274 * 119.72611 * 359.72560 * 24 11 10 27 27 O 1.34226 * 125.65132 * 244.97052 * 4 2 1 28 28 H 0.96692 * 114.00247 * 59.99964 * 1 2 3 29 29 H 1.08997 * 109.47168 * 240.00016 * 2 1 3 30 30 H 1.48489 * 110.00241 * 59.99956 * 3 2 1 31 31 H 1.48502 * 109.99494 * 181.31860 * 3 2 1 32 32 H 1.08005 * 126.47504 * 0.02562 * 5 4 2 33 33 H 1.08002 * 126.63743 * 179.89704 * 6 5 4 34 34 H 1.08003 * 119.85738 * 0.02712 * 9 8 7 35 35 H 1.07994 * 119.90799 * 179.97438 * 10 9 8 36 36 H 0.97003 * 119.99614 * 0.02562 * 14 12 11 37 37 H 1.08996 * 109.47295 * 299.99859 * 17 15 14 38 38 H 1.09001 * 109.47132 * 60.00160 * 17 15 14 39 39 H 1.08995 * 109.47022 * 180.02562 * 18 17 15 40 40 H 1.09001 * 109.47057 * 59.99977 * 18 17 15 41 41 H 0.96701 * 113.99775 * 59.99244 * 21 19 18 42 42 H 1.08996 * 109.47295 * 179.97438 * 22 19 18 43 43 H 1.09001 * 109.47132 * 59.99666 * 22 19 18 44 44 H 1.09001 * 109.46969 * 299.99961 * 23 22 19 45 45 H 1.08999 * 109.47476 * 179.97438 * 23 22 19 46 46 H 0.96693 * 114.00374 * 90.00249 * 25 24 11 47 47 H 1.08001 * 120.09348 * 180.26645 * 26 24 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.7610 -2.0189 1.5071 6 6 2.3803 -2.2627 2.7478 7 6 2.9081 -1.0783 3.1618 8 6 3.6582 -0.8542 4.4127 9 6 3.8791 -1.9175 5.2949 10 6 4.5712 -1.7177 6.4534 11 6 5.0647 -0.4472 6.7676 12 6 5.8111 -0.2347 8.0195 13 8 6.2394 0.8704 8.2921 14 7 6.0186 -1.2649 8.8635 15 6 6.7605 -1.0535 10.1089 16 1 7.5447 -0.3147 9.9438 17 6 5.8050 -0.5495 11.1924 18 6 6.5799 -0.3281 12.4930 19 6 7.2098 -1.6480 12.9422 20 1 6.4258 -2.3870 13.1077 21 8 7.9331 -1.4415 14.1573 22 6 8.1653 -2.1520 11.8588 23 6 7.3905 -2.3734 10.5582 24 6 4.8475 0.6254 5.8879 25 8 5.3246 1.8597 6.1878 26 6 4.1509 0.4172 4.7118 27 8 2.6272 -0.1463 2.2302 28 1 -0.3933 0.4417 -0.7650 29 1 1.7923 -0.5138 -0.8900 30 1 1.5614 2.4680 1.2084 31 1 3.5345 1.7704 -0.0321 32 1 1.2453 -2.7430 0.8937 33 1 2.4311 -3.2077 3.2682 34 1 3.5000 -2.9006 5.0576 35 1 4.7379 -2.5426 7.1302 36 1 5.6766 -2.1463 8.6462 37 1 5.3566 0.3911 10.8725 38 1 5.0208 -1.2883 11.3576 39 1 5.8991 0.0305 13.2649 40 1 7.3639 0.4109 12.3275 41 1 7.3886 -1.1213 14.8895 42 1 8.6144 -3.0921 12.1790 43 1 8.9493 -1.4131 11.6933 44 1 6.6065 -3.1124 10.7237 45 1 8.0712 -2.7321 9.7862 46 1 6.2174 2.0275 5.8567 47 1 3.9841 1.2371 4.0288 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_12807986.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:59:58 Heat of formation + Delta-G solvation = -114.510882 kcal Electronic energy + Delta-G solvation = -31335.555886 eV Core-core repulsion = 26837.672894 eV Total energy + Delta-G solvation = -4497.882993 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.150 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -43.77934 -41.65748 -40.41991 -39.18890 -38.07846 -37.84270 -36.90567 -34.69476 -34.23656 -33.35842 -31.95150 -31.41332 -30.72368 -29.28733 -26.97841 -24.60857 -24.13232 -23.92926 -23.25869 -22.36079 -21.74824 -21.32598 -21.07534 -19.69583 -18.77209 -18.75693 -18.23339 -18.02241 -17.59919 -17.08343 -16.64984 -16.58006 -16.33822 -16.05938 -15.89261 -15.66050 -15.53680 -15.43113 -14.84136 -14.70283 -14.53094 -14.34390 -14.15653 -14.10955 -13.94657 -13.63897 -13.54714 -13.39887 -13.31351 -13.04028 -12.79067 -12.72451 -12.47415 -12.25042 -12.11059 -11.89137 -11.78569 -11.35558 -11.16520 -10.87545 -10.74150 -10.73115 -10.52248 -10.10386 -10.00050 -9.04758 -5.15198 -0.82508 0.06655 0.60574 1.07816 1.34743 1.52096 1.62456 1.95470 1.97752 2.01395 2.60706 2.96084 3.14325 3.18452 3.46405 3.49148 3.56280 3.63347 3.63947 3.72973 3.86343 3.90139 3.94641 4.04549 4.10078 4.12222 4.18464 4.20787 4.32475 4.33257 4.36903 4.52606 4.57775 4.63178 4.73016 4.76410 4.78622 4.89241 4.94720 4.95658 5.02444 5.04335 5.06201 5.12498 5.19705 5.27204 5.34783 5.40899 5.45546 5.93830 6.40412 6.42550 6.65133 6.66478 7.20161 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.036 4.036 3 Si 0.706 3.294 4 C -0.002 4.002 5 C -0.168 4.168 6 C -0.175 4.175 7 C 0.021 3.979 8 C 0.031 3.969 9 C -0.116 4.116 10 C -0.063 4.063 11 C -0.165 4.165 12 C 0.560 3.440 13 O -0.516 6.516 14 N -0.726 5.726 15 C 0.144 3.856 16 H 0.092 0.908 17 C -0.128 4.128 18 C -0.150 4.150 19 C 0.103 3.897 20 H 0.056 0.944 21 O -0.568 6.568 22 C -0.110 4.110 23 C -0.124 4.124 24 C 0.179 3.821 25 O -0.474 6.474 26 C -0.143 4.143 27 O -0.169 6.169 28 H 0.391 0.609 29 H 0.096 0.904 30 H -0.248 1.248 31 H -0.252 1.252 32 H 0.158 0.842 33 H 0.159 0.841 34 H 0.140 0.860 35 H 0.137 0.863 36 H 0.398 0.602 37 H 0.073 0.927 38 H 0.066 0.934 39 H 0.069 0.931 40 H 0.075 0.925 41 H 0.380 0.620 42 H 0.077 0.923 43 H 0.074 0.926 44 H 0.071 0.929 45 H 0.078 0.922 46 H 0.399 0.601 47 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.626 -4.254 -4.534 6.426 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.145 4.145 3 Si 0.605 3.395 4 C -0.052 4.052 5 C -0.187 4.187 6 C -0.194 4.194 7 C -0.028 4.028 8 C 0.030 3.970 9 C -0.134 4.134 10 C -0.082 4.082 11 C -0.169 4.169 12 C 0.347 3.653 13 O -0.392 6.392 14 N -0.378 5.378 15 C 0.040 3.960 16 H 0.110 0.890 17 C -0.166 4.166 18 C -0.188 4.188 19 C 0.044 3.956 20 H 0.074 0.926 21 O -0.374 6.374 22 C -0.148 4.148 23 C -0.162 4.162 24 C 0.133 3.867 25 O -0.285 6.285 26 C -0.161 4.161 27 O -0.066 6.066 28 H 0.240 0.760 29 H 0.114 0.886 30 H -0.172 1.172 31 H -0.177 1.177 32 H 0.176 0.824 33 H 0.177 0.823 34 H 0.158 0.842 35 H 0.155 0.845 36 H 0.234 0.766 37 H 0.092 0.908 38 H 0.085 0.915 39 H 0.088 0.912 40 H 0.093 0.907 41 H 0.227 0.773 42 H 0.095 0.905 43 H 0.093 0.907 44 H 0.090 0.910 45 H 0.096 0.904 46 H 0.257 0.743 47 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -0.673 -2.978 -3.432 4.593 hybrid contribution -0.426 -1.051 0.121 1.140 sum -1.099 -4.028 -3.312 5.329 Atomic orbital electron populations 1.86465 1.16305 1.81992 1.50273 1.23796 0.86209 1.11709 0.92811 0.95271 0.80989 0.76219 0.87037 1.21462 1.00183 0.92622 0.90936 1.21555 1.03626 0.95607 0.97945 1.21911 1.01864 0.98336 0.97260 1.20357 1.04085 0.87599 0.90785 1.17763 0.95418 0.93784 0.90008 1.20703 1.00203 0.98695 0.93752 1.20818 0.95492 0.95505 0.96399 1.20495 1.04664 0.94271 0.97458 1.17958 0.79709 0.84573 0.83060 1.90848 1.49637 1.23319 1.75377 1.45980 1.57998 1.12206 1.21606 1.21048 0.94144 0.98049 0.82731 0.88953 1.21870 0.98209 1.02357 0.94207 1.22238 1.00416 0.98622 0.97517 1.21849 0.93448 0.95420 0.84879 0.92621 1.86516 1.40145 1.89385 1.21343 1.21398 0.98107 1.02636 0.92629 1.21771 1.00258 0.96551 0.97600 1.18273 0.93865 0.84138 0.90463 1.84776 1.36347 1.27580 1.79828 1.21573 1.00484 0.97066 0.96990 1.83961 1.58008 1.38135 1.26545 0.75997 0.88590 1.17232 1.17656 0.82440 0.82350 0.84240 0.84492 0.76627 0.90828 0.91541 0.91228 0.90667 0.77279 0.90464 0.90693 0.90987 0.90357 0.74259 0.84218 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.24 12.86 -35.23 -0.45 -0.21 16 2 C -0.04 0.02 2.98 36.01 0.11 0.12 16 3 Si 0.71 -0.59 32.11 -169.99 -5.46 -6.05 16 4 C 0.00 -0.01 6.24 -35.51 -0.22 -0.23 16 5 C -0.17 -0.31 10.78 -39.82 -0.43 -0.74 16 6 C -0.17 -0.24 10.26 -39.38 -0.40 -0.64 16 7 C 0.02 0.06 7.02 -36.54 -0.26 -0.20 16 8 C 0.03 0.06 5.87 -104.95 -0.62 -0.56 16 9 C -0.12 0.07 9.48 -39.60 -0.38 -0.30 16 10 C -0.06 0.07 9.47 -39.62 -0.38 -0.31 16 11 C -0.17 -0.28 5.89 -104.79 -0.62 -0.90 16 12 C 0.56 1.52 7.72 -12.58 -0.10 1.42 16 13 O -0.52 -3.27 14.80 -16.69 -0.25 -3.52 16 14 N -0.73 0.33 5.03 -54.92 -0.28 0.05 16 15 C 0.14 -0.03 2.45 -67.93 -0.17 -0.19 16 16 H 0.09 0.18 7.58 -51.93 -0.39 -0.22 16 17 C -0.13 -0.01 5.49 -26.73 -0.15 -0.16 16 18 C -0.15 0.05 5.55 -26.73 -0.15 -0.10 16 19 C 0.10 -0.04 3.47 -26.73 -0.09 -0.13 16 20 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 21 O -0.57 -0.55 13.32 -35.23 -0.47 -1.02 16 22 C -0.11 0.07 5.57 -26.73 -0.15 -0.08 16 23 C -0.12 0.25 5.39 -26.73 -0.14 0.11 16 24 C 0.18 0.51 6.71 -38.75 -0.26 0.25 16 25 O -0.47 -1.68 11.56 -40.72 -0.47 -2.15 16 26 C -0.14 -0.36 9.65 -39.06 -0.38 -0.74 16 27 O -0.17 -0.71 8.79 4.72 0.04 -0.67 16 28 H 0.39 -2.33 8.74 45.56 0.40 -1.94 16 29 H 0.10 -0.29 7.96 -51.93 -0.41 -0.71 16 30 H -0.25 -0.81 7.11 56.52 0.40 -0.41 16 31 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 32 H 0.16 -0.01 8.06 -52.48 -0.42 -0.43 16 33 H 0.16 -0.25 7.24 -52.49 -0.38 -0.63 16 34 H 0.14 -0.44 6.95 -52.48 -0.36 -0.80 16 35 H 0.14 -0.61 6.37 -52.49 -0.33 -0.94 16 36 H 0.40 -1.31 6.61 -40.82 -0.27 -1.58 16 37 H 0.07 0.17 8.14 -51.93 -0.42 -0.25 16 38 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 39 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 40 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 41 H 0.38 -1.06 9.08 45.56 0.41 -0.65 16 42 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 43 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 44 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 45 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 46 H 0.40 -0.12 9.06 45.56 0.41 0.29 16 47 H 0.14 0.36 7.90 -52.49 -0.41 -0.06 16 LS Contribution 391.50 15.07 5.90 5.90 Total: 0.00 -12.42 391.50 -10.97 -23.39 By element: Atomic # 1 Polarization: -7.59 SS G_CDS: -4.77 Total: -12.36 kcal Atomic # 6 Polarization: 1.40 SS G_CDS: -4.77 Total: -3.37 kcal Atomic # 7 Polarization: 0.33 SS G_CDS: -0.28 Total: 0.05 kcal Atomic # 8 Polarization: -5.97 SS G_CDS: -1.60 Total: -7.57 kcal Atomic # 14 Polarization: -0.59 SS G_CDS: -5.46 Total: -6.05 kcal Total LS contribution 5.90 Total: 5.90 kcal Total: -12.42 -10.97 -23.39 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_12807986.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.117 kcal (2) G-P(sol) polarization free energy of solvation -12.420 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.537 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.974 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.394 kcal (6) G-S(sol) free energy of system = (1) + (5) -114.511 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds