Wall clock time and date at job start Sat Mar 6 2021 14:59:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86310 * 109.46765 * 2 1 4 4 C 1.50703 * 109.47038 * 119.99556 * 2 1 3 5 5 C 1.34832 * 125.65064 * 65.26126 * 4 2 1 6 6 C 1.40795 * 107.04954 * 180.13041 * 5 4 2 7 7 C 1.36109 * 106.73337 * 359.62775 * 6 5 4 8 8 C 1.47569 * 125.94728 * 180.26566 * 7 6 5 9 9 C 1.39922 * 119.95362 * 359.97438 * 8 7 6 10 10 C 1.36426 * 120.27880 * 180.02562 * 9 8 7 11 11 C 1.39873 * 120.18573 * 0.02562 * 10 9 8 12 12 C 1.47293 * 120.04793 * 179.97438 * 11 10 9 13 13 O 1.21620 * 120.00109 * 180.02562 * 12 11 10 14 14 N 1.34780 * 119.99892 * 359.97438 * 12 11 10 15 15 C 1.46499 * 120.00037 * 180.02562 * 14 12 11 16 16 H 1.09001 * 109.47092 * 325.00344 * 15 14 12 17 17 C 1.52998 * 109.46912 * 85.00208 * 15 14 12 18 18 C 1.53006 * 109.47205 * 180.02562 * 17 15 14 19 19 C 1.53001 * 109.46598 * 300.00289 * 18 17 15 20 20 H 1.09001 * 109.47162 * 299.99624 * 19 18 17 21 21 O 1.42902 * 109.47113 * 180.02562 * 19 18 17 22 22 C 1.52998 * 109.47579 * 59.99940 * 19 18 17 23 23 C 1.52996 * 109.47192 * 299.99804 * 22 19 18 24 24 C 1.40409 * 119.90512 * 359.97438 * 11 10 9 25 25 O 1.35686 * 120.13425 * 180.02562 * 24 11 10 26 26 C 1.38274 * 119.72611 * 359.72560 * 24 11 10 27 27 O 1.34226 * 125.65132 * 244.97052 * 4 2 1 28 28 H 0.96692 * 114.00247 * 59.99964 * 1 2 3 29 29 H 1.08997 * 109.47168 * 240.00016 * 2 1 3 30 30 H 1.48489 * 110.00241 * 59.99956 * 3 2 1 31 31 H 1.48502 * 109.99494 * 181.31860 * 3 2 1 32 32 H 1.08005 * 126.47504 * 0.02562 * 5 4 2 33 33 H 1.08002 * 126.63743 * 179.89704 * 6 5 4 34 34 H 1.08003 * 119.85738 * 0.02712 * 9 8 7 35 35 H 1.07994 * 119.90799 * 179.97438 * 10 9 8 36 36 H 0.97003 * 119.99614 * 0.02562 * 14 12 11 37 37 H 1.08996 * 109.47295 * 299.99859 * 17 15 14 38 38 H 1.09001 * 109.47132 * 60.00160 * 17 15 14 39 39 H 1.08995 * 109.47022 * 180.02562 * 18 17 15 40 40 H 1.09001 * 109.47057 * 59.99977 * 18 17 15 41 41 H 0.96701 * 113.99775 * 59.99244 * 21 19 18 42 42 H 1.08996 * 109.47295 * 179.97438 * 22 19 18 43 43 H 1.09001 * 109.47132 * 59.99666 * 22 19 18 44 44 H 1.09001 * 109.46969 * 299.99961 * 23 22 19 45 45 H 1.08999 * 109.47476 * 179.97438 * 23 22 19 46 46 H 0.96693 * 114.00374 * 90.00249 * 25 24 11 47 47 H 1.08001 * 120.09348 * 180.26645 * 26 24 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.7610 -2.0189 1.5071 6 6 2.3803 -2.2627 2.7478 7 6 2.9081 -1.0783 3.1618 8 6 3.6582 -0.8542 4.4127 9 6 3.8791 -1.9175 5.2949 10 6 4.5712 -1.7177 6.4534 11 6 5.0647 -0.4472 6.7676 12 6 5.8111 -0.2347 8.0195 13 8 6.2394 0.8704 8.2921 14 7 6.0186 -1.2649 8.8635 15 6 6.7605 -1.0535 10.1089 16 1 7.5447 -0.3147 9.9438 17 6 5.8050 -0.5495 11.1924 18 6 6.5799 -0.3281 12.4930 19 6 7.2098 -1.6480 12.9422 20 1 6.4258 -2.3870 13.1077 21 8 7.9331 -1.4415 14.1573 22 6 8.1653 -2.1520 11.8588 23 6 7.3905 -2.3734 10.5582 24 6 4.8475 0.6254 5.8879 25 8 5.3246 1.8597 6.1878 26 6 4.1509 0.4172 4.7118 27 8 2.6272 -0.1463 2.2302 28 1 -0.3933 0.4417 -0.7650 29 1 1.7923 -0.5138 -0.8900 30 1 1.5614 2.4680 1.2084 31 1 3.5345 1.7704 -0.0321 32 1 1.2453 -2.7430 0.8937 33 1 2.4311 -3.2077 3.2682 34 1 3.5000 -2.9006 5.0576 35 1 4.7379 -2.5426 7.1302 36 1 5.6766 -2.1463 8.6462 37 1 5.3566 0.3911 10.8725 38 1 5.0208 -1.2883 11.3576 39 1 5.8991 0.0305 13.2649 40 1 7.3639 0.4109 12.3275 41 1 7.3886 -1.1213 14.8895 42 1 8.6144 -3.0921 12.1790 43 1 8.9493 -1.4131 11.6933 44 1 6.6065 -3.1124 10.7237 45 1 8.0712 -2.7321 9.7862 46 1 6.2174 2.0275 5.8567 47 1 3.9841 1.2371 4.0288 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11353598_12807986.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 14:59:56 Heat of formation + Delta-G solvation = -120.202719 kcal Electronic energy + Delta-G solvation = -31335.802703 eV Core-core repulsion = 26837.672894 eV Total energy + Delta-G solvation = -4498.129809 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.150 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -43.88719 -41.77235 -40.45594 -39.29066 -38.13476 -37.84472 -36.97160 -34.81063 -34.33578 -33.40007 -31.90972 -31.48647 -30.76916 -29.30160 -27.00940 -24.67090 -24.17432 -23.89717 -23.27877 -22.44933 -21.85532 -21.40531 -21.08526 -19.79913 -18.83377 -18.70322 -18.22380 -18.12271 -17.68245 -17.20084 -16.71280 -16.64183 -16.43001 -16.15167 -15.89170 -15.70085 -15.56864 -15.50840 -14.84126 -14.75256 -14.54017 -14.39336 -14.23475 -14.17690 -14.01177 -13.69392 -13.61961 -13.38329 -13.28833 -13.02141 -12.83235 -12.74764 -12.47882 -12.28129 -12.21729 -12.02227 -11.77367 -11.32048 -11.26017 -11.02234 -10.81921 -10.78285 -10.46983 -10.18202 -10.07739 -9.13059 -5.16056 -0.91365 0.01696 0.50877 1.10848 1.29514 1.48408 1.57614 1.82500 1.94987 1.95223 2.53373 2.88997 3.17613 3.24533 3.47091 3.51904 3.61058 3.67843 3.68608 3.70524 3.87874 3.88772 3.98663 4.05972 4.10945 4.18525 4.24596 4.26892 4.33435 4.36537 4.40208 4.52670 4.57139 4.61899 4.68330 4.78222 4.85528 4.90680 4.95252 4.98525 4.99401 5.06372 5.09123 5.09785 5.21857 5.27866 5.33525 5.40419 5.44343 5.84431 6.42342 6.56608 6.80250 6.84172 7.11115 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.035 4.035 3 Si 0.799 3.201 4 C -0.031 4.031 5 C -0.174 4.174 6 C -0.166 4.166 7 C -0.006 4.006 8 C 0.023 3.977 9 C -0.106 4.106 10 C -0.046 4.046 11 C -0.177 4.177 12 C 0.557 3.443 13 O -0.563 6.563 14 N -0.707 5.707 15 C 0.145 3.855 16 H 0.064 0.936 17 C -0.123 4.123 18 C -0.145 4.145 19 C 0.104 3.896 20 H 0.073 0.927 21 O -0.589 6.589 22 C -0.112 4.112 23 C -0.112 4.112 24 C 0.160 3.840 25 O -0.496 6.496 26 C -0.162 4.162 27 O -0.198 6.198 28 H 0.414 0.586 29 H 0.131 0.869 30 H -0.313 1.313 31 H -0.295 1.295 32 H 0.178 0.822 33 H 0.192 0.808 34 H 0.175 0.825 35 H 0.180 0.820 36 H 0.416 0.584 37 H 0.044 0.956 38 H 0.085 0.915 39 H 0.077 0.923 40 H 0.054 0.946 41 H 0.394 0.606 42 H 0.081 0.919 43 H 0.057 0.943 44 H 0.096 0.904 45 H 0.087 0.913 46 H 0.408 0.592 47 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.733 -8.020 -4.827 9.752 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.144 4.144 3 Si 0.706 3.294 4 C -0.080 4.080 5 C -0.193 4.193 6 C -0.184 4.184 7 C -0.055 4.055 8 C 0.022 3.978 9 C -0.124 4.124 10 C -0.064 4.064 11 C -0.180 4.180 12 C 0.345 3.655 13 O -0.443 6.443 14 N -0.359 5.359 15 C 0.041 3.959 16 H 0.082 0.918 17 C -0.161 4.161 18 C -0.184 4.184 19 C 0.045 3.955 20 H 0.091 0.909 21 O -0.398 6.398 22 C -0.150 4.150 23 C -0.150 4.150 24 C 0.114 3.886 25 O -0.309 6.309 26 C -0.180 4.180 27 O -0.097 6.097 28 H 0.267 0.733 29 H 0.148 0.852 30 H -0.242 1.242 31 H -0.223 1.223 32 H 0.195 0.805 33 H 0.209 0.791 34 H 0.193 0.807 35 H 0.197 0.803 36 H 0.255 0.745 37 H 0.063 0.937 38 H 0.103 0.897 39 H 0.096 0.904 40 H 0.073 0.927 41 H 0.243 0.757 42 H 0.100 0.900 43 H 0.076 0.924 44 H 0.115 0.885 45 H 0.105 0.895 46 H 0.268 0.732 47 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges -1.809 -6.785 -3.760 7.966 hybrid contribution -0.080 0.169 0.259 0.319 sum -1.889 -6.616 -3.501 7.720 Atomic orbital electron populations 1.86411 1.16043 1.82504 1.52180 1.23902 0.86515 1.11174 0.92845 0.94474 0.76969 0.74294 0.83643 1.22228 1.00459 0.93773 0.91578 1.21917 1.03481 0.95533 0.98395 1.22333 1.00300 0.98820 0.96960 1.20757 1.05303 0.88194 0.91216 1.18015 0.95312 0.94044 0.90397 1.21095 0.99185 0.99265 0.92849 1.21242 0.93456 0.95140 0.96591 1.20542 1.05407 0.95223 0.96876 1.18185 0.79300 0.84448 0.83578 1.90826 1.51695 1.25314 1.76441 1.45811 1.56995 1.12322 1.20806 1.21013 0.93509 0.98723 0.82697 0.91778 1.21806 0.98585 1.01449 0.94292 1.22189 0.99954 0.98604 0.97630 1.21910 0.93720 0.95317 0.84534 0.90904 1.86482 1.41456 1.89563 1.22290 1.21433 0.97968 1.02261 0.93384 1.21702 1.00777 0.95550 0.96949 1.18472 0.94636 0.84333 0.91152 1.84728 1.37303 1.28648 1.80218 1.21490 1.01891 0.97573 0.97084 1.83956 1.58812 1.39454 1.27477 0.73289 0.85202 1.24173 1.22277 0.80487 0.79125 0.80731 0.80277 0.74516 0.93667 0.89673 0.90433 0.92678 0.75657 0.90043 0.92421 0.88546 0.89462 0.73192 0.85935 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.97 12.86 -148.98 -1.92 -0.95 16 2 C -0.03 0.04 2.98 71.24 0.21 0.25 16 3 Si 0.80 -0.04 32.11 68.60 2.20 2.16 16 4 C -0.03 -0.18 6.24 24.90 0.16 -0.03 16 5 C -0.17 -0.46 10.78 22.11 0.24 -0.22 16 6 C -0.17 -0.22 10.26 22.40 0.23 0.01 16 7 C -0.01 -0.04 7.02 24.24 0.17 0.13 16 8 C 0.02 0.10 5.87 -20.08 -0.12 -0.02 16 9 C -0.11 0.34 9.48 22.25 0.21 0.55 16 10 C -0.05 0.19 9.47 22.24 0.21 0.40 16 11 C -0.18 -0.70 5.89 -19.97 -0.12 -0.82 16 12 C 0.56 3.59 7.72 86.62 0.67 4.26 16 13 O -0.56 -8.76 14.80 16.90 0.25 -8.51 16 14 N -0.71 1.12 5.03 -445.92 -2.24 -1.12 16 15 C 0.15 -0.03 2.45 44.99 0.11 0.08 16 16 H 0.06 0.38 7.58 -2.39 -0.02 0.36 16 17 C -0.12 -0.06 5.49 30.60 0.17 0.11 16 18 C -0.15 0.00 5.55 30.60 0.17 0.17 16 19 C 0.10 -0.14 3.47 30.59 0.11 -0.03 16 20 H 0.07 -0.33 8.14 -2.39 -0.02 -0.34 16 21 O -0.59 -1.06 13.32 -148.98 -1.98 -3.05 16 22 C -0.11 0.19 5.57 30.59 0.17 0.36 16 23 C -0.11 0.63 5.39 30.59 0.16 0.79 16 24 C 0.16 1.35 6.71 22.81 0.15 1.50 16 25 O -0.50 -5.44 11.56 -69.06 -0.80 -6.24 16 26 C -0.16 -1.29 9.65 22.61 0.22 -1.07 16 27 O -0.20 -2.06 8.79 -6.02 -0.05 -2.11 16 28 H 0.41 -5.51 8.74 -74.06 -0.65 -6.15 16 29 H 0.13 -1.04 7.96 -2.39 -0.02 -1.06 16 30 H -0.31 -3.31 7.11 99.48 0.71 -2.60 16 31 H -0.30 -1.99 7.11 99.48 0.71 -1.28 16 32 H 0.18 -0.38 8.06 -2.91 -0.02 -0.41 16 33 H 0.19 -1.25 7.24 -2.91 -0.02 -1.27 16 34 H 0.18 -1.82 6.95 -2.91 -0.02 -1.84 16 35 H 0.18 -2.38 6.37 -2.91 -0.02 -2.39 16 36 H 0.42 -3.87 6.61 -92.71 -0.61 -4.48 16 37 H 0.04 0.30 8.14 -2.39 -0.02 0.28 16 38 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 39 H 0.08 -0.14 8.14 -2.39 -0.02 -0.16 16 40 H 0.05 0.22 8.14 -2.39 -0.02 0.20 16 41 H 0.39 -2.28 9.08 -74.06 -0.67 -2.95 16 42 H 0.08 -0.18 8.14 -2.39 -0.02 -0.20 16 43 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 44 H 0.10 -0.94 8.14 -2.39 -0.02 -0.96 16 45 H 0.09 -0.59 8.14 -2.39 -0.02 -0.61 16 46 H 0.41 1.49 9.06 -74.06 -0.67 0.82 16 47 H 0.12 1.23 7.90 -2.91 -0.02 1.21 16 Total: 0.00 -34.50 391.50 -2.93 -37.43 By element: Atomic # 1 Polarization: -22.53 SS G_CDS: -1.51 Total: -24.04 kcal Atomic # 6 Polarization: 3.31 SS G_CDS: 3.12 Total: 6.43 kcal Atomic # 7 Polarization: 1.12 SS G_CDS: -2.24 Total: -1.12 kcal Atomic # 8 Polarization: -16.36 SS G_CDS: -4.50 Total: -20.86 kcal Atomic # 14 Polarization: -0.04 SS G_CDS: 2.20 Total: 2.16 kcal Total: -34.50 -2.93 -37.43 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_12807986.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.774 kcal (2) G-P(sol) polarization free energy of solvation -34.502 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.276 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.926 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.428 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.203 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds