Wall clock time and date at job start Sat Mar 6 2021 15:00:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50709 * 1 3 3 C 1.39277 * 121.02937 * 2 1 4 4 C 1.46497 * 134.20098 * 0.02562 * 3 2 1 5 5 C 1.50707 * 126.59644 * 359.97438 * 4 3 2 6 6 O 1.42894 * 109.47267 * 284.71104 * 5 4 3 7 7 Si 1.86302 * 109.46969 * 164.71375 * 5 4 3 8 8 C 1.34177 * 106.80385 * 179.71880 * 4 3 2 9 9 N 1.36944 * 109.95159 * 0.25820 * 8 4 3 10 10 C 1.37149 * 110.11671 * 0.02562 * 9 8 4 11 11 N 1.32820 * 132.97266 * 180.02562 * 10 9 8 12 12 C 1.31317 * 121.89070 * 179.17119 * 11 10 9 13 13 C 1.39748 * 121.02976 * 179.97438 * 2 1 3 14 14 C 1.47667 * 120.45510 * 0.02562 * 13 2 1 15 15 O 1.21569 * 119.99896 * 5.98403 * 14 13 2 16 16 N 1.34776 * 119.99786 * 185.98866 * 14 13 2 17 17 C 1.46498 * 119.99950 * 180.02562 * 16 14 13 18 18 H 1.08997 * 109.47489 * 34.99422 * 17 16 14 19 19 C 1.53000 * 109.47182 * 154.99751 * 17 16 14 20 20 C 1.53004 * 109.46923 * 179.97438 * 19 17 16 21 21 C 1.52997 * 109.47488 * 300.00007 * 20 19 17 22 22 H 1.08997 * 109.47014 * 300.00113 * 21 20 19 23 23 O 1.42903 * 109.47053 * 179.97438 * 21 20 19 24 24 C 1.53000 * 109.47044 * 60.00067 * 21 20 19 25 25 C 1.52998 * 109.47151 * 300.00056 * 24 21 20 26 26 H 1.08997 * 109.47125 * 96.28683 * 1 2 3 27 27 H 1.09002 * 109.46909 * 216.28743 * 1 2 3 28 28 H 1.09001 * 109.46808 * 336.27995 * 1 2 3 29 29 H 1.09003 * 109.47014 * 44.71520 * 5 4 3 30 30 H 0.96696 * 114.00404 * 300.00324 * 6 5 4 31 31 H 1.48498 * 109.99701 * 180.02562 * 7 5 4 32 32 H 1.48503 * 109.99972 * 301.32014 * 7 5 4 33 33 H 1.08005 * 125.02034 * 180.29721 * 8 4 3 34 34 H 0.97002 * 124.94037 * 179.97438 * 9 8 4 35 35 H 1.07997 * 119.31011 * 180.26861 * 12 11 10 36 36 H 0.97003 * 120.00244 * 359.97438 * 16 14 13 37 37 H 1.08996 * 109.47567 * 299.99844 * 19 17 16 38 38 H 1.09001 * 109.47392 * 60.00194 * 19 17 16 39 39 H 1.09005 * 109.46962 * 60.00680 * 20 19 17 40 40 H 1.08997 * 109.47211 * 179.97438 * 20 19 17 41 41 H 0.96701 * 113.99870 * 180.02562 * 23 21 20 42 42 H 1.08997 * 109.46964 * 59.99636 * 24 21 20 43 43 H 1.08997 * 109.47043 * 179.97438 * 24 21 20 44 44 H 1.08997 * 109.47154 * 300.00104 * 25 24 21 45 45 H 1.08997 * 109.47439 * 180.02562 * 25 24 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8516 2.6100 0.0005 5 6 0.4525 3.1704 0.0006 6 8 -0.1168 3.0303 -1.3025 7 14 0.5060 4.9740 0.4643 8 6 2.9947 3.3126 0.0065 9 7 4.0668 2.4605 0.0041 10 6 3.6349 1.1589 -0.0043 11 7 4.2721 -0.0065 -0.0090 12 6 3.6267 -1.1501 -0.0009 13 6 2.2275 -1.1975 0.0005 14 6 1.5225 -2.4950 0.0005 15 8 0.3123 -2.5293 -0.1097 16 7 2.2208 -3.6413 0.1228 17 6 1.5215 -4.9286 0.1223 18 1 0.6669 -4.8776 -0.5523 19 6 2.4768 -6.0277 -0.3470 20 6 1.7466 -7.3723 -0.3469 21 6 1.2610 -7.6889 1.0690 22 1 2.1158 -7.7397 1.7434 23 8 0.5785 -8.9444 1.0688 24 6 0.3057 -6.5898 1.5382 25 6 1.0359 -5.2453 1.5382 26 1 -0.3633 -0.1125 -1.0215 27 1 -0.3633 -0.8284 0.6082 28 1 -0.3633 0.9409 0.4134 29 1 -0.1563 2.6273 0.7234 30 1 0.3743 3.4892 -1.9977 31 1 -0.8676 5.5381 0.4686 32 1 1.1253 5.1357 1.8043 33 1 3.0596 4.3906 0.0130 34 1 4.9965 2.7374 0.0071 35 1 4.1870 -2.0733 -0.0008 36 1 3.1865 -3.6140 0.2105 37 1 2.8231 -5.8020 -1.3555 38 1 3.3314 -6.0788 0.3277 39 1 0.8919 -7.3215 -1.0214 40 1 2.4270 -8.1553 -0.6816 41 1 0.2421 -9.2093 1.9359 42 1 -0.5490 -6.5390 0.8638 43 1 -0.0406 -6.8156 2.5467 44 1 1.8906 -5.2960 2.2126 45 1 0.3555 -4.4623 1.8730 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11353598_12890568.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 15:00:02 Heat of formation + Delta-G solvation = -48.663231 kcal Electronic energy + Delta-G solvation = -28716.137969 eV Core-core repulsion = 24700.311428 eV Total energy + Delta-G solvation = -4015.826541 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.157 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -42.84750 -41.17768 -39.78166 -38.64573 -37.75461 -36.98881 -35.04570 -34.44332 -31.96721 -31.90399 -31.27845 -29.30621 -28.59378 -26.47708 -24.77347 -24.05724 -23.89469 -22.96228 -21.62298 -21.07887 -20.63820 -19.27173 -18.78281 -18.21312 -17.76391 -17.54901 -17.11261 -16.64502 -16.55937 -16.18875 -15.94139 -15.55997 -15.54825 -15.40917 -15.01468 -14.76365 -14.63492 -14.26102 -14.11737 -13.81229 -13.75998 -13.54872 -13.36172 -13.27325 -13.24726 -13.02991 -12.95230 -12.40902 -12.25801 -12.21055 -12.02531 -11.76724 -11.32939 -11.12175 -11.01636 -10.79831 -10.40620 -10.17678 -10.06745 -9.58819 -9.13293 -5.13825 -0.22361 -0.05538 1.22886 1.37219 1.56057 1.64156 1.93814 1.94266 2.08194 2.85593 3.17351 3.27938 3.43672 3.52153 3.56296 3.61529 3.66947 3.72792 3.79488 3.97621 4.06627 4.11320 4.15546 4.22718 4.25023 4.28053 4.36031 4.38473 4.43231 4.60514 4.65415 4.78640 4.80214 4.93661 4.98278 4.99967 5.05335 5.06336 5.09033 5.19976 5.21626 5.30133 5.38002 5.46673 5.58323 5.77661 6.09479 6.49030 6.61126 6.68787 6.85325 7.26417 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 C 0.085 3.915 3 C -0.150 4.150 4 C -0.181 4.181 5 C -0.036 4.036 6 O -0.537 6.537 7 Si 0.686 3.314 8 C 0.069 3.931 9 N -0.570 5.570 10 C 0.308 3.692 11 N -0.504 5.504 12 C 0.181 3.819 13 C -0.234 4.234 14 C 0.572 3.428 15 O -0.528 6.528 16 N -0.726 5.726 17 C 0.145 3.855 18 H 0.093 0.907 19 C -0.124 4.124 20 C -0.110 4.110 21 C 0.103 3.897 22 H 0.056 0.944 23 O -0.568 6.568 24 C -0.150 4.150 25 C -0.127 4.127 26 H 0.088 0.912 27 H 0.096 0.904 28 H 0.067 0.933 29 H 0.116 0.884 30 H 0.378 0.622 31 H -0.253 1.253 32 H -0.255 1.255 33 H 0.186 0.814 34 H 0.426 0.574 35 H 0.162 0.838 36 H 0.398 0.602 37 H 0.078 0.922 38 H 0.072 0.928 39 H 0.074 0.926 40 H 0.076 0.924 41 H 0.379 0.621 42 H 0.075 0.925 43 H 0.068 0.932 44 H 0.066 0.934 45 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.688 3.116 0.428 5.646 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.076 3.924 3 C -0.157 4.157 4 C -0.188 4.188 5 C -0.147 4.147 6 O -0.342 6.342 7 Si 0.587 3.413 8 C -0.057 4.057 9 N -0.176 5.176 10 C 0.074 3.926 11 N -0.217 5.217 12 C 0.012 3.988 13 C -0.242 4.242 14 C 0.360 3.640 15 O -0.405 6.405 16 N -0.377 5.377 17 C 0.041 3.959 18 H 0.111 0.889 19 C -0.163 4.163 20 C -0.148 4.148 21 C 0.044 3.956 22 H 0.074 0.926 23 O -0.374 6.374 24 C -0.188 4.188 25 C -0.166 4.166 26 H 0.106 0.894 27 H 0.114 0.886 28 H 0.086 0.914 29 H 0.133 0.867 30 H 0.225 0.775 31 H -0.177 1.177 32 H -0.180 1.180 33 H 0.203 0.797 34 H 0.264 0.736 35 H 0.179 0.821 36 H 0.233 0.767 37 H 0.097 0.903 38 H 0.090 0.910 39 H 0.093 0.907 40 H 0.095 0.905 41 H 0.227 0.773 42 H 0.093 0.907 43 H 0.087 0.913 44 H 0.084 0.916 45 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 4.292 3.556 0.605 5.607 hybrid contribution 0.133 -0.453 0.916 1.030 sum 4.425 3.104 1.522 5.615 Atomic orbital electron populations 1.21173 0.88751 1.03499 1.04411 1.19928 0.97139 0.89208 0.86107 1.19475 0.92819 0.93568 1.09805 1.20687 0.95354 0.91088 1.11716 1.24519 0.90420 1.10575 0.89219 1.86533 1.53627 1.77819 1.16199 0.95320 0.84450 0.76770 0.84787 1.21724 0.84973 0.95790 1.03212 1.41508 1.09614 1.02702 1.63730 1.18494 0.89329 0.85901 0.98832 1.66439 1.40567 0.96015 1.18712 1.22508 0.90086 0.94439 0.91786 1.20437 0.94761 0.93762 1.15196 1.17872 0.86860 0.83265 0.75968 1.90761 1.13515 1.86956 1.49297 1.45959 1.10676 1.05646 1.75447 1.21042 0.95907 0.81503 0.97480 0.88873 1.21777 0.98254 0.93609 1.02611 1.21400 1.01041 0.96366 0.95964 1.21852 0.93493 0.82945 0.97316 0.92627 1.86519 1.76778 1.37653 1.36446 1.22234 0.99508 0.94808 1.02240 1.21868 1.00707 0.97255 0.96758 0.89365 0.88561 0.91444 0.86672 0.77527 1.17686 1.17973 0.79710 0.73580 0.82089 0.76654 0.90292 0.90973 0.90694 0.90505 0.77319 0.90674 0.91304 0.91558 0.90872 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.39 8.69 36.01 0.31 -0.08 16 2 C 0.08 0.27 5.98 -103.67 -0.62 -0.34 16 3 C -0.15 -0.39 6.16 -105.13 -0.65 -1.03 16 4 C -0.18 -0.01 5.57 -102.72 -0.57 -0.58 16 5 C -0.04 0.02 2.07 36.01 0.07 0.09 16 6 O -0.54 0.02 12.88 -35.23 -0.45 -0.44 16 7 Si 0.69 -1.53 30.76 -169.99 -5.23 -6.76 16 8 C 0.07 -0.16 10.44 -16.70 -0.17 -0.34 16 9 N -0.57 0.64 6.04 -12.12 -0.07 0.57 16 10 C 0.31 0.67 8.42 -155.71 -1.31 -0.64 16 11 N -0.50 -1.27 10.37 -11.96 -0.12 -1.39 16 12 C 0.18 0.17 10.67 -17.11 -0.18 -0.01 16 13 C -0.23 -0.54 5.89 -104.82 -0.62 -1.16 16 14 C 0.57 1.42 7.68 -12.41 -0.10 1.33 16 15 O -0.53 -2.88 13.16 5.30 0.07 -2.81 16 16 N -0.73 0.39 5.03 -54.81 -0.28 0.12 16 17 C 0.14 -0.05 2.45 -67.93 -0.17 -0.22 16 18 H 0.09 0.16 7.58 -51.93 -0.39 -0.24 16 19 C -0.12 0.25 5.39 -26.73 -0.14 0.10 16 20 C -0.11 0.07 5.57 -26.73 -0.15 -0.08 16 21 C 0.10 -0.05 3.47 -26.73 -0.09 -0.14 16 22 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 23 O -0.57 -0.53 13.32 -35.23 -0.47 -1.00 16 24 C -0.15 0.08 5.54 -26.73 -0.15 -0.06 16 25 C -0.13 0.04 5.49 -26.73 -0.15 -0.11 16 26 H 0.09 0.35 8.14 -51.93 -0.42 -0.08 16 27 H 0.10 0.41 5.95 -51.93 -0.31 0.10 16 28 H 0.07 0.17 5.05 -51.93 -0.26 -0.10 16 29 H 0.12 0.06 6.03 -51.93 -0.31 -0.25 16 30 H 0.38 -1.50 8.70 45.56 0.40 -1.11 16 31 H -0.25 -0.36 7.11 56.52 0.40 0.05 16 32 H -0.26 -0.05 7.11 56.52 0.40 0.36 16 33 H 0.19 -1.18 6.35 -52.48 -0.33 -1.52 16 34 H 0.43 -1.58 8.96 -40.82 -0.37 -1.94 16 35 H 0.16 -0.43 6.43 -52.49 -0.34 -0.77 16 36 H 0.40 -1.26 6.68 -40.82 -0.27 -1.53 16 37 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 38 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 39 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 40 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 41 H 0.38 -1.08 9.08 45.56 0.41 -0.67 16 42 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 43 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 44 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 45 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 LS Contribution 357.49 15.07 5.39 5.39 Total: 0.00 -10.53 357.49 -11.05 -21.58 By element: Atomic # 1 Polarization: -6.77 SS G_CDS: -5.20 Total: -11.98 kcal Atomic # 6 Polarization: 1.40 SS G_CDS: -4.68 Total: -3.28 kcal Atomic # 7 Polarization: -0.24 SS G_CDS: -0.47 Total: -0.71 kcal Atomic # 8 Polarization: -3.39 SS G_CDS: -0.85 Total: -4.24 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: -5.23 Total: -6.76 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -10.53 -11.05 -21.58 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11353598_12890568.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.087 kcal (2) G-P(sol) polarization free energy of solvation -10.526 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.613 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.051 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.577 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.663 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds